Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0924
         (868 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    50   1e-07
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           27   0.74 
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   3.0  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 49.6 bits (113), Expect = 1e-07
 Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
 Frame = +1

Query: 364 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA-YQT 540
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI    R  +A  QT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 541 GSGKTLAYILPAI 579
           GSGKT A++LP I
Sbjct: 221 GSGKTAAFMLPMI 233


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 0.74
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 116 TVVPNLEEATNSAIILLDLATVAIDLEDLEDLVGKKNSLE 235
           T++ +L+E   S +  LDL    ID  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -2

Query: 165 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFFLTQ 25
           RR+ A+  A ++F          ++   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 847,664
Number of Sequences: 2352
Number of extensions: 17158
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)