Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0922
         (858 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   4.8  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   4.8  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   4.8  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   4.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   4.8  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   6.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.3  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   8.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   8.3  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +1

Query: 550 SSSKWSKQIHHHFASWAPDT--VIHCD 624
           S  ++   IHH+   W PDT  ++H D
Sbjct: 128 SQYEFLNAIHHYDDIWLPDTYFIMHGD 154


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +1

Query: 550 SSSKWSKQIHHHFASWAPDT--VIHCD 624
           S  ++   IHH+   W PDT  ++H D
Sbjct: 128 SQYEFLNAIHHYDDIWLPDTYFIMHGD 154


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +1

Query: 550 SSSKWSKQIHHHFASWAPDT--VIHCD 624
           S  ++   IHH+   W PDT  ++H D
Sbjct: 179 SQYEFLNAIHHYDDIWLPDTYFIMHGD 205


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +1

Query: 550 SSSKWSKQIHHHFASWAPDT--VIHCD 624
           S  ++   IHH+   W PDT  ++H D
Sbjct: 128 SQYEFLNAIHHYDDIWLPDTYFIMHGD 154


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -1

Query: 834 GTKAAPLPWRNAAVEXXTPNSP 769
           GT   PL WR    +  T N P
Sbjct: 336 GTPPPPLVWRRNGADLETLNEP 357


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 7/45 (15%), Positives = 20/45 (44%)
 Frame = +1

Query: 505 ILVTTPSWSAGACAPSSSKWSKQIHHHFASWAPDTVIHCDGEPIK 639
           ++   P W+ G    ++ + ++++H    +W    V     E ++
Sbjct: 160 VVAYEPVWAIGTGKTATPQQAQEVHEKLRNWFSKNVNQTVAETVR 204


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 93 LLLSAILFKIYC*NLRTIIIFIT 25
          +LLS+  F++    L TI+IF+T
Sbjct: 1  MLLSSAWFEVIAAVLLTILIFVT 23


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = -3

Query: 580 DGSVSTTLNSTARM-PPRTMKVSSRG 506
           +G   TTLN+T    PP     S RG
Sbjct: 298 NGPTQTTLNATTLFCPPNLRLTSERG 323


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 11/26 (42%), Positives = 13/26 (50%), Gaps = 1/26 (3%)
 Frame = -3

Query: 580 DGSVSTTLNSTARM-PPRTMKVSSRG 506
           +G   TTLN+T    PP     S RG
Sbjct: 388 NGPTQTTLNATTLFCPPNLRLTSERG 413


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,768
Number of Sequences: 438
Number of extensions: 5132
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)