Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0924
(868 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 61 1e-09
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 2e-07
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 52 8e-07
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 7e-06
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 46 4e-05
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 46 5e-05
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 45 9e-05
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 43 4e-04
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 38 0.008
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 38 0.011
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 38 0.011
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 37 0.019
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 37 0.019
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.024
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 35 0.099
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 33 0.40
SB_23321| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.92
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_794| Best HMM Match : C2 (HMM E-Value=1e-23) 30 2.8
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 3.7
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 29 4.9
SB_52307| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +1
Query: 352 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLER-I*L 528
R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI R I
Sbjct: 84 REDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIG 143
Query: 529 AYQTGSGKTLAYILPAIV 582
+TGSGKT A+ +P +V
Sbjct: 144 VAETGSGKTAAFAIPLLV 161
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 54.0 bits (124), Expect = 2e-07
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +1
Query: 364 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA-YQT 540
EV VSG I FEEAN + V+ YK+PTP+Q PI R +A QT
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 541 GSGKTLAYILPAI 579
GSGKT A++LP +
Sbjct: 758 GSGKTAAFLLPVM 770
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 51.6 bits (118), Expect = 8e-07
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +1
Query: 352 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 492
R + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 66 RRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 588 LNNQPPIRRGDGPIALVL 641
+N+QP ++ GDGPI LVL
Sbjct: 121 INHQPLLQPGDGPIVLVL 138
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/70 (40%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +1
Query: 373 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA-YQTGSG 549
VSG I F E F + + + GY+ PTP+Q PI R +A QTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 550 KTLAYILPAI 579
KT AY+LP +
Sbjct: 529 KTAAYMLPVL 538
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 289 KTFMIHILQFSKDHHMKSKSTRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYK 468
K F + +K + R + VSG P F F + + ++ + Y
Sbjct: 479 KNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRKLEYT 538
Query: 469 EPTPIQAQGWPIASLERI*LAY-QTGSGKTLAYILPAIV 582
+PT IQ Q PIA R + +TGSGKT A++ PA+V
Sbjct: 539 QPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Score = 44.0 bits (99), Expect = 2e-04
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Frame = +3
Query: 252 PDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYQK*SRGNCKWR*GS*SYSIL*RSKF-- 425
P+ + +PFNKNFY+ HP + K+S E+++ +K + K + + + F
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRK--KMGIKVSGAMPARPCISFAHFGF 524
Query: 426 -S*LCATRCKDNGLQRTDAHSSSRLADS*SGKNLVGVPNGFRQNVGLHLASHCATLNNQP 602
+ A+ K Q T + L + SG++++G+ L + +QP
Sbjct: 525 DEQMMASIRKLEYTQPTQIQCQA-LPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQP 583
Query: 603 PIRRGDGPIALV 638
++ GDGPI L+
Sbjct: 584 ELQVGDGPIVLI 595
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 7e-06
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +1
Query: 313 QFSKDHHMKSKSTRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTP 480
+ ++ H K R+ + V G +V +P++ F E FPDY+ V+ GY PTP
Sbjct: 129 KLAEKHQEKINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTP 188
Query: 481 IQAQGWPI 504
IQ Q P+
Sbjct: 189 IQMQATPL 196
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 400 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA-YQTGSGKTLAYILPA 576
I FE+ + + + V GYK+PTP+Q PI +R +A QTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 577 I 579
+
Sbjct: 934 L 934
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/65 (44%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 364 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA-YQT 540
EV VSG I FEEAN + V+ YK+PTP+Q PI R +A QT
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 541 GSGKT 555
GSGKT
Sbjct: 181 GSGKT 185
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 45.6 bits (103), Expect = 5e-05
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 343 KSTRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLER- 519
K R+ E+ V G V +P+ F +F + + + + GY PTPIQ Q P+ R
Sbjct: 176 KQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRD 235
Query: 520 I*LAYQTGSGKTL 558
+ + TGSGK L
Sbjct: 236 VMVCASTGSGKLL 248
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 44.8 bits (101), Expect = 9e-05
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Frame = +1
Query: 367 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP--IASLERI*LAYQT 540
+ + G + PI+ F + N P + + ++ PTPIQ Q ++ + I LA +T
Sbjct: 60 IHIEGEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLA-ET 118
Query: 541 GSGKTLAYILP 573
GSGKTLAY LP
Sbjct: 119 GSGKTLAYSLP 129
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 42.7 bits (96), Expect = 4e-04
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 400 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*L-AYQTGSGKTLAYILPA 576
++ F + G+ G+ PT IQ QG P+A R L A +TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 577 I 579
I
Sbjct: 109 I 109
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 38.3 bits (85), Expect = 0.008
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 442 QGVKTMGYKEPTPIQAQGWPIASLER-I*LAYQTGSGKTLAYILPAI 579
+ V +G+ PTPIQA P+A + + + TG+GKT A++LP +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPIL 69
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA-YQTGSGKTLAYILPAI 579
FE+ + G+ G+ +P+PIQ + P+A R LA + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 37.9 bits (84), Expect = 0.011
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA-YQTGSGKTLAYILPAI 579
FE+ + G+ G+ +P+PIQ + P+A R LA + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLL 106
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 37.1 bits (82), Expect = 0.019
Identities = 18/52 (34%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +1
Query: 427 PDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILPAI 579
P V++ +K MG +P PIQ + P + S + + + +TG+GK+L ++LP++
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 37.1 bits (82), Expect = 0.019
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = +1
Query: 334 MKSKSTRNNHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 504
++ K HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+
Sbjct: 77 LRDKLVVTKHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPM 136
Query: 505 ASLE---RI*LAYQTGSGKTLAYIL 570
+ + Q+G+GKT A++L
Sbjct: 137 LLADPPVNMIAQSQSGTGKTAAFVL 161
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 36.7 bits (81), Expect = 0.024
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = +1
Query: 427 PDYVQQGVKTMGYKEPTPIQAQGWPIASLER--I*LAYQTGSGKTLAYILPAI 579
PD + + + G+ +PTPIQ+ P A L I A +TGSGKTLA+ +P I
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPII 190
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 36.3 bits (80), Expect = 0.032
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 442 QGVKTMGYKEPTPIQAQGW-PIASLERI*LAYQTGSGKTLAYILPAI 579
QG+K MG+ T IQ + P+ + A +TGSGKTLA+++P +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVV 631
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 34.7 bits (76), Expect = 0.099
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 430 DYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILPAI 579
D V + + + +PT IQ P I + A QTGSGKTLAY+ P +
Sbjct: 387 DDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLV 437
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 32.7 bits (71), Expect = 0.40
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 364 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP--IASLERI*LAYQ 537
EV + G P + F +Y + +G PT +Q WP + + +A +
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 538 TGSGKTLAYILPAI 579
GSGK LAY+LP I
Sbjct: 234 -GSGKRLAYLLPII 246
>SB_23321| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 31.5 bits (68), Expect = 0.92
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 432 LCATRCKDNGLQRTDAHSSSRLADS*SGKNLVGVPNGFRQNVG-LHLASHCATLNNQPPI 608
+ TR D+ LQ T S SRL +G+ G + F +N+G + + H +N PP+
Sbjct: 108 MALTRQTDSLLQETFIRSVSRLDGDITGRPSEGSSSFFHRNIGEFYHSDHYRFWDNNPPV 167
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 255 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYQ 353
D +V QPF K+FY P + K +P E +E++
Sbjct: 55 DHKTVVYQPFRKDFYVEVPELAKMTPEETDEFR 87
Score = 31.1 bits (67), Expect = 1.2
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 289 KTFMIHILQFSKDHHMKSKSTRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 465
K F + + + +K ++ R + E + V G P++ + + + +K Y
Sbjct: 66 KDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLKKNSY 125
Query: 466 KEPTPIQAQGWPI 504
++PTPIQAQ P+
Sbjct: 126 EKPTPIQAQAIPV 138
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.6
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 385 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 498
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_794| Best HMM Match : C2 (HMM E-Value=1e-23)
Length = 583
Score = 29.9 bits (64), Expect = 2.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = -1
Query: 676 EFVVLNSLGRPPKTKAIGPSPLRIGGW 596
E+++LNS+ PP +KA S L++ GW
Sbjct: 528 EYIILNSVDNPP-SKAFVTSDLQLNGW 553
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -1
Query: 187 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 74
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 457 MGYKEPTPIQAQGWPIASLERI*LAY-QTGSGKTLAYILPAI 579
MG K+PT IQ P R + +TGSGKT A+ LP +
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPIL 66
>SB_52307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 668
Score = 29.1 bits (62), Expect = 4.9
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Frame = +3
Query: 465 QRTDAHSSSRLADS*SGKNLVGVPNGFRQNVGLHLASHCATLNNQPPIRRGDGPIALVLG 644
+ TD SSS D + V P+G + + ++N P + G L G
Sbjct: 63 ETTDLSSSSSDDDDDDDDDAVAAPDGVKIEENFKGRAAVLNVSNDPEVSAGSPTETLFYG 122
Query: 645 GLPREF--STTNSASXL 689
G+P + ST NS+ +
Sbjct: 123 GIPIKIIVSTFNSSEVI 139
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,156,077
Number of Sequences: 59808
Number of extensions: 520221
Number of successful extensions: 1311
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1232
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2479240863
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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