Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0925
(859 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70; Eukaryo... 101 2e-20
UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96; Eukaryo... 101 2e-20
UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brug... 101 3e-20
UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1; ... 92 1e-17
UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2; Scleroti... 92 1e-17
UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1, pu... 90 6e-17
UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n... 85 2e-15
UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2; Ol... 82 2e-14
UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1; Encephal... 80 8e-14
UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1; L... 79 2e-13
UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia b... 78 2e-13
UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1, pu... 77 8e-13
UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL... 75 2e-12
UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2; Cryptomo... 74 4e-12
UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiell... 70 7e-11
UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5; E... 70 9e-11
UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2; Endopterygot... 65 2e-09
UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3; Trich... 62 1e-08
UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal ... 52 1e-05
UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal ... 45 0.002
UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lambli... 45 0.003
UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8; Archaea... 43 0.011
UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13; Euryar... 40 0.080
UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9; Archaea... 40 0.11
UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2; ... 38 0.25
UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;... 37 0.75
UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3; ... 37 0.75
UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2; Euryarc... 36 1.3
UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;... 36 1.7
UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1; ... 36 1.7
UniRef50_Q5NB71 Cluster: Putative uncharacterized protein P0431F... 36 1.7
UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2; Thermoprotei... 36 1.7
UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe gri... 35 2.3
UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3; Archaea... 35 2.3
UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1; ... 35 3.0
UniRef50_UPI000058888F Cluster: PREDICTED: similar to ENSANGP000... 34 5.3
UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;... 33 7.0
UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;... 33 9.2
UniRef50_Q9DDF7 Cluster: Homeodomain protein DlxC; n=5; Vertebra... 33 9.2
>UniRef50_P36578 Cluster: 60S ribosomal protein L4; n=70;
Eukaryota|Rep: 60S ribosomal protein L4 - Homo sapiens
(Human)
Length = 427
Score = 101 bits (242), Expect = 2e-20
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 5e-06
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>UniRef50_P09180 Cluster: 60S ribosomal protein L4; n=96;
Eukaryota|Rep: 60S ribosomal protein L4 - Drosophila
melanogaster (Fruit fly)
Length = 401
Score = 101 bits (242), Expect = 2e-20
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 62 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWHRKVN 119
Score = 66.9 bits (156), Expect = 6e-10
Identities = 33/58 (56%), Positives = 41/58 (70%)
Frame = +2
Query: 74 MSLSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
MSL ARPLVSVY+EK+E + LP VF APIRP +VN+VH + +N+RQ Y VS
Sbjct: 1 MSLGNARPLVSVYTEKNEPAKDKNICLPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVS 58
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +2
Query: 509 IIXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQR 646
+I + E PLVV+ +VQ++ KTKQ VI L W+DI KVYKSQR
Sbjct: 146 VIDGVSEFPLVVSDEVQKVQKTKQAVIFLRRLKIWADIQKVYKSQR 191
>UniRef50_Q4U6T4 Cluster: SL3; n=1; Brugia malayi|Rep: SL3 - Brugia
malayi (Filarial nematode worm)
Length = 306
Score = 101 bits (241), Expect = 3e-20
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 176 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKVFRRWHRRVN 233
>UniRef50_Q0U8Q3 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 349
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/48 (83%), Positives = 41/48 (85%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
GHQTS ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRM P K
Sbjct: 35 GHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTK 82
>UniRef50_A7E7X3 Cluster: 60S ribosomal protein L4; n=2;
Sclerotiniaceae|Rep: 60S ribosomal protein L4 -
Sclerotinia sclerotiorum 1980
Length = 373
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/48 (83%), Positives = 41/48 (85%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
GHQTS ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCR GRM P K
Sbjct: 58 GHQTSAESWGTGRAVARIPRVSGGGTHRAGQAAFGNMCRSGRMFAPTK 105
Score = 53.6 bits (123), Expect = 6e-06
Identities = 28/53 (52%), Positives = 31/53 (58%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
+RP VSV S T G PLP VF +PIRP +V VH M KN RQ Y VS
Sbjct: 3 SRPTVSVLSADG-TATGTTIPLPKVFTSPIRPDIVQTVHTGMAKNKRQPYAVS 54
>UniRef50_Q4XUM2 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L4/L1, putative - Plasmodium chabaudi
Length = 411
Score = 90.2 bits (214), Expect = 6e-17
Identities = 39/50 (78%), Positives = 42/50 (84%)
Frame = +1
Query: 250 GGGHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
G G++TS ESWGTGRAVARIPRV GGGTHR+GQ AFGNMCRGG M P K
Sbjct: 57 GAGYETSAESWGTGRAVARIPRVPGGGTHRAGQAAFGNMCRGGGMFNPTK 106
>UniRef50_A3FPV6 Cluster: 60S ribosomal protein-like, putative; n=4;
Cryptosporidium|Rep: 60S ribosomal protein-like,
putative - Cryptosporidium parvum Iowa II
Length = 394
Score = 85.4 bits (202), Expect = 2e-15
Identities = 39/58 (67%), Positives = 40/58 (68%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQ S ESWGTGRAVARIPRV GT RSGQGAFGNMCRGG M P K +N
Sbjct: 60 GHQHSAESWGTGRAVARIPRVSASGTSRSGQGAFGNMCRGGHMFSPNKTYRRFHRKIN 117
Score = 50.0 bits (114), Expect = 8e-05
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARP+VSV+ T ++ PLP VF +P+R LV V +M KN RQ Y VS
Sbjct: 1 MTFARPIVSVFPSNDSTKATSSIPLPTVFVSPLRHDLVRYVFTNMSKNKRQAYGVS 56
>UniRef50_Q3SEA6 Cluster: Ribosomal protein L4, putative; n=2;
Oligohymenophorea|Rep: Ribosomal protein L4, putative -
Paramecium tetraurelia
Length = 406
Score = 81.8 bits (193), Expect = 2e-14
Identities = 39/58 (67%), Positives = 39/58 (67%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
G Q S ESWGTGRAVARIPRV G GTHRSGQ AFGN CR GRM P K VN
Sbjct: 60 GMQHSAESWGTGRAVARIPRVSGSGTHRSGQAAFGNQCRKGRMSLPIKVWRRWHRRVN 117
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 95 PLVSVYSEKSET-VQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVSXE 253
PLVSV+S T V PLP VF PIRP +V+ VH ++ KN RQ + V+ +
Sbjct: 5 PLVSVFSADDSTKVTAKHIPLPAVFQTPIRPDIVSFVHTNIAKNRRQAHAVNPQ 58
>UniRef50_Q8SRC2 Cluster: 60S RIBOSOMAL PROTEIN L4; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L4 -
Encephalitozoon cuniculi
Length = 335
Score = 79.8 bits (188), Expect = 8e-14
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
G Q S ESWGTGRA+AR+PRV+GGGT R+GQGAF N CR GRM P K
Sbjct: 56 GMQHSAESWGTGRAIARVPRVKGGGTRRAGQGAFANFCRKGRMAHPTK 103
>UniRef50_Q4FXU6 Cluster: Ribosomal protein L1a, putative; n=1;
Leishmania major strain Friedlin|Rep: Ribosomal protein
L1a, putative - Leishmania major strain Friedlin
Length = 432
Score = 78.6 bits (185), Expect = 2e-13
Identities = 35/48 (72%), Positives = 36/48 (75%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
G S SWGTGRAVARIPR+ GGGT SG GAFGNMCRGGRM P K
Sbjct: 58 GMNHSAHSWGTGRAVARIPRISGGGTSTSGAGAFGNMCRGGRMFAPTK 105
Score = 59.7 bits (138), Expect = 9e-08
Identities = 31/53 (58%), Positives = 36/53 (67%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
ARP VSVYS S++V G PLP VF APIR +V VH +M KNSRQ Y V+
Sbjct: 3 ARPSVSVYSASSDSVVGTC-PLPAVFTAPIRSDIVKFVHTNMAKNSRQAYAVN 54
Score = 33.9 bits (74), Expect = 5.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I +PE+PLVV +Q KTK+ + +A+ A D+ +V S+ +
Sbjct: 143 IGNVPEVPLVVEDSIQGYEKTKEAMAFLKAIAAIDDVNRVNDSREI 188
>UniRef50_A7AUF0 Cluster: Ribosomal protein RPL4A; n=1; Babesia
bovis|Rep: Ribosomal protein RPL4A - Babesia bovis
Length = 360
Score = 78.2 bits (184), Expect = 2e-13
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
G+QTS SWGTGRA+AR+PRV+GGGTHR+GQ A+ N CR G M P + VN
Sbjct: 58 GYQTSARSWGTGRAMARVPRVKGGGTHRAGQAAYANFCRAGGMYAPTRVWRRWHRKVN 115
>UniRef50_Q4UES5 Cluster: 60S ribosomal subunit protein L4/L1,
putative; n=2; Theileria|Rep: 60S ribosomal subunit
protein L4/L1, putative - Theileria annulata
Length = 426
Score = 76.6 bits (180), Expect = 8e-13
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
G+QTS SWGTGRA++R PRV+GGGTHRSGQ A+ N CR G M P + +N
Sbjct: 58 GYQTSARSWGTGRALSRTPRVKGGGTHRSGQAAYANFCRAGGMFAPTRTWRHWHRKIN 115
Score = 48.4 bits (110), Expect = 2e-04
Identities = 25/54 (46%), Positives = 34/54 (62%)
Frame = +2
Query: 86 VARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
V RP+VSV+S +E G+ +P VF P+R LV+ VH +M KN RQ Y +S
Sbjct: 2 VHRPVVSVFSVSTEKRMGST-IMPRVFSTPLRSDLVHYVHTNMSKNKRQAYAIS 54
>UniRef50_Q1KYM6 Cluster: RPL4; n=1; Streblomastix strix|Rep: RPL4 -
Streblomastix strix
Length = 492
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/58 (58%), Positives = 37/58 (63%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQ S ESWGTGRAVAR+PR+ G GT R+GQ AF N RGG M P K VN
Sbjct: 59 GHQHSAESWGTGRAVARVPRISGSGTSRNGQAAFANSARGGHMYSPLKVWRRWHRMVN 116
Score = 39.1 bits (87), Expect = 0.14
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I +PELPLVV+ V++I KTK+ V AL A D+ +S+R+
Sbjct: 144 IDNVPELPLVVSDDVEQIKKTKEAVKVLAALKASDDVKHSAESKRI 189
>UniRef50_Q98S44 Cluster: 60s ribosomal protein L1; n=2;
Cryptomonadaceae|Rep: 60s ribosomal protein L1 -
Guillardia theta (Cryptomonas phi)
Length = 255
Score = 74.1 bits (174), Expect = 4e-12
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXP 393
G TS SWGTGRAV+R+PRV G GTHRSGQGA N CRGGR+ P
Sbjct: 54 GMGTSAVSWGTGRAVSRVPRVPGSGTHRSGQGAIANFCRGGRIFNP 99
>UniRef50_Q3LWC7 Cluster: Ribosomal protein L4A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L4A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 278
Score = 70.1 bits (164), Expect = 7e-11
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = +1
Query: 238 LREXGGGHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM 384
++ G+Q S +SWG GR +ARIPR++G GT ++GQGA NMCRGGR+
Sbjct: 54 IKYNNSGNQVSAKSWGPGRGLARIPRIKGSGTRKAGQGALANMCRGGRL 102
>UniRef50_UPI0000499FAF Cluster: 60S ribosomal protein L4; n=5;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L4 - Entamoeba histolytica HM-1:IMSS
Length = 431
Score = 69.7 bits (163), Expect = 9e-11
Identities = 32/48 (66%), Positives = 35/48 (72%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
G Q S SWGTGRAVARIPR+ G G+ R+GQGAFGNM R G M P K
Sbjct: 59 GKQHSAISWGTGRAVARIPRISGSGSGRNGQGAFGNMTRKGHMFSPLK 106
Score = 40.3 bits (90), Expect = 0.061
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Frame = +2
Query: 512 IXKIPELPLVVAXK-VQEITKTKQXVIXPEALNAWSDILKVYKSQ 643
I +P++PLVV K + I KTKQ V + +NA+SD+LKV S+
Sbjct: 144 IAGVPQIPLVVNSKSISVIKKTKQAVYLLKKINAYSDVLKVIASK 188
Score = 37.5 bits (83), Expect = 0.43
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +2
Query: 89 ARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
+RP V++Y + + LP VF APIR +V+ V+ + KN+RQ VS
Sbjct: 3 SRPFVTIYDGITGEAEKTQVRLPAVFLAPIRGDVVHFVYRNQSKNTRQPEGVS 55
>UniRef50_Q5MGK5 Cluster: Ribosomal protein 23; n=2;
Endopterygota|Rep: Ribosomal protein 23 - Lonomia
obliqua (Moth)
Length = 274
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/51 (56%), Positives = 37/51 (72%)
Frame = +2
Query: 497 GXRXIIXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
G ++ + E+PLVV+ K+QEI KTKQ VI + AWSD+LKVYKSQRL
Sbjct: 4 GRGYVVDNVSEIPLVVSDKIQEINKTKQAVIFLRRIKAWSDVLKVYKSQRL 54
>UniRef50_A2E1Z6 Cluster: Ribosomal protein, putative; n=3;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 370
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/46 (56%), Positives = 32/46 (69%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXP 393
G + S SWGTGRA A +PRV G G++R+GQGA+ N CRGG P
Sbjct: 56 GKKVSAISWGTGRAKACVPRVNGSGSNRNGQGAYANFCRGGHRFNP 101
>UniRef50_UPI00005A24EF Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 253
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/46 (52%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KT++ V+ + L AW+DI KVY SQR+
Sbjct: 7 IGEVPELPLVVEDKVEGYKKTEEAVLLLKKLKAWNDIKKVYASQRM 52
>UniRef50_UPI00005A2ACC Cluster: PREDICTED: similar to ribosomal
protein L4; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L4 - Canis familiaris
Length = 248
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/25 (76%), Positives = 21/25 (84%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGG 330
G+QTS ESWGTGRA +PRVRGGG
Sbjct: 49 GYQTSAESWGTGRARGPMPRVRGGG 73
Score = 37.9 bits (84), Expect = 0.32
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2
Query: 551 KVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 98 KVEGYKKTKEEVLLLKKLKAWNDIKKVYASQRM 130
>UniRef50_Q7R0P2 Cluster: GLP_79_45017_44067; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_45017_44067 - Giardia lamblia
ATCC 50803
Length = 316
Score = 44.8 bits (101), Expect = 0.003
Identities = 23/46 (50%), Positives = 26/46 (56%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXP 393
G Q + SWG GRAVAR+PR G G GA+ N RGG M P
Sbjct: 55 GVQCTAHSWGPGRAVARLPRKHG------GIGAYANFARGGHMAHP 94
Score = 36.7 bits (81), Expect = 0.75
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 95 PLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
P V V+ V A P P VF P+RP ++N VH + K R Y VS
Sbjct: 3 PTVKVFGPTGTQV--AELPRPKVFNVPLRPDIINFVHTQLRKCLRTPYAVS 51
>UniRef50_Q9YFM1 Cluster: 50S ribosomal protein L4P; n=8;
Archaea|Rep: 50S ribosomal protein L4P - Aeropyrum
pernix
Length = 272
Score = 42.7 bits (96), Expect = 0.011
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = +1
Query: 205 RXYVQELEAALL---REXGGGHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG 375
R ++ E A L R+ G +TS S G GR VAR+PR++G S + A NM RG
Sbjct: 46 RAFLSEFTARLQPKGRDPMAGKRTSAVSLGVGRGVARVPRIKG-----SLRAALVNMARG 100
Query: 376 GRMXXPXK 399
GR P +
Sbjct: 101 GRAAHPPR 108
>UniRef50_Q8TY91 Cluster: 50S ribosomal protein L4P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanopyrus kandleri
Length = 260
Score = 39.9 bits (89), Expect = 0.080
Identities = 21/58 (36%), Positives = 27/58 (46%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
G +TS ESWG G VA +PRV+G +G+ A GG+ P VN
Sbjct: 53 GFRTSAESWGAGHGVAMVPRVKGRRHPAAGRAARVAQAVGGQKAHAPTPEKDWTQRVN 110
>UniRef50_Q8ZW51 Cluster: 50S ribosomal protein L4P; n=9;
Archaea|Rep: 50S ribosomal protein L4P - Pyrobaculum
aerophilum
Length = 283
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/50 (44%), Positives = 26/50 (52%)
Frame = +1
Query: 250 GGGHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
G G + S ES+G G +ARIPR +G R G F RGGR P K
Sbjct: 77 GAGKEHSCESFGVGLGIARIPRYKGSLWPR---GCFAPNTRGGRRAHPPK 123
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 509 IIXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDI 622
++ K+P LP+VV ++I + K+ EAL W D+
Sbjct: 160 VVEKVPSLPVVVVGDAEKINRAKEAKKLFEALGLWPDV 197
>UniRef50_Q4FXU7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major strain Friedlin
Length = 534
Score = 38.3 bits (85), Expect = 0.25
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 276 IMGYRTCCCPNSACPWWWYP*VRSGCLR*HVSWWTYVXPXEXXXXXXPSRQP 431
++G+R C SA W VR C+R HV WW +V E P QP
Sbjct: 117 LVGHRPRRCAYSAHQRRWNEHVRRRCVRQHVPWWPHVRADEDLPPLAPQDQP 168
>UniRef50_UPI0000EBE356 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 220
Score = 36.7 bits (81), Expect = 0.75
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +1
Query: 223 LEAALLREXGGGHQTSXESWGTGRAVARIPRVRGGGTHRSG 345
L A+ R GGG +T+ + G G AR+P RGG RSG
Sbjct: 100 LSASSGRAAGGGRETATRAGGGGPRSARVPGCRGGARSRSG 140
>UniRef50_A3C3B6 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 150
Score = 36.7 bits (81), Expect = 0.75
Identities = 22/47 (46%), Positives = 23/47 (48%)
Frame = +1
Query: 241 REXGGGHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 381
RE GGG Q SW TGRA A + R R GG R A N G R
Sbjct: 30 REGGGGAQ----SWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>UniRef50_Q2NFV7 Cluster: 50S ribosomal protein L4P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L4P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 259
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
G +T+ ES+G+GR A +PRV+G S + AF GGR P +
Sbjct: 54 GKRTTAESFGSGRGAAMVPRVKG-----SSKAAFVPQAIGGRKAHPPR 96
>UniRef50_UPI00015B4B32 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1628
Score = 35.5 bits (78), Expect = 1.7
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 358 RRHPDRTYGYHHHGHAEFGQQHVR-YP 281
R PD +G+HHHGH G HV YP
Sbjct: 181 RGAPDTRHGHHHHGHHNHGHHHVEPYP 207
>UniRef50_A6WDW7 Cluster: Putative uncharacterized protein; n=1;
Kineococcus radiotolerans SRS30216|Rep: Putative
uncharacterized protein - Kineococcus radiotolerans
SRS30216
Length = 366
Score = 35.5 bits (78), Expect = 1.7
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Frame = +1
Query: 148 APPVRIQXAHTSG-PGQ*CARXYVQELE----AALLREXGGGHQTSXESWGTGRAVARIP 312
APP + H G PG+ A V ++ L GGGHQ S + T A AR+
Sbjct: 68 APPASVWAVHVDGGPGERAALVLVDRVDDGGRRTELLAGGGGHQASLAAT-TPAAAARLG 126
Query: 313 RVRGGGTHRSG 345
+V G HR G
Sbjct: 127 QVLGEAAHRRG 137
>UniRef50_Q5NB71 Cluster: Putative uncharacterized protein
P0431F01.18; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
P0431F01.18 - Oryza sativa subsp. japonica (Rice)
Length = 320
Score = 35.5 bits (78), Expect = 1.7
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +1
Query: 301 ARIPRVRGGGTHRSGQGAFGNMCRGG 378
AR PR GGG HR GA G + RGG
Sbjct: 201 ARRPRAAGGGKHRGAHGANGGVARGG 226
>UniRef50_A0RVX5 Cluster: Ribosomal protein L4; n=2;
Thermoprotei|Rep: Ribosomal protein L4 - Cenarchaeum
symbiosum
Length = 271
Score = 35.5 bits (78), Expect = 1.7
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +1
Query: 286 TGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXK 399
TG ARI R++GGG R G+ RGGR P K
Sbjct: 65 TGHGQARIARMKGGGGRRRGEAGEVASIRGGRQAHPPK 102
>UniRef50_A4QZ10 Cluster: Predicted protein; n=2; Magnaporthe
grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
blast fungus) (Pyricularia grisea)
Length = 161
Score = 35.1 bits (77), Expect = 2.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -1
Query: 385 TYVHHDTCYRRHPDRTYGYHHHGHAEFGQQHVRYPMIRXWFGDHLLAH 242
+Y H + RH R+YG+ HH H + R P +R H AH
Sbjct: 90 SYYHQEVSPGRHRSRSYGHRHHHHHRHSRSRSRGPDVRV-VHSHTSAH 136
>UniRef50_Q9UXA6 Cluster: 50S ribosomal protein L4P; n=3;
Archaea|Rep: 50S ribosomal protein L4P - Sulfolobus
solfataricus
Length = 267
Score = 35.1 bits (77), Expect = 2.3
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +1
Query: 241 REXGGGHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXP 393
R+ G +TS ES+G +AR+PRV+ SG+ A GGR+ P
Sbjct: 55 RDPNAGKRTSAESFGINLGMARVPRVK-----NSGEAALAPNTVGGRLAFP 100
>UniRef50_A6NR78 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 448
Score = 34.7 bits (76), Expect = 3.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 373 HDTCYRRHPDRTYGYHHHGHAEFG 302
HD C+ H + +G+HHH HA G
Sbjct: 109 HDHCHEHHHEHEHGHHHHHHASPG 132
>UniRef50_UPI000058888F Cluster: PREDICTED: similar to
ENSANGP00000014064; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ENSANGP00000014064
- Strongylocentrotus purpuratus
Length = 300
Score = 33.9 bits (74), Expect = 5.3
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 373 HDTCYRRHPDRTYGYHHHGHAEFGQQH 293
H+ YR H + +HHHGH+ G H
Sbjct: 106 HERAYRPHSNSDGHHHHHGHSHHGHSH 132
>UniRef50_Q52PH1 Cluster: Golden2-like transcription factor; n=8;
Poaceae|Rep: Golden2-like transcription factor - Zea
mays (Maize)
Length = 469
Score = 33.5 bits (73), Expect = 7.0
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 374 PRHMLPKAP*PDLWVPPPR 318
PRH+ P+AP P W PPP+
Sbjct: 325 PRHLAPRAPPPPPWAPPPQ 343
>UniRef50_UPI0000F212F9 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 194
Score = 33.1 bits (72), Expect = 9.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 376 HHDTCYRRHPDRTYGYHHHGHAEFGQQ 296
HH + RH DR +G HHHG G +
Sbjct: 132 HHTRHHTRHHDRHHGRHHHGRHHHGHR 158
>UniRef50_Q9DDF7 Cluster: Homeodomain protein DlxC; n=5;
Vertebrata|Rep: Homeodomain protein DlxC - Petromyzon
marinus (Sea lamprey)
Length = 342
Score = 33.1 bits (72), Expect = 9.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 325 HHGHAEFGQQHVRYPMIRXWFGDH 254
HH H + Q H +YP + WFG H
Sbjct: 287 HHQHQQQQQLHAQYPPVGPWFGGH 310
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,668,150
Number of Sequences: 1657284
Number of extensions: 10342875
Number of successful extensions: 27223
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 24990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26914
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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