BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e40h0919 (847 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 147 1e-35 Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 80 2e-15 U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical pr... 31 1.4 AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical ... 30 2.4 AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical ... 30 2.4 Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical pr... 29 4.2 J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 5.5 AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 29 5.5 AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 29 5.5 Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 28 7.3 U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 28 7.3 U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 28 7.3 U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched fami... 28 9.6 >Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical protein F53C11.7 protein. Length = 478 Score = 147 bits (356), Expect = 1e-35 Identities = 72/140 (51%), Positives = 88/140 (62%), Gaps = 3/140 (2%) Frame = +2 Query: 257 SMNWSVR--PDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430 S WS P ++FRLA+ SF+EEY+NK+ I+ LDE+ E +STFDHPYP TKIMWIP Sbjct: 153 SHGWSAATDPSRKFRLAVSSFIEEYSNKIHIVQLDEEAGELVHRSTFDHPYPATKIMWIP 212 Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXI-IXRILTSVLLLHPLIGTKXIPNLIG 607 D KG +PDLLATSGDYLR+WR G + S + R L + NLIG Sbjct: 213 DQKGTFPDLLATSGDYLRLWRIGTDNNACIESLLNTNRTAEYCAPLTSFDWNELDMNLIG 272 Query: 608 TSSIDTTCTIWGLGDWTGLG 667 TSSIDTTCT+W L +G Sbjct: 273 TSSIDTTCTVWQLETGQAIG 292 >Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical protein F53C11.8 protein. Length = 388 Score = 80.2 bits (189), Expect = 2e-15 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 5/130 (3%) Frame = +2 Query: 266 WSVRPDKRFRLALGSFVE-EYN----NKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430 WS + D +FRLA+G+ + N NKV I+ L ++T E ++F +P + +IP Sbjct: 64 WSNKNDIKFRLAVGTVSDVSVNPCAANKVSIVQLKDETGELVETASFPMEFPANAVGFIP 123 Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXIIXRILTSVLLLHPLIGTKXIPNLIGT 610 D VYPDL+AT+ D LR+WR + + + I L + P IG Sbjct: 124 DPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTNSQYGSALTSFDWNELEPRYIGV 183 Query: 611 SSIDTTCTIW 640 SS+DTTCTI+ Sbjct: 184 SSVDTTCTIY 193 >U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical protein F31E8.1 protein. Length = 249 Score = 30.7 bits (66), Expect = 1.4 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 398 PYPTTKIMWIPDSKGVYPDLLATSGD 475 P P K+ W P ++P ++ATSGD Sbjct: 114 PLPAGKLRWGPQVPSLFPHVIATSGD 139 >AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical protein F37C4.4b protein. Length = 237 Score = 29.9 bits (64), Expect = 2.4 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Frame = -2 Query: 387 VLFAVNSLVSSSREIICT---LLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFL- 220 ++F + S V S +I T L YS K+ A N LSG F+ L ++ALG+C L Sbjct: 124 LVFCIMSAVGSLLAVITTGIWLDHYSKMKVRTAIGNGLSG----FMLLASVALGVCFILT 179 Query: 219 -YVSCLNWYSN 190 + C W SN Sbjct: 180 AVMICHYWNSN 190 >AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical protein F37C4.4a protein. Length = 249 Score = 29.9 bits (64), Expect = 2.4 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%) Frame = -2 Query: 387 VLFAVNSLVSSSREIICT---LLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFL- 220 ++F + S V S +I T L YS K+ A N LSG F+ L ++ALG+C L Sbjct: 136 LVFCIMSAVGSLLAVITTGIWLDHYSKMKVRTAIGNGLSG----FMLLASVALGVCFILT 191 Query: 219 -YVSCLNWYSN 190 + C W SN Sbjct: 192 AVMICHYWNSN 202 >Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical protein F49A5.4 protein. Length = 308 Score = 29.1 bits (62), Expect = 4.2 Identities = 10/35 (28%), Positives = 19/35 (54%) Frame = -2 Query: 279 GLTDQFIELMAMALGICIFLYVSCLNWYSNCCVAS 175 G F ++ + G C+FLY ++W+ N C+ + Sbjct: 261 GTPPLFTNMIQLENGNCLFLYNDYVHWFGNNCLTT 295 >J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain protein. Length = 1966 Score = 28.7 bits (61), Expect = 5.5 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Frame = +2 Query: 398 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIWRAGE 502 PY + K +WIPD + Y ++ AT GD + I A E Sbjct: 26 PYDSKKNVWIPDPEEGYLAGEITATKGDQVTIVTARE 62 >AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guanylate-binding protein protein. Length = 573 Score = 28.7 bits (61), Expect = 5.5 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = +1 Query: 637 LGAWRLDRSWGRVNEVSGHVKTQLIAPWXREVYDISVQ*GPAGGXI 774 LG W R G + E G+V + W + + GP GG I Sbjct: 499 LGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISPNANHLGPLGGAI 544 >AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical protein Y54G2A.2a protein. Length = 573 Score = 28.7 bits (61), Expect = 5.5 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = +1 Query: 637 LGAWRLDRSWGRVNEVSGHVKTQLIAPWXREVYDISVQ*GPAGGXI 774 LG W R G + E G+V + W + + GP GG I Sbjct: 499 LGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISPNANHLGPLGGAI 544 >Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein C06B8.7 protein. Length = 3118 Score = 28.3 bits (60), Expect = 7.3 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = -3 Query: 809 PDGPSAPHGSEHXSPPAGPY 750 P+ P+ PH S H P GPY Sbjct: 1930 PENPNHPHESIHPDTPNGPY 1949 >U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein 10 protein. Length = 294 Score = 28.3 bits (60), Expect = 7.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 815 KHPDGPSAPHGSEHXSPPAGP 753 K P+GP+ P G E + PAGP Sbjct: 146 KCPEGPAGPAGPEGPAGPAGP 166 >U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein 144 protein. Length = 306 Score = 28.3 bits (60), Expect = 7.3 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = -3 Query: 815 KHPDGPSAPHGSEHXSPPAGP 753 K P+GP+ P G E + PAGP Sbjct: 158 KCPEGPAGPAGPEGPAGPAGP 178 >U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched family protein 2 protein. Length = 936 Score = 27.9 bits (59), Expect = 9.6 Identities = 13/43 (30%), Positives = 27/43 (62%) Frame = -2 Query: 336 TLLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFLYVSC 208 ++L SST++ R +++S L +A++LGIC+ + ++C Sbjct: 752 SVLCLSSTEITRF-YDIVSQLRSSSFTSVAISLGICLIVIIAC 793 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,607,510 Number of Sequences: 27780 Number of extensions: 432320 Number of successful extensions: 1210 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1063 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1204 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2098003600 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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