Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0923
(805 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondri... 144 2e-33
UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondri... 122 8e-27
UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1; Parame... 96 8e-19
UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100; ce... 71 3e-11
UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47; Bacte... 71 5e-11
UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1; ... 69 2e-10
UniRef50_Q37798 Cluster: CF1ATPase alpha-subunit; n=1; Allium am... 64 5e-09
UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2; Bacter... 61 3e-08
UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafete... 59 1e-07
UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellu... 56 8e-07
UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2; Firmic... 51 4e-05
UniRef50_UPI0000382621 Cluster: COG0056: F0F1-type ATP synthase,... 47 5e-04
UniRef50_Q9RQ78 Cluster: Alpha subunit of membrane-bound ATP syn... 43 0.008
UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2; ... 43 0.008
UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13; Lis... 38 0.22
UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3; ... 36 1.6
UniRef50_A7PG24 Cluster: Chromosome chr6 scaffold_15, whole geno... 34 4.8
>UniRef50_P35381 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=847; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Drosophila
melanogaster (Fruit fly)
Length = 552
Score = 144 bits (350), Expect = 2e-33
Identities = 69/87 (79%), Positives = 74/87 (85%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLDAA QQLLNRG+RLTELLKQGQYVPMAIE+QVA+IYCGVRGHLDK+DP+KIT
Sbjct: 445 FAQFGSDLDAATQQLLNRGVRLTELLKQGQYVPMAIEDQVAVIYCGVRGHLDKMDPAKIT 504
Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQI 502
KEF QHIKTS Q LL TIAKDG I
Sbjct: 505 KFEKEFLQHIKTSEQALLDTIAKDGAI 531
Score = 37.1 bits (82), Expect = 0.52
Identities = 23/40 (57%), Positives = 26/40 (65%)
Frame = +3
Query: 135 LXXTRVGICCLRPRAMKAXGPVPMKLELAQYREVAXFAQF 254
L +RVG + +AMK MKLELAQYREVA FAQF
Sbjct: 411 LSVSRVGSAA-QTKAMKQVAG-SMKLELAQYREVAAFAQF 448
>UniRef50_P25705 Cluster: ATP synthase subunit alpha, mitochondrial
precursor; n=489; cellular organisms|Rep: ATP synthase
subunit alpha, mitochondrial precursor - Homo sapiens
(Human)
Length = 553
Score = 122 bits (295), Expect = 8e-27
Identities = 59/87 (67%), Positives = 67/87 (77%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLDAA QQLL+RG+RLTELLKQGQY PMAIEEQVA+IY GVRG+LDKL+PSKIT
Sbjct: 446 FAQFGSDLDAATQQLLSRGVRLTELLKQGQYSPMAIEEQVAVIYAGVRGYLDKLEPSKIT 505
Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQI 502
F H+ + HQ LL TI DG+I
Sbjct: 506 KFENAFLSHVVSQHQALLGTIRADGKI 532
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = +3
Query: 135 LXXTRVGICCLRPRAMKAXGPVPMKLELAQYREVAXFAQF 254
L +RVG + RAMK MKLELAQYREVA FAQF
Sbjct: 412 LSVSRVGSAA-QTRAMKQVAGT-MKLELAQYREVAAFAQF 449
>UniRef50_A0D564 Cluster: ATP synthase subunit alpha; n=1;
Paramecium tetraurelia|Rep: ATP synthase subunit alpha -
Paramecium tetraurelia
Length = 612
Score = 96.3 bits (229), Expect = 8e-19
Identities = 44/84 (52%), Positives = 60/84 (71%)
Frame = +2
Query: 251 VRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAXX 430
++ +LDAA QQLLNRG +LTELLKQ QYVPM EEQV +IY GVRG LDK+ S+I
Sbjct: 504 IQRNLDAATQQLLNRGAQLTELLKQKQYVPMCAEEQVCVIYAGVRGFLDKVQTSEIAKFE 563
Query: 431 KEFTQHIKTSHQGLLSTIAKDGQI 502
++F H++T++ +L I G++
Sbjct: 564 EKFLTHLRTNYPAMLERIRSTGEL 587
>UniRef50_Q5FRC7 Cluster: ATP synthase subunit alpha 1; n=100;
cellular organisms|Rep: ATP synthase subunit alpha 1 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 511
Score = 71.3 bits (167), Expect = 3e-11
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLDAA ++ L+RG RL ELLKQ + P+ +EEQV ++Y G RG++D + K+
Sbjct: 404 FSQFASDLDAATRKQLDRGARLVELLKQPETSPLPVEEQVVVLYAGTRGYVDPIAVDKVV 463
Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQI 502
A ++ + +L+ I D QI
Sbjct: 464 AYEAALLSELRGAGSDILTAIRNDRQI 490
>UniRef50_P45825 Cluster: ATP synthase subunit alpha; n=47;
Bacteria|Rep: ATP synthase subunit alpha - Mycobacterium
leprae
Length = 558
Score = 70.5 bits (165), Expect = 5e-11
Identities = 34/87 (39%), Positives = 48/87 (55%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLDA + L RG RL ELLKQ QY PM +EEQV ++ G GHLD + +
Sbjct: 406 FAAFASDLDATSKAQLERGARLVELLKQPQYQPMPVEEQVISLFLGTGGHLDSVPVGDVR 465
Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQI 502
E HI+ + + +L+ I + ++
Sbjct: 466 RFETELLDHIRVAQEEILTEIRESQKL 492
>UniRef50_UPI000023E632 Cluster: hypothetical protein FG01079.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01079.1 - Gibberella zeae PH-1
Length = 175
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/66 (50%), Positives = 43/66 (65%)
Frame = +2
Query: 305 LTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAXXKEFTQHIKTSHQGLLSTI 484
LTELLKQ QY PMA+ E V +I+ GV G LD + +KI +F H+KT+ LL+TI
Sbjct: 89 LTELLKQKQYSPMAVTEMVPLIFAGVNGFLDTIPVNKILQWESDFLAHLKTNETELLATI 148
Query: 485 AKDGQI 502
K+G I
Sbjct: 149 DKEGAI 154
>UniRef50_Q37798 Cluster: CF1ATPase alpha-subunit; n=1; Allium
ampeloprasum|Rep: CF1ATPase alpha-subunit - Allium
porrum (Leek)
Length = 136
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/71 (45%), Positives = 41/71 (57%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLD A Q L RG RL ELLKQ Q P+ +EEQ+A IY G G+LD L+ +I
Sbjct: 25 FAQFASDLDKATQNQLARGQRLRELLKQSQSDPLTVEEQIATIYIGANGYLDSLEIGQIK 84
Query: 422 AXXKEFTQHIK 454
+ ++K
Sbjct: 85 KFLIKLRTYLK 95
>UniRef50_Q6A8C5 Cluster: ATP synthase subunit alpha; n=2;
Bacteria|Rep: ATP synthase subunit alpha -
Propionibacterium acnes
Length = 545
Score = 61.3 bits (142), Expect = 3e-08
Identities = 31/86 (36%), Positives = 49/86 (56%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLD ++ L+RG RL ELLKQGQ+ P +EEQV ++ G G D + +
Sbjct: 408 FAMFASDLDDTSRRQLDRGARLMELLKQGQFSPYPVEEQVISVWGGTTGKFDDVPVGDVL 467
Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQ 499
+ ++++ SH +L+TI + G+
Sbjct: 468 RFEGDVLEYLR-SHSNVLTTIRETGK 492
>UniRef50_Q9TAH9 Cluster: ATP synthase subunit alpha; n=1; Cafeteria
roenbergensis|Rep: ATP synthase subunit alpha -
Cafeteria roenbergensis
Length = 601
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F + LDA ++ LNRG RL ELLKQGQYVP+ + Q+ ++ G+ G LD +
Sbjct: 491 FAKFGASLDAETKRQLNRGARLVELLKQGQYVPLEVSVQIVFVFLGISGLLDGRKLENLG 550
Query: 422 AXXKEFTQHIKTSHQGLLST 481
+++ +++G++++
Sbjct: 551 QLKSILRSYLRQNYKGMVTS 570
>UniRef50_Q0SGP7 Cluster: ATP synthase subunit alpha; n=17; cellular
organisms|Rep: ATP synthase subunit alpha - Rhodococcus
sp. (strain RHA1)
Length = 547
Score = 56.4 bits (130), Expect = 8e-07
Identities = 29/81 (35%), Positives = 40/81 (49%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLDAA + L RG RL ELLKQ QY P+ +E+Q+ IY G D + +
Sbjct: 406 FSAFASDLDAASKAQLERGARLVELLKQDQYSPIPVEDQIVSIYLAGEGVFDSVPVGDVR 465
Query: 422 AXXKEFTQHIKTSHQGLLSTI 484
E + + G+ +I
Sbjct: 466 RFEAELLDELHRTASGVYESI 486
>UniRef50_O50140 Cluster: ATP synthase subunit alpha; n=2;
Firmicutes|Rep: ATP synthase subunit alpha -
Ruminococcus albus
Length = 523
Score = 50.8 bits (116), Expect = 4e-05
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLD + L +G R+ E+LKQ + P+ +E+QV +IY V +L K+ I
Sbjct: 414 FSQFGSDLDQDTKDRLAQGERIVEVLKQSKNSPVDVEKQVLLIYAVVNNYLKKIPVEDIR 473
Query: 422 AXXKEFTQHIKTSHQGLLSTI 484
K+ + SH +L++I
Sbjct: 474 EYEKDLFLFLDESHPDILASI 494
>UniRef50_UPI0000382621 Cluster: COG0056: F0F1-type ATP synthase,
alpha subunit; n=1; Magnetospirillum magnetotacticum
MS-1|Rep: COG0056: F0F1-type ATP synthase, alpha subunit
- Magnetospirillum magnetotacticum MS-1
Length = 80
Score = 47.2 bits (107), Expect = 5e-04
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +2
Query: 305 LTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKITAXXKEFTQHIKTSHQGLLSTI 484
+TELLKQ QY PM++ +Q +++ RG+L ++ SKI + ++ H L+ I
Sbjct: 1 MTELLKQKQYAPMSVAQQSLVLFAAERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEI 60
Query: 485 AKDG 496
+ G
Sbjct: 61 NQSG 64
>UniRef50_Q9RQ78 Cluster: Alpha subunit of membrane-bound ATP
synthase; n=23; Gammaproteobacteria|Rep: Alpha subunit
of membrane-bound ATP synthase - Buchnera aphidicola
Length = 224
Score = 43.2 bits (97), Expect = 0.008
Identities = 28/84 (33%), Positives = 40/84 (47%)
Frame = +2
Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
F SDLD + L G +L E+LKQ QY M++ EQ I+Y +G ++ + KI
Sbjct: 117 FSQFSSDLDELTRNQLIYGKKLIEILKQQQYQSMSVAEQALILYSADQGFINDVKIEKI- 175
Query: 422 AXXKEFTQHIKTSHQGLLSTIAKD 493
K F Q + + S KD
Sbjct: 176 ---KSFEQSLISFANEKFSDFMKD 196
>UniRef50_A7DHD0 Cluster: Putative uncharacterized protein; n=2;
Methylobacterium extorquens PA1|Rep: Putative
uncharacterized protein - Methylobacterium extorquens
PA1
Length = 680
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = -1
Query: 466 LVASFDVLSEFLXXGSDFXGVQLVEVTADTAVNDGDLFLNSHGHILSLLEELSKTHSSVE 287
LV E L G+D +LVEV D V+ DL + L LL+EL + ++VE
Sbjct: 95 LVLGAQGAEELLLEGADLAHRKLVEVAVDAGVDHRDLLFHLQRRELRLLQELGEARAAVE 154
Query: 286 QLLXSGIQVR 257
Q L +++R
Sbjct: 155 QTLGRDVEIR 164
>UniRef50_Q92FH0 Cluster: ATP synthase subunit alpha 1; n=13;
Listeria|Rep: ATP synthase subunit alpha 1 - Listeria
innocua
Length = 498
Score = 38.3 bits (85), Expect = 0.22
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +2
Query: 263 LDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKI 418
LD +++ G LTEL KQ P+++ E + I+Y G L K+ P+ +
Sbjct: 397 LDDGSMKMVTDGRMLTELFKQNILSPLSVTELITILYAFQNGFLTKMAPANV 448
>UniRef50_A0VM48 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Dinoroseobacter shibae DFL 12
Length = 950
Score = 35.5 bits (78), Expect = 1.6
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = -1
Query: 502 DLTVF-GDRGEKTLVASFDVLSEFLXXGSDFXGVQLVEVTADTAVNDGDLFLNSHGHILS 326
DL +F GD ++ LV + V + L + LVEV + D +L
Sbjct: 327 DLGIFLGDVVQQALVLAAQVRQQALLVTAHVPHGDLVEVALGAGEDHADDLGIGQRRVLR 386
Query: 325 LLEELSKTHSSVEQLLXSGIQV 260
LL +L + ++V+QLL G++V
Sbjct: 387 LLHQLGQARTTVQQLLCGGVEV 408
>UniRef50_A7PG24 Cluster: Chromosome chr6 scaffold_15, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_15, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 69
Score = 33.9 bits (74), Expect = 4.8
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +2
Query: 272 AXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKI 418
A Q L + +L ELL+Q Q P+ ++EQ+ I+ +LD L+ +I
Sbjct: 9 ATQNQLTKVEQLHELLQQSQSSPLTMKEQIMTIHTQTNDYLDSLEIEQI 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,349,518
Number of Sequences: 1657284
Number of extensions: 11987241
Number of successful extensions: 26264
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 25499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26260
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69143070360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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