Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0924
(868 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 57 1e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 57 1e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 57 1e-08
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 54 1e-07
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 54 2e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 51 9e-07
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 46 3e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 46 4e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 46 4e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 46 4e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 45 6e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 45 6e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 2e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 43 2e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 42 8e-04
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 42 8e-04
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 42 8e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 39 0.004
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 39 0.004
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 37 0.016
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 37 0.016
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 36 0.037
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 34 0.11
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 34 0.11
Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.35
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 32 0.61
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 31 1.1
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 31 1.1
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 31 1.4
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.5
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 5.7
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 28 9.9
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 72.9 bits (171), Expect = 3e-13
Identities = 36/78 (46%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +1
Query: 352 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA 531
R + +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI R +
Sbjct: 284 REDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIG 343
Query: 532 Y-QTGSGKTLAYILPAIV 582
+TGSGKT A++LP +V
Sbjct: 344 VAETGSGKTAAFLLPLLV 361
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 358 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLER-I*LAY 534
N V VSG V I++F EA F V + V GY +PTP+Q P R +
Sbjct: 124 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 183
Query: 535 QTGSGKTLAYILPAI 579
QTGSGKT A++LP I
Sbjct: 184 QTGSGKTAAFLLPII 198
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 358 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLER-I*LAY 534
N V VSG V I++F EA F V + V GY +PTP+Q P R +
Sbjct: 108 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 167
Query: 535 QTGSGKTLAYILPAI 579
QTGSGKT A++LP I
Sbjct: 168 QTGSGKTAAFLLPII 182
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/75 (42%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 358 NHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLER-I*LAY 534
N V VSG V I++F EA F V + V GY +PTP+Q P R +
Sbjct: 105 NIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCA 164
Query: 535 QTGSGKTLAYILPAI 579
QTGSGKT A++LP I
Sbjct: 165 QTGSGKTAAFLLPII 179
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 328 HHMKSKSTRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIA 507
H+M +N + V G++ P+ F +F + + ++ Y++PTPIQA P A
Sbjct: 240 HYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSA 299
Query: 508 SLERI*LAY-QTGSGKTLAYILPAIV 582
R L +TGSGKT AY+ PAIV
Sbjct: 300 LSGRDVLGIAKTGSGKTAAYLWPAIV 325
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/132 (19%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Frame = +3
Query: 255 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYQK*SR---GNCKWR*GS*SYSIL*RSKF 425
D + Q FNKNFY+ H + + +V Q G K S++ F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFA---HFSF 272
Query: 426 S*LCATRCKDNGLQRTDAHSSSRLADS*SGKNLVGVPNGFRQNVGLHLASHCATLNNQPP 605
L + + ++ + + + SG++++G+ +L + +QP
Sbjct: 273 DKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPD 332
Query: 606 IRRGDGPIALVL 641
++ G+GP+A+++
Sbjct: 333 LKAGEGPVAVIV 344
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 54.4 bits (125), Expect = 1e-07
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +1
Query: 367 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLER-I*LAYQTG 543
V +G +V PI F + + +++++ +KT GY PTP+Q P R + QTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 544 SGKTLAYILPAI 579
SGKT A+++P +
Sbjct: 214 SGKTAAFLVPLV 225
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 53.6 bits (123), Expect = 2e-07
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Frame = +1
Query: 361 HEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LAY-Q 537
++VT+ G V P+ F EA P + + + +++PT IQ+ WPIA R ++ +
Sbjct: 116 NQVTLEGRGVPRPVFEFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAK 174
Query: 538 TGSGKTLAYILPAIVPH*T--TNRLFGEVMVRLLWSWAAYPESLAPQIQQVXCRF 696
TGSGKTLA++LPA+V H T +R GE L+ LA Q+Q+V F
Sbjct: 175 TGSGKTLAFMLPALV-HITKQAHRQRGEGPAVLV---LLPTRELAQQVQEVSIDF 225
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 255 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEY 350
DW + +L P K+FY + V +R YE++++
Sbjct: 81 DWSAENLTPIEKDFYHENAAVSRREQYEIDQW 112
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 51.2 bits (117), Expect = 9e-07
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Frame = +1
Query: 376 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIASLERI*LAY-QTGSG 549
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ + + QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 550 KTLAYILPAIV 582
KTLA++LPA++
Sbjct: 134 KTLAFLLPALL 144
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 46.4 bits (105), Expect = 3e-05
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Frame = +1
Query: 289 KTFMIHILQFSKDHHMKSKSTRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 465
K F I + + + K+ R + +TV G++ PI+ + + + +K Y
Sbjct: 265 KNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKFEY 324
Query: 466 KEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILP 573
+PT IQAQ P I S + +TGSGKTLA++LP
Sbjct: 325 SKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLP 361
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 510 SGKNLVGVPNGFRQNVGLHLASHCATLNNQPPIRRGDGPIALVL 641
SG++++G+ L + +QP + GDGPIA++L
Sbjct: 340 SGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVIL 383
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASL-ERI*LAYQTGSGKTLAYILP 573
P + F EAN + +Q+ V GY + TPIQ P+ I QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASL-ERI*LAYQTGSGKTLAYILP 573
P + F EAN + +Q+ V GY + TPIQ P+ I QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 46.0 bits (104), Expect = 4e-05
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASL-ERI*LAYQTGSGKTLAYILP 573
P + F EAN + +Q+ V GY + TPIQ P+ I QTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILP 573
P + F +++ P +++ V+ GY TPIQ P +A + I QTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +1
Query: 397 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILP 573
P + F +++ P +++ V+ GY TPIQ P +A + I QTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 43.6 bits (98), Expect = 2e-04
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 367 VTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTPIQAQGWPIASLERI*LAY-QT 540
++ G + PI F E FP + + + K G PT IQ QG P+A R + T
Sbjct: 177 ISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIAST 236
Query: 541 GSGKTLAYILPAIV 582
GSGKT+ ++LP ++
Sbjct: 237 GSGKTMTFVLPLVM 250
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Frame = +1
Query: 337 KSKSTRNNHE---VTVSGVEVHNPIQY-FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 504
KSK ++ N + + G + + FE+ N + + GY +PTPIQ P+
Sbjct: 122 KSKKSQENEDFFSALIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPV 181
Query: 505 ASLER-I*LAYQTGSGKTLAYILPAI 579
A + I TG+GKT A++LP +
Sbjct: 182 ALTGKDICACAATGTGKTAAFVLPIL 207
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = +1
Query: 427 PDYVQQGVKTMGYKEPTPIQAQGWPIASLER--I*LAYQTGSGKTLAYILPAI 579
P+ V + ++ MG+ EPT IQ+ P A +R + A +TGSGKTLA+ +P +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 215
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILP 573
F EAN + +++ V GY + TPIQ P I I QTGSGKT A++LP
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILP 573
F EAN + +++ V GY + TPIQ P I I QTGSGKT A++LP
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILP 573
F EAN + +++ V GY + TPIQ P I I QTGSGKT A++LP
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +1
Query: 352 RNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LA 531
R + + G + N I F +++ + + ++P+PIQ Q P + R LA
Sbjct: 109 RRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLA 168
Query: 532 YQ-TGSGKTLAYILPAI 579
TGSGKTLA+ LP I
Sbjct: 169 SAPTGSGKTLAFALPVI 185
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 427 PDYVQQGVKTMGYKEPTPIQ-AQGWPIASLERI*LAYQTGSGKTLAYILPAIV 582
P + +K M PTPIQ A +PI + TGSGKTLA+++P ++
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVI 796
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 427 PDYVQQGVKTMGYKEPTPIQ-AQGWPIASLERI*LAYQTGSGKTLAYILPAIV 582
P + +K M PTPIQ A +PI + TGSGKTLA+++P ++
Sbjct: 744 PQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVI 796
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 334 MKSKSTRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IAS 510
M S + ++ ++ H +++ V + ++ G+ +PTPIQ + P I
Sbjct: 1 MASDDEEDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMD 60
Query: 511 LERI*LAYQTGSGKTLAYILPAI 579
+ + +TGSGKT A+++P +
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPML 83
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +1
Query: 334 MKSKSTRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IAS 510
M S + ++ ++ H +++ V + ++ G+ +PTPIQ + P I
Sbjct: 1 MASDDEEDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMD 60
Query: 511 LERI*LAYQTGSGKTLAYILPAI 579
+ + +TGSGKT A+++P +
Sbjct: 61 GKDVVAMSRTGSGKTAAFVIPML 83
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 35.9 bits (79), Expect = 0.037
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = +1
Query: 442 QGVKTMGYKEPTPIQAQGW-PIASLERI*LAYQTGSGKTLAYILPAI 579
+ V+ +G+ T IQA+ P+ + + + +TGSGKTLA++LPAI
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI 127
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILPAI 579
F + ++ Q ++TM K TP+QA P I I +TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWP-IASLERI*LAYQTGSGKTLAYILPAI 579
F + ++ Q ++TM K TP+QA P I I +TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPIL 148
>Z11505-7|CAA77581.1| 918|Caenorhabditis elegans Hypothetical
protein F59B2.12 protein.
Length = 918
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 283 STKTFMIHILQFSKDHHMKSKSTRNNHEVTVSGVEVHN 396
++K M+H K HH S S+ N H +TV G + N
Sbjct: 62 ASKAAMVHSSSSHKGHHQSSGSSSNTHSLTVVGADGKN 99
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 400 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLE---RI*LAYQTGSGKTLAYIL 570
I F E V + + TM ++ PT IQ P+ +E + Q+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 400 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLE---RI*LAYQTGSGKTLAYIL 570
I F E V + + TM ++ PT IQ P+ +E + Q+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 400 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLE---RI*LAYQTGSGKTLAYIL 570
I F E V + + TM ++ PT IQ P+ +E + Q+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 32.7 bits (71), Expect = 0.35
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 463 YKEPTPIQAQGWPIASLER--I*LAYQTGSGKTLAYILPAI 579
+ EPT IQ+ P A +R + A +TGSGKTLA+ +P +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 48
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 400 IQYFEEANFPDYVQQGVKTMGYKEPTPIQA-QGWPIASLERI*LAYQTGSGKTLAYILP 573
++ F E P+ ++ V YK T +Q G + +L + + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLP 66
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LAY-QTGSGKTLAYILPAI 579
FE + +K + P+P+QA+ P+ L R L ++G+GKTL + + A+
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAV 81
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIASLERI*LAY-QTGSGKTLAYILPAI 579
FE + +K + P+P+QA+ P+ L R L ++G+GKTL + + A+
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAV 81
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 442 QGVKTMGYKEPTPIQAQ--GWPIASLERI*LAYQTGSGKTLAYILPAI 579
+G+K Y +PT IQ + + + + A +TGSGKTLA ++P +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAA-KTGSGKTLALVIPVL 135
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 409 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWP--IASLERI*LAYQTGSGKTLAYILP 573
FEE + + ++ + PT +Q++ P + + + +A +TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADAL-IAAETGSGKTGAFSLP 59
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 24 PASERIHSLNKHLQLNPKNNHVW 92
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 570 ASHCATLNNQPPIRRGDGPIALVLGGLP 653
+ C NNQPP R DG + L G P
Sbjct: 85 SGECRCANNQPPFRTRDGLVCLNYGFCP 112
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 165 RRIIAEFVASSKFGTTVSTAIIPV 94
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 165 RRIIAEFVASSKFGTTVSTAIIPV 94
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 27.9 bits (59), Expect = 9.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 526 LAYQTGSGKTLAYILPAI 579
+A TGSGKT+ Y+LP +
Sbjct: 161 IAAPTGSGKTICYVLPVL 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,536,116
Number of Sequences: 27780
Number of extensions: 401631
Number of successful extensions: 1180
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1159
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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