Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0922
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...   151   5e-37
Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...   145   4e-35
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...   145   4e-35
U58752-5|AAO38681.1|  507|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U58752-4|AAB00667.1|  572|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AC024859-23|ABD63209.1|  299|Caenorhabditis elegans Hypothetical...    28   7.4  
AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical ...    28   7.4  

>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score =  151 bits (367), Expect = 5e-37
 Identities = 70/152 (46%), Positives = 100/152 (65%)
 Frame = +1

Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
           + +G++RKE+V I++SD++CP+EK+RM             DVVSI P P++ YG R+H+L
Sbjct: 64  ILKGKKRKESVAIIVSDESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVL 123

Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
           PIDD++EGLTGNLF+V+LKPYF+EAYRP+          A      K  +         +
Sbjct: 124 PIDDTIEGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVS 183

Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDIRAV 696
           PDT+IH +G+PIKREEE E++N +GY D+  V
Sbjct: 184 PDTMIHYEGDPIKREEEEESMNDIGYDDLGGV 215



 Score = 77.0 bits (181), Expect = 2e-14
 Identities = 36/63 (57%), Positives = 49/63 (77%)
 Frame = +2

Query: 89  KSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNAARK 268
           K  D+LS AIL+ K +PNRLIV+++  DDNSV+A+SQAKM++L LFRGD V+LKG   ++
Sbjct: 13  KKNDELSTAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKE 72

Query: 269 PFA 277
             A
Sbjct: 73  SVA 75


>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  145 bits (351), Expect = 4e-35
 Identities = 74/152 (48%), Positives = 98/152 (64%)
 Frame = +1

Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
           + +G++R+ETV IVL+ DNCP++KI+M             DVVSI+    ++YGKRVH+L
Sbjct: 64  ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122

Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
           PIDD++EGLTGNLF+V+L+PYF +AYRP+          A      K  +         A
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVA 182

Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDIRAV 696
           PDTVIH +G+PIKREEE EALN VGY D+  V
Sbjct: 183 PDTVIHYEGDPIKREEEEEALNEVGYDDLGGV 214



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 35/60 (58%), Positives = 49/60 (81%)
 Frame = +2

Query: 89  KSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNAARK 268
           K  D+L+ AIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKG   R+
Sbjct: 13  KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  145 bits (351), Expect = 4e-35
 Identities = 74/152 (48%), Positives = 98/152 (64%)
 Frame = +1

Query: 241 LAQGQRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 420
           + +G++R+ETV IVL+ DNCP++KI+M             DVVSI+    ++YGKRVH+L
Sbjct: 64  ILKGKKRRETVSIVLNADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVL 122

Query: 421 PIDDSVEGLTGNLFEVYLKPYFMEAYRPILVTTPSWSAGACAPSSSKWSKQIHHHFASWA 600
           PIDD++EGLTGNLF+V+L+PYF +AYRP+          A      K  +         A
Sbjct: 123 PIDDTIEGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVA 182

Query: 601 PDTVIHCDGEPIKREEEXEALNAVGYXDIRAV 696
           PDTVIH +G+PIKREEE EALN VGY D+  V
Sbjct: 183 PDTVIHYEGDPIKREEEEEALNEVGYDDLGGV 214



 Score = 76.6 bits (180), Expect = 2e-14
 Identities = 35/60 (58%), Positives = 49/60 (81%)
 Frame = +2

Query: 89  KSPDDLSXAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGNAARK 268
           K  D+L+ AIL+ K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKG   R+
Sbjct: 13  KKNDELATAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRE 72


>U58752-5|AAO38681.1|  507|Caenorhabditis elegans Hypothetical
           protein B0218.1b protein.
          Length = 507

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 755 PFTFQGLLGVKXSTAAFLHGKGAALVPGK 841
           P  F G  G+K S   F H  G A VPGK
Sbjct: 177 PCHFTGTAGIKPSKMRFAHRGGGASVPGK 205


>U58752-4|AAB00667.1|  572|Caenorhabditis elegans Hypothetical
           protein B0218.1a protein.
          Length = 572

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 755 PFTFQGLLGVKXSTAAFLHGKGAALVPGK 841
           P  F G  G+K S   F H  G A VPGK
Sbjct: 242 PCHFTGTAGIKPSKMRFAHRGGGASVPGK 270


>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical
           protein ZK783.1 protein.
          Length = 2585

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
 Frame = -3

Query: 601 EPTMQNGDGSVSTTLNSTA-RMPPRT-----MKVSSRGSDGKPP*STASSI 467
           E  M+ G GS STT+N T     PR+     +++++ G DG+P  +T   I
Sbjct: 723 EDLMEEGSGSWSTTINGTGITGSPRSEGTIRVRITTLGEDGEPETATKPGI 773


>AC024859-23|ABD63209.1|  299|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.25 protein.
          Length = 299

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = +1

Query: 556 SKWSKQIHHHFASWAPDTVIHCDGEPIKREEEXEALNAVGY 678
           S ++K  +    S++   +I CD    K  EE  A+NAV Y
Sbjct: 117 SMYAKATNGSLLSFSEQQLIDCDDHGFKGCEEQPAINAVSY 157


>AC024211-5|AAF36063.2| 1119|Caenorhabditis elegans Hypothetical
           protein Y76B12C.2 protein.
          Length = 1119

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 601 EPTMQNGDGSVSTTLNSTARMPPRTMKVSSRGS 503
           EP ++   G+      STA MPP+T K S++ S
Sbjct: 28  EPPVKRARGAKKNEAPSTAPMPPKTTKKSTKPS 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,322,243
Number of Sequences: 27780
Number of extensions: 427327
Number of successful extensions: 1063
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)