Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0919
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    24   1.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    24   1.3  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   3.0  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   3.0  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   3.0  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   4.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   7.0  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.3  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 403 VRVIKGTFCSELTCVFIKGNYLYFIVVFLNK 311
           +R     FC  + C+ + GN +  IV+F  K
Sbjct: 67  IRTTSMVFCIIIMCLGVIGNVMVPIVIFKTK 97


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 403 VRVIKGTFCSELTCVFIKGNYLYFIVVFLNK 311
           +R     FC  + C+ + GN +  IV+F  K
Sbjct: 67  IRTTSMVFCIIIMCLGVIGNVMVPIVIFKTK 97


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -2

Query: 420 IILVVGYG*SKVLFAVNSLVSSSREIICTLLLYSSTK---LPRANLNLLSGLTDQFIELM 250
           ++++VGY    +L  +N   +    ++ TL++  S     L    L  LS L + F    
Sbjct: 101 LVVLVGYERFDIL--LNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYH 158

Query: 249 AMA-LGICIFLYVSCLNWYSNC 187
             A L I   + ++C  WY NC
Sbjct: 159 TTAYLHIITMINMNCALWYINC 180


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -2

Query: 420 IILVVGYG*SKVLFAVNSLVSSSREIICTLLLYSSTK---LPRANLNLLSGLTDQFIELM 250
           ++++VGY    +L  +N   +    ++ TL++  S     L    L  LS L + F    
Sbjct: 101 LVVLVGYERFDIL--LNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYH 158

Query: 249 AMA-LGICIFLYVSCLNWYSNC 187
             A L I   + ++C  WY NC
Sbjct: 159 TTAYLHIITMINMNCALWYINC 180


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
 Frame = -2

Query: 420 IILVVGYG*SKVLFAVNSLVSSSREIICTLLLYSSTK---LPRANLNLLSGLTDQFIELM 250
           ++++VGY    +L  +N   +    ++ TL++  S     L    L  LS L + F    
Sbjct: 101 LVVLVGYERFDIL--LNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYH 158

Query: 249 AMA-LGICIFLYVSCLNWYSNC 187
             A L I   + ++C  WY NC
Sbjct: 159 TTAYLHIITMINMNCALWYINC 180


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 781 ANIXRPPPALTER*CRTLPXSMERSTESSRAQT 683
           AN+ RP P L+       P +  R T+SS + +
Sbjct: 105 ANLLRPHPYLSPLFHSAAPRTASRETKSSESDS 137


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -1

Query: 112 LLCLI*IYL-FKY*TVHELLYLQLMYFII 29
           LLC+   Y  F   TVH L  L + YF++
Sbjct: 110 LLCVYYFYYAFIIFTVHLLFLLCIYYFVV 138


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 818 SKHPDGPSAPHGSEHXSPP 762
           S+HPD P++   +    PP
Sbjct: 215 SEHPDSPNSKKSATPSPPP 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,699
Number of Sequences: 336
Number of extensions: 4561
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)