Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0926
(723 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 150 2e-37
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 148 9e-37
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 135 7e-33
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 116 3e-27
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 110 2e-25
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 96 5e-21
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 81 2e-16
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 66 4e-12
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 28 1.6
SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces pom... 27 2.1
SPCC550.10 |meu8||betaine aldehyde dehydrogenase |Schizosaccharo... 27 2.7
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 27 2.7
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 27 3.6
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.6
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.6
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 6.3
SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr... 25 8.3
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 8.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 8.3
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 150 bits (363), Expect = 2e-37
Identities = 66/93 (70%), Positives = 77/93 (82%)
Frame = +2
Query: 5 EGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 184
+GFGY+GSIFHRVIPNFM+QGGD T +GTGGKSIYG++F DENF L H PG+LSMANA
Sbjct: 67 KGFGYEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANA 126
Query: 185 GADTNGSQFFITTVKTSWLDGRNVSLGMLLKAW 283
G D+NGSQFFITTVKT WLDG +V G +L +
Sbjct: 127 GPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGY 159
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 148 bits (358), Expect = 9e-37
Identities = 66/87 (75%), Positives = 72/87 (82%)
Frame = +2
Query: 5 EGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 184
+G+GY GS FHRVIP FMLQGGDFT NGTGGKSIYG KF DENF LKH PG+LSMANA
Sbjct: 42 KGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANA 101
Query: 185 GADTNGSQFFITTVKTSWLDGRNVSLG 265
G +TNGSQFFITTV T WLDG++V G
Sbjct: 102 GPNTNGSQFFITTVVTPWLDGKHVVFG 128
Score = 46.4 bits (105), Expect = 4e-06
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQI 366
VFG V EGM+VVK++E+ G SG T RI I CG +
Sbjct: 126 VFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 135 bits (326), Expect = 7e-33
Identities = 63/87 (72%), Positives = 71/87 (81%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKGS FHRVI NFMLQGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +T
Sbjct: 51 YKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNT 110
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFITTV T LDG++V G +++
Sbjct: 111 NGSQFFITTVPTPHLDGKHVVFGKVIQ 137
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCG 360
VFG V++G V+ IE ++ + I++CG
Sbjct: 131 VFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 116 bits (280), Expect = 3e-27
Identities = 52/91 (57%), Positives = 69/91 (75%), Gaps = 1/91 (1%)
Frame = +2
Query: 14 GYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGA 190
GYK S FHR+I FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG
Sbjct: 54 GYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGK 113
Query: 191 DTNGSQFFITTVKTSWLDGRNVSLGMLLKAW 283
D+NG QFFITTV +LDG++V G +++ +
Sbjct: 114 DSNGCQFFITTVPCDFLDGKHVVFGEVIEGY 144
Score = 32.7 bits (71), Expect = 0.055
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 229 DLLAGWQKCVFGNVVEGMEVVKQIE-TFGXQSGKTSKRIXIKDCGQI 366
D L G + VFG V+EG ++VK+IE T + + + I +CG++
Sbjct: 128 DFLDG-KHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 110 bits (264), Expect = 2e-25
Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +2
Query: 5 EGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 181
EG+ Y G IFHRVIP+F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMAN
Sbjct: 35 EGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMAN 92
Query: 182 AGADTNGSQFFITTVKTSWLDGRNVSLGMLL 274
AG +TN SQFFIT T WLDG++ G ++
Sbjct: 93 AGPNTNSSQFFITLAPTPWLDGKHTIFGRVV 123
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 95.9 bits (228), Expect = 5e-21
Identities = 47/80 (58%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 193
Y +IFHR+I NFM+QGGD +GTGG+SI+ FEDE + LKH P +SMAN+G +
Sbjct: 491 YDNTIFHRIIKNFMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPN 549
Query: 194 TNGSQFFITTVKTSWLDGRN 253
TNGSQFFITT T WLDG++
Sbjct: 550 TNGSQFFITTDLTPWLDGKH 569
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 80.6 bits (190), Expect = 2e-16
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGAD 193
Y+ +IFHR I FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +
Sbjct: 312 YRNTIFHRNIARFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKN 370
Query: 194 TNGSQFFITTVKTSWLDGRNVSLGMLL 274
TNGSQFFI LD ++ G ++
Sbjct: 371 TNGSQFFILYGPAKHLDNKHTIFGRVV 397
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 66.5 bits (155), Expect = 4e-12
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +2
Query: 5 EGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENF-TLKHTGPGVLSMAN 181
EG+ Y G+I HRV+P F++QGGD T G GG+SIYG F E L+ G++ MA
Sbjct: 46 EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMAC 103
Query: 182 AGADTNGSQFFITTVKTSWLDGRNVSLGMLL 274
+ N SQFFIT T +G+ G ++
Sbjct: 104 TENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +3
Query: 18 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 170
+RA S++S I KE +P+ITA SP +A S + ISP + + +S
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAC30D11.07 |nth1||DNA endonuclease III|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 355
Score = 27.5 bits (58), Expect = 2.1
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 524 LGIGINFHAY**CSLLHFC 580
+GIG++ H + C+LLH+C
Sbjct: 156 VGIGVDVHVHRICNLLHWC 174
>SPCC550.10 |meu8||betaine aldehyde dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 500
Score = 27.1 bits (57), Expect = 2.7
Identities = 22/68 (32%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
Frame = +2
Query: 74 FTN---HNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWLD 244
FTN HN + I+G + F HT L +AN GS F T KT
Sbjct: 390 FTNVQTHNKIWREEIFGPVLAVKTF---HTNEEALELANDSEYGLGSGVFSTNPKTLEFF 446
Query: 245 GRNVSLGM 268
N+ GM
Sbjct: 447 SNNIEAGM 454
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 27.1 bits (57), Expect = 2.7
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -1
Query: 342 DSLRGLPRLXAKGLNLLDNFHAFNNIPKDTFLPSSQEVLTVVM 214
DS L K + LD H FN +D FLP ++ L ++
Sbjct: 167 DSQNYLTLTGRKTIIFLDEVHRFNRAQQDIFLPMVEKGLVTLI 209
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 26.6 bits (56), Expect = 3.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -1
Query: 546 WKLMPIPSSLHQYNILLNNWNDPYFI*IILYWEGIFIYQED 424
WK + +P +NI++ DPY + + L EGIF ED
Sbjct: 883 WKRLEVPFEKTLWNIVVA---DPYLLTLKLTAEGIFKQLED 920
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 199 WFPVLHHHC 225
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +3
Query: 3 TRASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 152
T S+ S +S+PI+ TS + T++ P++ S T SPL T
Sbjct: 231 TSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 6.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 71 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 217
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPBC29A3.01 |||heavy metal ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 904
Score = 25.4 bits (53), Expect = 8.3
Identities = 11/37 (29%), Positives = 19/37 (51%)
Frame = -1
Query: 360 TTVFDXDSLRGLPRLXAKGLNLLDNFHAFNNIPKDTF 250
T VFD + +L ++++DN +IPK+ F
Sbjct: 525 TVVFDKTGTLTVGKLSVTDISIVDNLEELLDIPKNIF 561
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 25.4 bits (53), Expect = 8.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -2
Query: 257 THFCHPARR 231
THFCHP RR
Sbjct: 900 THFCHPTRR 908
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 8.3
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +3
Query: 3 TRASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASSP 173
T+ + TR + VSS + K+ T+ ++ PS++ +P+S+ ASSP
Sbjct: 437 TQPASTRVQTTTVSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSSSSASSP 493
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,018,113
Number of Sequences: 5004
Number of extensions: 62244
Number of successful extensions: 180
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 339215786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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