Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0921
(865 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25) 155 3e-38
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41) 122 5e-28
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07) 97 2e-20
SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 2e-18
SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_49265| Best HMM Match : efhand (HMM E-Value=0.68) 50 3e-06
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15) 48 7e-06
SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16) 38 0.008
>SB_49199| Best HMM Match : Metallophos (HMM E-Value=2.5e-25)
Length = 173
Score = 155 bits (377), Expect = 3e-38
Identities = 75/125 (60%), Positives = 88/125 (70%)
Frame = +2
Query: 254 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPD 433
SPVTVCGDIHGQFYDL+ELF+ GG VP T+Y+FMGDFVDRG+YS+ETF LL LK ++PD
Sbjct: 44 SPVTVCGDIHGQFYDLEELFRTGGQVPNTSYVFMGDFVDRGYYSLETFTRLLTLKAKWPD 103
Query: 434 RXTLIRGNHESRQITQVYGXYDECLEIXFHHCVEILYRXIXLFITVXHYRWKXILSYTGG 613
R TL+RGNHESRQITQVYG YDEC + + +TV +L GG
Sbjct: 104 RITLLRGNHESRQITQVYGFYDECQSKYGNANAWRYCCKVFDLLTVAAIIDGQVLCVHGG 163
Query: 614 LSPSI 628
LSP I
Sbjct: 164 LSPDI 168
Score = 48.0 bits (109), Expect = 1e-05
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 6/153 (3%)
Frame = +3
Query: 159 KRCEIIMEAEVKALCAKAREILVEESNVQRVDRP*RFVETYMDSFMI*RNFSKLEVMYPK 338
K CE + E ++K LC E+L+EESNVQ V P F + P
Sbjct: 12 KECEYLPENDLKKLCDYVCELLLEESNVQPVSSPVTVCGDIHGQFYDLEELFRTGGQVPN 71
Query: 339 -QIIYLWETL-----WTEDFILXKLSYCYLH*RLGIQIAXHSSEEIMNRDKSHRFMVXTM 500
+++ + + E F R+ + H S +I + + F
Sbjct: 72 TSYVFMGDFVDRGYYSLETFTRLLTLKAKWPDRITLLRGNHESRQI---TQVYGFYDECQ 128
Query: 501 SA*KYXSITVWRYCTXIFXYLSLSAIIDGRXFC 599
S KY + WRYC +F L+++AIIDG+ C
Sbjct: 129 S--KYGNANAWRYCCKVFDLLTVAAIIDGQVLC 159
>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
Length = 293
Score = 122 bits (293), Expect = 5e-28
Identities = 50/84 (59%), Positives = 65/84 (77%)
Frame = +2
Query: 254 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPD 433
+P+ +CGDIHGQ+YDL LF+ GG PE+NYLF+GD+VDRG S+ET LLLA K++YP+
Sbjct: 57 APLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPE 116
Query: 434 RXTLIRGNHESRQITQVYGXYDEC 505
L+RGNHE I ++YG YDEC
Sbjct: 117 NFFLLRGNHECASINRIYGFYDEC 140
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +3
Query: 105 SVLTCLIRAISIVRSKQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDRP 260
+V + + R + + S+ K ++ EAE++ LC K+REI + + + ++ P
Sbjct: 8 NVDSIISRLLEVRGSRPGKNVQLT-EAEIRGLCLKSREIFLSQPILLELEAP 58
>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
Length = 199
Score = 97.1 bits (231), Expect = 2e-20
Identities = 40/54 (74%), Positives = 48/54 (88%)
Frame = +2
Query: 257 PVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALK 418
PVTVCGD+HGQF+DL ELF++GG P+TNYLFMGD+VDRG+YSVET LL+ LK
Sbjct: 52 PVTVCGDVHGQFHDLMELFRIGGKSPDTNYLFMGDYVDRGYYSVETVTLLVTLK 105
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +3
Query: 150 KQLKRCEIIMEAEVKALCAKAREILVEESNVQRVDRP 260
+QL C+ + EA+VK LC KA+EIL +ESNVQ V P
Sbjct: 16 EQLMECKQLTEAQVKTLCEKAKEILSKESNVQEVKCP 52
>SB_31501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1150
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/78 (51%), Positives = 54/78 (69%)
Frame = +2
Query: 254 SPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPD 433
+P+TVCGDIHGQFYDL +LF+VGG T YLF+GD+VDRG++S+E Y +
Sbjct: 81 APITVCGDIHGQFYDLVKLFEVGGSPATTRYLFLGDYVDRGYFSIECL---------YTN 131
Query: 434 RXTLIRGNHESRQITQVY 487
L+RGNHE R +T+ +
Sbjct: 132 TLFLLRGNHECRHLTEYF 149
>SB_52368| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 49.6 bits (113), Expect = 3e-06
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 251 GSPVTVCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDR 373
G+P+ + GDIHGQ+ DL F G P +Y+F+GD+VDR
Sbjct: 58 GAPINIFGDIHGQYEDLLRHFDKLGYPPNESYIFLGDYVDR 98
>SB_49265| Best HMM Match : efhand (HMM E-Value=0.68)
Length = 720
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Frame = +2
Query: 254 SPVTVCGDIHGQFYDL----KELFKVGGDVPETNYLFMGDFVDRGFYSVE 391
SPV V GD+HG F DL K L+++G + +N+LF+GD+VDRG VE
Sbjct: 671 SPVYVLGDLHGNFRDLVCFEKLLWRMGPVLTPSNFLFLGDYVDRGENGVE 720
>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
Length = 417
Score = 48.4 bits (110), Expect = 7e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 332 PETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRXTLIRGNHE 463
PE Y+F GD VDRG S+E ++L A + YP+ + RGNHE
Sbjct: 6 PENPYIFNGDLVDRGPRSIEICIILFAFTILYPNGVYINRGNHE 49
>SB_1044| Best HMM Match : Metallophos (HMM E-Value=5.8e-16)
Length = 250
Score = 38.3 bits (85), Expect = 0.008
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = +2
Query: 266 VCGDIHGQFYDLKELFKVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRXTL 445
V GDIHG L++LF+ +F+GD+VD S T L+ + ++
Sbjct: 7 VFGDIHGGLRALQQLFERAEITINDKLIFLGDYVDGWSESAATIQFLIEIAEKHD--CIF 64
Query: 446 IRGNHES 466
I+GNH++
Sbjct: 65 IKGNHDA 71
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,993,274
Number of Sequences: 59808
Number of extensions: 397361
Number of successful extensions: 612
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2467263854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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