Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0922
(858 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 180 8e-45
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 180 8e-45
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 180 8e-45
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 180 8e-45
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 180 8e-45
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 172 1e-42
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 58 5e-08
M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte adh... 31 7.1
M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte adh... 31 7.1
M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte adh... 31 7.1
BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial... 31 7.1
BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial... 31 7.1
BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial... 31 7.1
AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial... 31 7.1
AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial... 31 7.1
AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial... 31 7.1
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 180 bits (437), Expect = 8e-45
Identities = 86/149 (57%), Positives = 101/149 (67%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
L +G++R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI G K + + A
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVA 177
Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDI 687
PDTVIHC+GEPIKRE+E E+LN VGY DI
Sbjct: 178 PDTVIHCEGEPIKREDEEESLNEVGYDDI 206
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 80 ADNKSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNA 259
AD+K DDLS AIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 260 ARK 268
R+
Sbjct: 64 RRE 66
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 180 bits (437), Expect = 8e-45
Identities = 86/149 (57%), Positives = 101/149 (67%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
L +G++R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI G K + + A
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDI 687
PDTVIHC+GEPIKRE+E E+LN VGY DI
Sbjct: 178 PDTVIHCEGEPIKREDEEESLNEVGYDDI 206
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 80 ADNKSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNA 259
AD+K DDLS AIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 260 ARK 268
R+
Sbjct: 64 RRE 66
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 180 bits (437), Expect = 8e-45
Identities = 86/149 (57%), Positives = 101/149 (67%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
L +G++R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI G K + + A
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDI 687
PDTVIHC+GEPIKRE+E E+LN VGY DI
Sbjct: 178 PDTVIHCEGEPIKREDEEESLNEVGYDDI 206
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 80 ADNKSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNA 259
AD+K DDLS AIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 260 ARK 268
R+
Sbjct: 64 RRE 66
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 180 bits (437), Expect = 8e-45
Identities = 86/149 (57%), Positives = 101/149 (67%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
L +G++R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI G K + + A
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDI 687
PDTVIHC+GEPIKRE+E E+LN VGY DI
Sbjct: 178 PDTVIHCEGEPIKREDEEESLNEVGYDDI 206
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 80 ADNKSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNA 259
AD+K DDLS AIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 260 ARK 268
R+
Sbjct: 64 RRE 66
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 180 bits (437), Expect = 8e-45
Identities = 86/149 (57%), Positives = 101/149 (67%)
Frame = +1
Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
L +G++R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
PIDD+VEG+TGNLFEVYLKPYF+EAYRPI G K + + A
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVA 177
Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDI 687
PDTVIHC+GEPIKRE+E E+LN VGY DI
Sbjct: 178 PDTVIHCEGEPIKREDEEESLNEVGYDDI 206
Score = 91.1 bits (216), Expect = 5e-18
Identities = 44/63 (69%), Positives = 56/63 (88%)
Frame = +2
Query: 80 ADNKSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNA 259
AD+K DDLS AIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTVLLKG
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 260 ARK 268
R+
Sbjct: 64 RRE 66
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 172 bits (419), Expect = 1e-42
Identities = 83/142 (58%), Positives = 95/142 (66%)
Frame = +1
Query: 262 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 441
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 442 GLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWAPDTVIHC 621
G+TGNLFEVYLKPYF+EAYRPI G K + + APDTVIHC
Sbjct: 63 GITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHC 122
Query: 622 DGEPIKREEEXEALNAVGYXDI 687
+GEPIKRE+E E+LN VGY DI
Sbjct: 123 EGEPIKREDEEESLNEVGYDDI 144
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 57.6 bits (133), Expect = 5e-08
Identities = 24/30 (80%), Positives = 27/30 (90%)
Frame = +1
Query: 598 APDTVIHCDGEPIKREEEXEALNAVGYXDI 687
APDTVIHC+GEPIKRE+E E+LN VGY DI
Sbjct: 15 APDTVIHCEGEPIKREDEEESLNEVGYDDI 44
Score = 33.5 bits (73), Expect = 1.0
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +3
Query: 555 FKVVETDPSPFCIV 596
FKVVETDPSP+CIV
Sbjct: 1 FKVVETDPSPYCIV 14
>M61893-1|AAA52375.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>M30640-1|AAA52377.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>M24736-1|AAA52376.1| 610|Homo sapiens endothelial leukocyte
adhesion molecule 1 protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC142711-1|AAI42712.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC142677-1|AAI42678.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>BC131551-1|AAI31552.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AL021940-6|CAA17434.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AL021940-2|CAI19358.1| 547|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 547
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
>AF540378-1|AAN01237.1| 610|Homo sapiens selectin E (endothelial
adhesion molecule 1) protein.
Length = 610
Score = 30.7 bits (66), Expect = 7.1
Identities = 21/75 (28%), Positives = 32/75 (42%)
Frame = -3
Query: 463 RIDCQ*DPQLNHQLAVCGLVFHISLKDTERWIPHQKDAHEGCFSQHGSSEFSHQGNYRLR 284
+++C Q Q+ VC +L + ER + + G F S EFS + + L+
Sbjct: 346 QVECTTQGQWTQQIPVCEAFQCTALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLK 405
Query: 283 ARCKRFPCGVALEQD 239
KR CG E D
Sbjct: 406 G-SKRLQCGPTGEWD 419
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,316,131
Number of Sequences: 237096
Number of extensions: 2820902
Number of successful extensions: 5243
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5231
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -