Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0920
         (838 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    28   0.40 
Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein...    25   3.8  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         24   6.6  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +1

Query: 493 QAP*PTHHVQGPRKHVVGERRISPRARPQAGE*RHQQHPGGHQDLREQ 636
           Q P      Q  ++   GER + P+ R Q  + +HQQ     Q  R+Q
Sbjct: 277 QRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQ 324


>Y17700-1|CAA76820.1|  122|Anopheles gambiae hypothetical protein
           protein.
          Length = 122

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -3

Query: 575 GRARGLMRRSPTTCLRGPCT**VGYGACQLSPHEQVVNEL 456
           G+  G + ++ TT     C       AC +S HEQ   EL
Sbjct: 34  GQHYGXLLKASTTWNEKECNGSTKLAACVVSEHEQAYREL 73


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 297 DLLQHDEETDPGGSGRVNPVLS 362
           D LQ +E   P G+GR+  V S
Sbjct: 98  DQLQQEETDAPAGAGRIRKVRS 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,110
Number of Sequences: 2352
Number of extensions: 13626
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88478514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)