Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0919
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U94747-1|AAC18913.1|  342|Homo sapiens HAN11 protein.                 185   2e-46
BC001264-1|AAH01264.1|  342|Homo sapiens WDR68 protein protein.       185   2e-46

>U94747-1|AAC18913.1|  342|Homo sapiens HAN11 protein.
          Length = 342

 Score =  185 bits (450), Expect = 2e-46
 Identities = 88/141 (62%), Positives = 105/141 (74%), Gaps = 2/141 (1%)
 Frame = +2

Query: 251 INSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430
           + +MNWSVRPDKRFRLALGSFVEEYNNKVQ++ LDE++SEF  ++TFDHPYPTTK+MWIP
Sbjct: 19  VYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTKLMWIP 78

Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXIIXRILTSVLL--LHPLIGTKXIPNLI 604
           D+KGVYPDLLATSGDYLR+WR GE    + +  ++     S     L      +  P L+
Sbjct: 79  DTKGVYPDLLATSGDYLRVWRVGET--ETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLL 136

Query: 605 GTSSIDTTCTIWGLGDWTGLG 667
           GTSSIDTTCTIWGL     LG
Sbjct: 137 GTSSIDTTCTIWGLETGQVLG 157



 Score = 39.5 bits (88), Expect = 0.015
 Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 642 GLETGQVLGQ-GQ*SVWAREDSVDRSMDXGSVRH*RSVRAGGGRXMFASVGRRRSVRMF 815
           GLETGQVLG+    S   +   +    +   +      RAGGGR MFASVG   SVRMF
Sbjct: 149 GLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAF---SRAGGGRDMFASVGADGSVRMF 204



 Score = 31.1 bits (67), Expect = 5.3
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 213 KRKEIYKYQAPW 248
           KRKEIYKY+APW
Sbjct: 6   KRKEIYKYEAPW 17


>BC001264-1|AAH01264.1|  342|Homo sapiens WDR68 protein protein.
          Length = 342

 Score =  185 bits (450), Expect = 2e-46
 Identities = 88/141 (62%), Positives = 105/141 (74%), Gaps = 2/141 (1%)
 Frame = +2

Query: 251 INSMNWSVRPDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430
           + +MNWSVRPDKRFRLALGSFVEEYNNKVQ++ LDE++SEF  ++TFDHPYPTTK+MWIP
Sbjct: 19  VYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTKLMWIP 78

Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXIIXRILTSVLL--LHPLIGTKXIPNLI 604
           D+KGVYPDLLATSGDYLR+WR GE    + +  ++     S     L      +  P L+
Sbjct: 79  DTKGVYPDLLATSGDYLRVWRVGET--ETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLL 136

Query: 605 GTSSIDTTCTIWGLGDWTGLG 667
           GTSSIDTTCTIWGL     LG
Sbjct: 137 GTSSIDTTCTIWGLETGQVLG 157



 Score = 39.5 bits (88), Expect = 0.015
 Identities = 27/59 (45%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +3

Query: 642 GLETGQVLGQ-GQ*SVWAREDSVDRSMDXGSVRH*RSVRAGGGRXMFASVGRRRSVRMF 815
           GLETGQVLG+    S   +   +    +   +      RAGGGR MFASVG   SVRMF
Sbjct: 149 GLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAF---SRAGGGRDMFASVGADGSVRMF 204



 Score = 31.1 bits (67), Expect = 5.3
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +3

Query: 213 KRKEIYKYQAPW 248
           KRKEIYKY+APW
Sbjct: 6   KRKEIYKYEAPW 17


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,594,780
Number of Sequences: 237096
Number of extensions: 2905800
Number of successful extensions: 11007
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10996
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)