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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0919
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79756-4|CAB02116.2|  478|Caenorhabditis elegans Hypothetical pr...   147   1e-35
Z79756-5|CAB02115.1|  388|Caenorhabditis elegans Hypothetical pr...    80   2e-15
U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF036705-2|AAM98021.1|  237|Caenorhabditis elegans Hypothetical ...    30   2.4  
AF036705-1|AAB95170.1|  249|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z81542-3|CAB04415.1|  308|Caenorhabditis elegans Hypothetical pr...    29   4.2  
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch...    29   5.5  
AF303255-1|AAG50213.1|  573|Caenorhabditis elegans putative guan...    29   5.5  
AC024817-7|AAK68527.1|  573|Caenorhabditis elegans Hypothetical ...    29   5.5  
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr...    28   7.3  
U50312-9|AAA92325.1|  294|Caenorhabditis elegans Collagen protei...    28   7.3  
U50312-7|AAA92323.2|  306|Caenorhabditis elegans Collagen protei...    28   7.3  
U50308-6|AAG24025.2|  936|Caenorhabditis elegans Dispatched fami...    28   9.6  

>Z79756-4|CAB02116.2|  478|Caenorhabditis elegans Hypothetical
           protein F53C11.7 protein.
          Length = 478

 Score =  147 bits (356), Expect = 1e-35
 Identities = 72/140 (51%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
 Frame = +2

Query: 257 SMNWSVR--PDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430
           S  WS    P ++FRLA+ SF+EEY+NK+ I+ LDE+  E   +STFDHPYP TKIMWIP
Sbjct: 153 SHGWSAATDPSRKFRLAVSSFIEEYSNKIHIVQLDEEAGELVHRSTFDHPYPATKIMWIP 212

Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXI-IXRILTSVLLLHPLIGTKXIPNLIG 607
           D KG +PDLLATSGDYLR+WR G   +    S +   R       L      +   NLIG
Sbjct: 213 DQKGTFPDLLATSGDYLRLWRIGTDNNACIESLLNTNRTAEYCAPLTSFDWNELDMNLIG 272

Query: 608 TSSIDTTCTIWGLGDWTGLG 667
           TSSIDTTCT+W L     +G
Sbjct: 273 TSSIDTTCTVWQLETGQAIG 292


>Z79756-5|CAB02115.1|  388|Caenorhabditis elegans Hypothetical
           protein F53C11.8 protein.
          Length = 388

 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
 Frame = +2

Query: 266 WSVRPDKRFRLALGSFVE-EYN----NKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430
           WS + D +FRLA+G+  +   N    NKV I+ L ++T E    ++F   +P   + +IP
Sbjct: 64  WSNKNDIKFRLAVGTVSDVSVNPCAANKVSIVQLKDETGELVETASFPMEFPANAVGFIP 123

Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXIIXRILTSVLLLHPLIGTKXIPNLIGT 610
           D   VYPDL+AT+ D LR+WR  +   + +   I          L      +  P  IG 
Sbjct: 124 DPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTNSQYGSALTSFDWNELEPRYIGV 183

Query: 611 SSIDTTCTIW 640
           SS+DTTCTI+
Sbjct: 184 SSVDTTCTIY 193


>U55856-7|AAA98025.1|  249|Caenorhabditis elegans Hypothetical
           protein F31E8.1 protein.
          Length = 249

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 398 PYPTTKIMWIPDSKGVYPDLLATSGD 475
           P P  K+ W P    ++P ++ATSGD
Sbjct: 114 PLPAGKLRWGPQVPSLFPHVIATSGD 139


>AF036705-2|AAM98021.1|  237|Caenorhabditis elegans Hypothetical
           protein F37C4.4b protein.
          Length = 237

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = -2

Query: 387 VLFAVNSLVSSSREIICT---LLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFL- 220
           ++F + S V S   +I T   L  YS  K+  A  N LSG    F+ L ++ALG+C  L 
Sbjct: 124 LVFCIMSAVGSLLAVITTGIWLDHYSKMKVRTAIGNGLSG----FMLLASVALGVCFILT 179

Query: 219 -YVSCLNWYSN 190
             + C  W SN
Sbjct: 180 AVMICHYWNSN 190


>AF036705-1|AAB95170.1|  249|Caenorhabditis elegans Hypothetical
           protein F37C4.4a protein.
          Length = 249

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
 Frame = -2

Query: 387 VLFAVNSLVSSSREIICT---LLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFL- 220
           ++F + S V S   +I T   L  YS  K+  A  N LSG    F+ L ++ALG+C  L 
Sbjct: 136 LVFCIMSAVGSLLAVITTGIWLDHYSKMKVRTAIGNGLSG----FMLLASVALGVCFILT 191

Query: 219 -YVSCLNWYSN 190
             + C  W SN
Sbjct: 192 AVMICHYWNSN 202


>Z81542-3|CAB04415.1|  308|Caenorhabditis elegans Hypothetical
           protein F49A5.4 protein.
          Length = 308

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -2

Query: 279 GLTDQFIELMAMALGICIFLYVSCLNWYSNCCVAS 175
           G    F  ++ +  G C+FLY   ++W+ N C+ +
Sbjct: 261 GTPPLFTNMIQLENGNCLFLYNDYVHWFGNNCLTT 295


>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
           protein.
          Length = 1966

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +2

Query: 398 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIWRAGE 502
           PY + K +WIPD +  Y   ++ AT GD + I  A E
Sbjct: 26  PYDSKKNVWIPDPEEGYLAGEITATKGDQVTIVTARE 62


>AF303255-1|AAG50213.1|  573|Caenorhabditis elegans putative
           guanylate-binding protein protein.
          Length = 573

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +1

Query: 637 LGAWRLDRSWGRVNEVSGHVKTQLIAPWXREVYDISVQ*GPAGGXI 774
           LG W   R  G + E  G+V   +   W   +   +   GP GG I
Sbjct: 499 LGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISPNANHLGPLGGAI 544


>AC024817-7|AAK68527.1|  573|Caenorhabditis elegans Hypothetical
           protein Y54G2A.2a protein.
          Length = 573

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +1

Query: 637 LGAWRLDRSWGRVNEVSGHVKTQLIAPWXREVYDISVQ*GPAGGXI 774
           LG W   R  G + E  G+V   +   W   +   +   GP GG I
Sbjct: 499 LGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISPNANHLGPLGGAI 544


>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
            C06B8.7 protein.
          Length = 3118

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 809  PDGPSAPHGSEHXSPPAGPY 750
            P+ P+ PH S H   P GPY
Sbjct: 1930 PENPNHPHESIHPDTPNGPY 1949


>U50312-9|AAA92325.1|  294|Caenorhabditis elegans Collagen protein
           10 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 815 KHPDGPSAPHGSEHXSPPAGP 753
           K P+GP+ P G E  + PAGP
Sbjct: 146 KCPEGPAGPAGPEGPAGPAGP 166


>U50312-7|AAA92323.2|  306|Caenorhabditis elegans Collagen protein
           144 protein.
          Length = 306

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 815 KHPDGPSAPHGSEHXSPPAGP 753
           K P+GP+ P G E  + PAGP
Sbjct: 158 KCPEGPAGPAGPEGPAGPAGP 178


>U50308-6|AAG24025.2|  936|Caenorhabditis elegans Dispatched family
           protein 2 protein.
          Length = 936

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/43 (30%), Positives = 27/43 (62%)
 Frame = -2

Query: 336 TLLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFLYVSC 208
           ++L  SST++ R   +++S L       +A++LGIC+ + ++C
Sbjct: 752 SVLCLSSTEITRF-YDIVSQLRSSSFTSVAISLGICLIVIIAC 793


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,607,510
Number of Sequences: 27780
Number of extensions: 432320
Number of successful extensions: 1210
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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