Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0926
(723 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 153 1e-37
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 150 1e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 150 1e-36
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 150 1e-36
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 149 1e-36
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 149 1e-36
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 148 4e-36
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 146 1e-35
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 141 4e-34
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 141 4e-34
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 124 8e-29
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 124 8e-29
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 120 1e-27
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 120 1e-27
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 111 5e-25
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 101 4e-22
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 100 2e-21
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 89 3e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 85 4e-17
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 84 8e-17
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 84 1e-16
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 55 5e-08
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 54 1e-07
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 30 1.8
At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar ... 30 1.8
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 7.2
At3g20020.1 68416.m02533 protein arginine N-methyltransferase fa... 28 7.2
At5g42600.1 68418.m05186 pentacyclic triterpene synthase, putati... 27 9.5
At3g09000.1 68416.m01053 proline-rich family protein 27 9.5
At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C... 27 9.5
At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C... 27 9.5
At1g03590.1 68414.m00339 protein phosphatase 2C family protein /... 27 9.5
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 153 bits (370), Expect = 1e-37
Identities = 67/92 (72%), Positives = 78/92 (84%)
Frame = +2
Query: 11 FGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 190
+GYKGS FHR+I +FM+QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG
Sbjct: 137 YGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGP 196
Query: 191 DTNGSQFFITTVKTSWLDGRNVSLGMLLKAWK 286
+TNGSQFFI TVKTSWLD ++V G +++ K
Sbjct: 197 NTNGSQFFICTVKTSWLDNKHVVFGQVIEGMK 228
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKR-IXIKDCGQI 366
VFG V+EGM++V+ +E+ ++ K+ I CG++
Sbjct: 219 VFGQVIEGMKLVRTLESQETRAFDVPKKGCRIYACGEL 256
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 150 bits (363), Expect = 1e-36
Identities = 67/86 (77%), Positives = 74/86 (86%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKGS FHR+IP+FMLQGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG DT
Sbjct: 86 YKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDT 145
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLL 274
NGSQFFITTV TSWLDGR+V G ++
Sbjct: 146 NGSQFFITTVTTSWLDGRHVVFGKVV 171
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQI 366
VFG VV GM+VV ++E G QSG ++ I D G++
Sbjct: 166 VFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 150 bits (363), Expect = 1e-36
Identities = 65/91 (71%), Positives = 76/91 (83%)
Frame = +2
Query: 5 EGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANA 184
+GFGYKGS FHRVI +FM+QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANA
Sbjct: 133 KGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANA 192
Query: 185 GADTNGSQFFITTVKTSWLDGRNVSLGMLLK 277
G +TNGSQFFI T+KTSWLDGR+V G +++
Sbjct: 193 GPNTNGSQFFICTIKTSWLDGRHVVFGQVIE 223
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSG-KTSKRIXIKDCGQI 366
VFG V+EGMEVVK IE G + K++ I DCGQ+
Sbjct: 217 VFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 150 bits (363), Expect = 1e-36
Identities = 66/87 (75%), Positives = 76/87 (87%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKGS FHR+IP+FM+QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G DT
Sbjct: 83 YKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDT 142
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFITTV TSWLDGR+V G +++
Sbjct: 143 NGSQFFITTVTTSWLDGRHVVFGKVVQ 169
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQI 366
VFG VV+GM+VV +IE G QSG ++ I D G++
Sbjct: 163 VFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 149 bits (362), Expect = 1e-36
Identities = 66/87 (75%), Positives = 76/87 (87%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
+KGS FHRVIPNFM QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA+T
Sbjct: 55 FKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANT 114
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFI TVKT WLDG++V G +++
Sbjct: 115 NGSQFFICTVKTDWLDGKHVVFGQVVE 141
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/38 (55%), Positives = 28/38 (73%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQIA 369
VFG VVEG++VVK IE G SGK +K + + DCGQ++
Sbjct: 135 VFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 149 bits (362), Expect = 1e-36
Identities = 66/87 (75%), Positives = 75/87 (86%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
+KGS FHRVIPNFM QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA+T
Sbjct: 56 FKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANT 115
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFI TVKT WLDG++V G +++
Sbjct: 116 NGSQFFICTVKTDWLDGKHVVFGQVVE 142
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQIA 369
VFG VVEG++VVK IE G SGK +K + I DCG+I+
Sbjct: 136 VFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 148 bits (358), Expect = 4e-36
Identities = 64/89 (71%), Positives = 75/89 (84%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKGS FHR+IP FM QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +T
Sbjct: 55 YKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNT 114
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLKAW 283
NGSQFFI T KTSWLDG++V G ++ +
Sbjct: 115 NGSQFFICTEKTSWLDGKHVVFGKVVDGY 143
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQI 366
VFG VV+G VVK +E G G S+R+ I+DCG++
Sbjct: 135 VFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 146 bits (355), Expect = 1e-35
Identities = 65/87 (74%), Positives = 75/87 (86%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKGS FHRVIP FM QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA+T
Sbjct: 56 YKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANT 115
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFI T KTSWLDG++V G +++
Sbjct: 116 NGSQFFICTEKTSWLDGKHVVFGQVVE 142
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQIA 369
VFG VVEG+ VV+ IE G SG+TSK + I DCGQI+
Sbjct: 136 VFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 141 bits (342), Expect = 4e-34
Identities = 63/87 (72%), Positives = 73/87 (83%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
+KGSIFHRVIP FM QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G +T
Sbjct: 55 FKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNT 114
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFI T KTSWLDG++V G ++K
Sbjct: 115 NGSQFFICTDKTSWLDGKHVVFGQVVK 141
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/38 (60%), Positives = 29/38 (76%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQIA 369
VFG VV+G++VVK IE G SGKTSK + I DCGQ++
Sbjct: 135 VFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 141 bits (342), Expect = 4e-34
Identities = 62/86 (72%), Positives = 72/86 (83%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
+KGS FHR+IP FM+QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G D+
Sbjct: 110 FKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDS 169
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLL 274
NGSQFFITTV TSWLDG +V G +L
Sbjct: 170 NGSQFFITTVTTSWLDGHHVVFGKVL 195
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQIA 369
VFG V+ GMEVV++IE G SG + I G+++
Sbjct: 190 VFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVS 227
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 124 bits (298), Expect = 8e-29
Identities = 55/87 (63%), Positives = 67/87 (77%)
Frame = +2
Query: 14 GYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGAD 193
GYK FHRVI +FM+Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +
Sbjct: 80 GYKECQFHRVIKDFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPN 139
Query: 194 TNGSQFFITTVKTSWLDGRNVSLGMLL 274
TNG QFFIT K WLD ++V G +L
Sbjct: 140 TNGCQFFITCAKCDWLDNKHVVFGRVL 166
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 124 bits (298), Expect = 8e-29
Identities = 56/87 (64%), Positives = 70/87 (80%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKG+ FHRVI FM+QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G +T
Sbjct: 56 YKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNT 115
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFITT +TS LDG++V G + K
Sbjct: 116 NGSQFFITTTRTSHLDGKHVVFGRVTK 142
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGK-TSKRIXIKDCGQI 366
VFG V +GM VV+ IE + S+ + I DCG+I
Sbjct: 136 VFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 120 bits (288), Expect = 1e-27
Identities = 55/87 (63%), Positives = 65/87 (74%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
+KGS FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +T
Sbjct: 59 FKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNT 118
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFI + LDG++V G +++
Sbjct: 119 NGSQFFILFKRQPHLDGKHVVFGKVVE 145
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQ 363
VFG VVEGM V+K++E G GK + + I DCG+
Sbjct: 139 VFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 120 bits (288), Expect = 1e-27
Identities = 55/87 (63%), Positives = 65/87 (74%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
+KGS FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +T
Sbjct: 59 FKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNT 118
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFI + LDG++V G +++
Sbjct: 119 NGSQFFILFKRQPHLDGKHVVFGKVVE 145
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQ 363
VFG VVEGM V+K++E G GK + + I DCG+
Sbjct: 139 VFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 111 bits (267), Expect = 5e-25
Identities = 47/87 (54%), Positives = 65/87 (74%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKG+ FHR+I F++QGGD + +G SIYG F DENF ++H+ G+++MAN G D+
Sbjct: 98 YKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDS 157
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
NGSQFFITTVK SWL+G +V LG +++
Sbjct: 158 NGSQFFITTVKASWLEGEHVVLGKVIQ 184
Score = 31.9 bits (69), Expect = 0.44
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIET-FGXQSGKTSKRIXIKDCGQI 366
V G V++GM+ V IE G SGK K++ I D G+I
Sbjct: 178 VLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 101 bits (243), Expect = 4e-22
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 193
Y +FHR++ +F++QGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +
Sbjct: 46 YDNVLFHRIVKDFIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPN 104
Query: 194 TNGSQFFITTVKTSWLDGRNVSLGMLLK 277
TNGSQFFIT LDG++ G + +
Sbjct: 105 TNGSQFFITLAPQPSLDGKHTIFGRVCR 132
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 99.5 bits (237), Expect = 2e-21
Identities = 49/88 (55%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 193
Y +FHRVI FM+Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +
Sbjct: 512 YDNHLFHRVIRGFMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPN 570
Query: 194 TNGSQFFITTVKTSWLDGRNVSLGMLLK 277
TNGSQFFITTV T WLD ++ G ++K
Sbjct: 571 TNGSQFFITTVATPWLDNKHTVFGRVVK 598
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 89.0 bits (211), Expect = 3e-18
Identities = 46/91 (50%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 193
Y G+IFHR I FM+QGGD G GG SI+G KF DE +LKH G+LSMAN+G +
Sbjct: 37 YDGTIFHRNIKGFMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPN 95
Query: 194 TNGSQFFITTVKTSWLDGRNVSLGMLLKAWK 286
TNGSQFFIT K L+G G ++ ++
Sbjct: 96 TNGSQFFITYAKQPHLNGLYTIFGKVIHGFE 126
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 85.0 bits (201), Expect = 4e-17
Identities = 42/87 (48%), Positives = 51/87 (58%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
YKGS FHR++ Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A D
Sbjct: 59 YKGSFFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDK 118
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
GS F IT LD NV G L++
Sbjct: 119 FGSHFHITFRPNQQLDRNNVVFGKLIQ 145
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +1
Query: 256 VFGNVVEGMEVVKQIETFGXQSGKTSKRIXIKDCGQ 363
VFG +++G E++K+IE G + GK + + I CG+
Sbjct: 139 VFGKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGE 174
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 84.2 bits (199), Expect = 8e-17
Identities = 44/89 (49%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Frame = +2
Query: 5 EGFGYKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 181
EG+ + +IFHRVIP F++QGGD T +GTGG SIYG F DE + L+ + G+++MAN
Sbjct: 46 EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMAN 103
Query: 182 AGA-DTNGSQFFITTVKTSWLDGRNVSLG 265
A + ++NGSQFF T K WLD ++ G
Sbjct: 104 ASSPNSNGSQFFFTLDKCDWLDKKHTIFG 132
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 83.8 bits (198), Expect = 1e-16
Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGAD 193
Y G FHR I NFM+QGGD T G GG+SI+G F+DE N L H+G GV+SMAN+G
Sbjct: 380 YNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMANSGPH 438
Query: 194 TNGSQFFITTVKTSWLDGRNVSLG 265
TNGSQFF+ + L+ ++ G
Sbjct: 439 TNGSQFFVLYKSATHLNYKHTVFG 462
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 54.8 bits (126), Expect = 5e-08
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIY----GNK---FEDE-NFTLKHTGPGVLS 172
Y G +FH V +F Q GD T G GG SIY G + ++DE + LKH+ G ++
Sbjct: 37 YNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVA 95
Query: 173 MANAGADTNGSQFFIT-TVKTSWLDGRNVSLGMLLKAW 283
MA+ G + N SQF+ T +LDG++ G + + +
Sbjct: 96 MASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGF 133
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 54.0 bits (124), Expect = 1e-07
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKH-TGPGVLSMANAGAD 193
YKGS F ++P+ M GGD N + I+ + +DE F L H GPG++SM AD
Sbjct: 55 YKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISM----AD 106
Query: 194 TNGSQFFITTVKTS-WLDGRNVSLGMLLK 277
+NGSQF I +DG +V +G +++
Sbjct: 107 SNGSQFQIHMKDYGLQVDGDHVVIGKVVE 135
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 29.9 bits (64), Expect = 1.8
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +2
Query: 17 YKGSIFHRVIPNFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADT 196
+KG +F RV+ +F++Q GD + ++ + +LKH ++ A +
Sbjct: 114 FKGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQ 169
Query: 197 NGSQFFITTVKTSWLDGRNVSLGMLLK 277
G +FFI + + L+ + G + K
Sbjct: 170 GGFEFFIVSAQIKDLNEKLTVFGRVSK 196
>At1g78955.1 68414.m09205 beta-amyrin synthase, putative similar to
beta-Amyrin Synthase GI:3688600 from [Panax ginseng] and
GI:8918271 from [Pisum sativum]
Length = 769
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1
Query: 279 AFNNIPKDTFLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDF 100
++ + PK ++PS E +V +W + A ER P P+ K ++ L DF
Sbjct: 661 SYLSCPKKRYIPSEGERSNLVQTSWAMMGLLHAGQAERDPSPLHRAAKLLINSQLENGDF 720
Query: 99 P 97
P
Sbjct: 721 P 721
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 15 VTRAPFSIVSSPISCCKEGTSPTITALG 98
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At3g20020.1 68416.m02533 protein arginine N-methyltransferase
family protein similar to SP|Q96LA8 Protein arginine
N-methyltransferase 6 (EC 2.1.1.-) {Homo sapiens}
Length = 435
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 42 SSPISCCKEGTSPTITALGES---PSTAISLKTRISPLSTLDLASSP 173
S P S + TS T A G S PS ++ K R +P L L++SP
Sbjct: 327 SGPASSPAKNTSETSIASGSSSISPSGEVNQKKRTNPSDALVLSTSP 373
>At5g42600.1 68418.m05186 pentacyclic triterpene synthase, putative
similar to pentacyclic triterpene synthase [gi:6650207]
[PMID: 11247608]
Length = 761
Score = 27.5 bits (58), Expect = 9.5
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -1
Query: 264 PKDTFLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSSNLLP*MDFP 97
P ++PS V VV +V MER P PV K ++ L DFP
Sbjct: 667 PNKKYIPSKGNVTNVVNTGQAMMVLLIGGQMERDPSPVHRAAKVLINSQLDIGDFP 722
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 27.5 bits (58), Expect = 9.5
Identities = 22/61 (36%), Positives = 28/61 (45%)
Frame = +3
Query: 3 TRASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLSTLDLASSPWLM 182
TR T SIVSS SPT+ +L ++PS SP TL+ +S PW
Sbjct: 245 TRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAPSRG------TSPSPTLN-SSRPWKP 297
Query: 183 P 185
P
Sbjct: 298 P 298
>At3g05640.2 68416.m00628 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 219 VMKNWEPLVSAPALAMERTPGPVCLR 142
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At3g05640.1 68416.m00627 protein phosphatase 2C, putative / PP2C,
putative similar to protein phosphatase-2C GB:AAC36699
from [Mesembryanthemum crystallinum]
Length = 358
Score = 27.5 bits (58), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 219 VMKNWEPLVSAPALAMERTPGPVCLR 142
V + W+P+ +P LAM R G C++
Sbjct: 242 VHRVWQPVDESPGLAMSRAFGDYCIK 267
>At1g03590.1 68414.m00339 protein phosphatase 2C family protein /
PP2C family protein similar to protein phosphatase-2C;
PP2C (GI:3643088) [Mesembryanthemum crystallinum];
contains Pfam PF00481 : Protein phosphatase 2C domain;
Length = 447
Score = 27.5 bits (58), Expect = 9.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 219 VMKNWEPLVSAPALAMERTPGPVCLR 142
V + W P +AP LAM R G CL+
Sbjct: 240 VSRVWLPFDNAPGLAMARAFGDFCLK 265
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,753,528
Number of Sequences: 28952
Number of extensions: 332870
Number of successful extensions: 885
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 876
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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