Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0922
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   7.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   7.1  

>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 493 AYRPILVTTPSWSAGACAPSSS 558
           A RP +VTTP W    CA +SS
Sbjct: 44  AARPGVVTTPRW---GCARASS 62


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 854 KWRVFSPVPRRPPYHGEM 801
           KW VF   PR P    E+
Sbjct: 31  KWNVFDDPPREPTVGSEV 48


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -2

Query: 854 KWRVFSPVPRRPPYHGEM 801
           KW VF   PR P    E+
Sbjct: 31  KWNVFDDPPREPTVGSEV 48


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 140 WVCPCDGGSRSINHQGFYYLPFYS 69
           W+C     + S   + FYYLP  S
Sbjct: 49  WICALVNYNVSEISENFYYLPAMS 72


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,107
Number of Sequences: 336
Number of extensions: 4575
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)