Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0920
         (838 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   1.7  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   4.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   5.2  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   5.2  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = -3

Query: 452 RVLAFFSRSIEEXFAKPGRFTVSIEK*APMAKYWIDAATSSWICFLIML 306
           RVL   +  +   F+ P  F    ++   M + WID  T  W  ++ ++
Sbjct: 162 RVLVMLAWLLSILFSLPTVFLFEEKQVQSMPQCWIDLQTWQWKVYITLV 210


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 492 TGSVTDSSRTGPPQTRRGRAAHQPSSTP 575
           + S   S+ TGPP  R     H+P+  P
Sbjct: 91  SSSPQTSAPTGPPIVRCALRKHKPNRKP 118


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 779 KIEFSEAAFFVQSSS*GRSLAGEXALPLVLF 687
           K+EFS   FF+ + +   ++ G   + L++F
Sbjct: 341 KLEFSACGFFLINGTLLHTIVGAVTVYLIMF 371


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 779 KIEFSEAAFFVQSSS*GRSLAGEXALPLVLF 687
           K+EFS   FF+ + +   ++ G   + L++F
Sbjct: 166 KLEFSACGFFLINGTLLHTIVGAVTVYLIMF 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,247
Number of Sequences: 336
Number of extensions: 3142
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23036718
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)