Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0923
         (805 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical ...   124   1e-28
AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical ...   124   1e-28
AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical ...   124   1e-28
Z92825-1|CAB07313.1|  415|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>AL023815-4|CAF31480.1|  511|Caenorhabditis elegans Hypothetical
           protein H28O16.1d protein.
          Length = 511

 Score =  124 bits (298), Expect = 1e-28
 Identities = 58/87 (66%), Positives = 69/87 (79%)
 Frame = +2

Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
           F    SDLDA+ QQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT
Sbjct: 404 FAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAIT 463

Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQI 502
              KEF  H+++S Q LL TI ++GQI
Sbjct: 464 KFEKEFLAHLRSSQQALLKTIREEGQI 490



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 135 LXXTRVGICCLRPRAMKAXGPVPMKLELAQYREVAXFAQF 254
           L  +RVG    + +AMK      MKLELAQYREVA FAQF
Sbjct: 370 LSVSRVGSAA-QTKAMKQVAG-SMKLELAQYREVAAFAQF 407



 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 484 RQRRSDHPQSDAXLKKIVTDFLATF 558
           R+     PQ+DA LK +V +FLATF
Sbjct: 485 REEGQISPQTDAQLKDVVVNFLATF 509


>AL023815-3|CAD92384.1|  503|Caenorhabditis elegans Hypothetical
           protein H28O16.1c protein.
          Length = 503

 Score =  124 bits (298), Expect = 1e-28
 Identities = 58/87 (66%), Positives = 69/87 (79%)
 Frame = +2

Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
           F    SDLDA+ QQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT
Sbjct: 396 FAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAIT 455

Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQI 502
              KEF  H+++S Q LL TI ++GQI
Sbjct: 456 KFEKEFLAHLRSSQQALLKTIREEGQI 482



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 135 LXXTRVGICCLRPRAMKAXGPVPMKLELAQYREVAXFAQF 254
           L  +RVG    + +AMK      MKLELAQYREVA FAQF
Sbjct: 362 LSVSRVGSAA-QTKAMKQVAG-SMKLELAQYREVAAFAQF 399



 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 484 RQRRSDHPQSDAXLKKIVTDFLATF 558
           R+     PQ+DA LK +V +FLATF
Sbjct: 477 REEGQISPQTDAQLKDVVVNFLATF 501


>AL023815-1|CAA19429.1|  538|Caenorhabditis elegans Hypothetical
           protein H28O16.1a protein.
          Length = 538

 Score =  124 bits (298), Expect = 1e-28
 Identities = 58/87 (66%), Positives = 69/87 (79%)
 Frame = +2

Query: 242 FCPVRSDLDAAXQQLLNRGMRLTELLKQGQYVPMAIEEQVAIIYCGVRGHLDKLDPSKIT 421
           F    SDLDA+ QQLLNRG+RLTELLKQGQYVPM IEEQV +IY GV+G+LDK+DPS IT
Sbjct: 431 FAQFGSDLDASTQQLLNRGVRLTELLKQGQYVPMGIEEQVGVIYAGVKGYLDKVDPSAIT 490

Query: 422 AXXKEFTQHIKTSHQGLLSTIAKDGQI 502
              KEF  H+++S Q LL TI ++GQI
Sbjct: 491 KFEKEFLAHLRSSQQALLKTIREEGQI 517



 Score = 37.1 bits (82), Expect = 0.015
 Identities = 23/40 (57%), Positives = 26/40 (65%)
 Frame = +3

Query: 135 LXXTRVGICCLRPRAMKAXGPVPMKLELAQYREVAXFAQF 254
           L  +RVG    + +AMK      MKLELAQYREVA FAQF
Sbjct: 397 LSVSRVGSAA-QTKAMKQVAG-SMKLELAQYREVAAFAQF 434



 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 484 RQRRSDHPQSDAXLKKIVTDFLATF 558
           R+     PQ+DA LK +V +FLATF
Sbjct: 512 REEGQISPQTDAQLKDVVVNFLATF 536


>Z92825-1|CAB07313.1|  415|Caenorhabditis elegans Hypothetical
           protein C13C4.1 protein.
          Length = 415

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -1

Query: 373 VNDGDLFLNSHGHILSLLEELSKTHSSVEQLLXSGI 266
           +NDG +F N H  +  +L +L K  + +E++  +G+
Sbjct: 129 LNDGTVFFNVHDRLNQILGKLIKIETKLEKVHDNGM 164


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,937,499
Number of Sequences: 27780
Number of extensions: 280059
Number of successful extensions: 628
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)