Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0925
(859 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 101 3e-21
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 101 3e-21
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 101 3e-21
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 101 3e-21
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 100 1e-20
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 130
Score = 65.7 bits (153), Expect = 2e-10
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = +2
Query: 65 SSXMSLSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCV 244
S +++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y V
Sbjct: 10 SPLSAMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAV 68
Query: 245 S 247
S
Sbjct: 69 S 69
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 158 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 203
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 101 bits (242), Expect = 3e-21
Identities = 46/58 (79%), Positives = 46/58 (79%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQTS ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 64.9 bits (151), Expect = 4e-10
Identities = 32/56 (57%), Positives = 40/56 (71%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++ ARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVS 55
Score = 54.0 bits (124), Expect = 7e-07
Identities = 25/46 (54%), Positives = 33/46 (71%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I ++PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 99.5 bits (237), Expect = 1e-20
Identities = 45/58 (77%), Positives = 45/58 (77%)
Frame = +1
Query: 256 GHQTSXESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMXXPXKPXXXXXXXVN 429
GHQT ESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRM P K VN
Sbjct: 59 GHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVN 116
Score = 66.9 bits (156), Expect = 9e-11
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFXAPIRPXLVNDVHXSMXKNSRQXYCVS 247
++VARPL+SVYSEK E+ G LP VF APIRP +VN VH ++ KN+RQ Y VS
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVS 55
Score = 52.8 bits (121), Expect = 2e-06
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +2
Query: 512 IXKIPELPLVVAXKVQEITKTKQXVIXPEALNAWSDILKVYKSQRL 649
I + PELPLVV KV+ KTK+ V+ + L AW+DI KVY SQR+
Sbjct: 144 IEEFPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYASQRM 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,985,506
Number of Sequences: 237096
Number of extensions: 1734005
Number of successful extensions: 7354
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7301
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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