Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0919
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical pr... 147 1e-35
Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical pr... 31 1.4
AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical ... 30 2.4
AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical ... 30 2.4
Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical pr... 29 4.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 29 5.5
AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative guan... 29 5.5
AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical ... 29 5.5
Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical pr... 28 7.3
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 28 7.3
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 28 7.3
U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched fami... 28 9.6
>Z79756-4|CAB02116.2| 478|Caenorhabditis elegans Hypothetical
protein F53C11.7 protein.
Length = 478
Score = 147 bits (356), Expect = 1e-35
Identities = 72/140 (51%), Positives = 88/140 (62%), Gaps = 3/140 (2%)
Frame = +2
Query: 257 SMNWSVR--PDKRFRLALGSFVEEYNNKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430
S WS P ++FRLA+ SF+EEY+NK+ I+ LDE+ E +STFDHPYP TKIMWIP
Sbjct: 153 SHGWSAATDPSRKFRLAVSSFIEEYSNKIHIVQLDEEAGELVHRSTFDHPYPATKIMWIP 212
Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXI-IXRILTSVLLLHPLIGTKXIPNLIG 607
D KG +PDLLATSGDYLR+WR G + S + R L + NLIG
Sbjct: 213 DQKGTFPDLLATSGDYLRLWRIGTDNNACIESLLNTNRTAEYCAPLTSFDWNELDMNLIG 272
Query: 608 TSSIDTTCTIWGLGDWTGLG 667
TSSIDTTCT+W L +G
Sbjct: 273 TSSIDTTCTVWQLETGQAIG 292
>Z79756-5|CAB02115.1| 388|Caenorhabditis elegans Hypothetical
protein F53C11.8 protein.
Length = 388
Score = 80.2 bits (189), Expect = 2e-15
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Frame = +2
Query: 266 WSVRPDKRFRLALGSFVE-EYN----NKVQIISLDEDTSEFTAKSTFDHPYPTTKIMWIP 430
WS + D +FRLA+G+ + N NKV I+ L ++T E ++F +P + +IP
Sbjct: 64 WSNKNDIKFRLAVGTVSDVSVNPCAANKVSIVQLKDETGELVETASFPMEFPANAVGFIP 123
Query: 431 DSKGVYPDLLATSGDYLRIWRAGEPYHYSNVSXIIXRILTSVLLLHPLIGTKXIPNLIGT 610
D VYPDL+AT+ D LR+WR + + + I L + P IG
Sbjct: 124 DPDNVYPDLIATTSDCLRLWRVVDGKVHPDAVMINNTNSQYGSALTSFDWNELEPRYIGV 183
Query: 611 SSIDTTCTIW 640
SS+DTTCTI+
Sbjct: 184 SSVDTTCTIY 193
>U55856-7|AAA98025.1| 249|Caenorhabditis elegans Hypothetical
protein F31E8.1 protein.
Length = 249
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 398 PYPTTKIMWIPDSKGVYPDLLATSGD 475
P P K+ W P ++P ++ATSGD
Sbjct: 114 PLPAGKLRWGPQVPSLFPHVIATSGD 139
>AF036705-2|AAM98021.1| 237|Caenorhabditis elegans Hypothetical
protein F37C4.4b protein.
Length = 237
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -2
Query: 387 VLFAVNSLVSSSREIICT---LLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFL- 220
++F + S V S +I T L YS K+ A N LSG F+ L ++ALG+C L
Sbjct: 124 LVFCIMSAVGSLLAVITTGIWLDHYSKMKVRTAIGNGLSG----FMLLASVALGVCFILT 179
Query: 219 -YVSCLNWYSN 190
+ C W SN
Sbjct: 180 AVMICHYWNSN 190
>AF036705-1|AAB95170.1| 249|Caenorhabditis elegans Hypothetical
protein F37C4.4a protein.
Length = 249
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = -2
Query: 387 VLFAVNSLVSSSREIICT---LLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFL- 220
++F + S V S +I T L YS K+ A N LSG F+ L ++ALG+C L
Sbjct: 136 LVFCIMSAVGSLLAVITTGIWLDHYSKMKVRTAIGNGLSG----FMLLASVALGVCFILT 191
Query: 219 -YVSCLNWYSN 190
+ C W SN
Sbjct: 192 AVMICHYWNSN 202
>Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical
protein F49A5.4 protein.
Length = 308
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -2
Query: 279 GLTDQFIELMAMALGICIFLYVSCLNWYSNCCVAS 175
G F ++ + G C+FLY ++W+ N C+ +
Sbjct: 261 GTPPLFTNMIQLENGNCLFLYNDYVHWFGNNCLTT 295
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 398 PYPTTKIMWIPDSKGVY--PDLLATSGDYLRIWRAGE 502
PY + K +WIPD + Y ++ AT GD + I A E
Sbjct: 26 PYDSKKNVWIPDPEEGYLAGEITATKGDQVTIVTARE 62
>AF303255-1|AAG50213.1| 573|Caenorhabditis elegans putative
guanylate-binding protein protein.
Length = 573
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +1
Query: 637 LGAWRLDRSWGRVNEVSGHVKTQLIAPWXREVYDISVQ*GPAGGXI 774
LG W R G + E G+V + W + + GP GG I
Sbjct: 499 LGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISPNANHLGPLGGAI 544
>AC024817-7|AAK68527.1| 573|Caenorhabditis elegans Hypothetical
protein Y54G2A.2a protein.
Length = 573
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = +1
Query: 637 LGAWRLDRSWGRVNEVSGHVKTQLIAPWXREVYDISVQ*GPAGGXI 774
LG W R G + E G+V + W + + GP GG I
Sbjct: 499 LGVWAYSRYSGHLREAGGYVDDAVTYVWTNFISPNANHLGPLGGAI 544
>Z81463-4|CAB03852.2| 3118|Caenorhabditis elegans Hypothetical protein
C06B8.7 protein.
Length = 3118
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 809 PDGPSAPHGSEHXSPPAGPY 750
P+ P+ PH S H P GPY
Sbjct: 1930 PENPNHPHESIHPDTPNGPY 1949
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 815 KHPDGPSAPHGSEHXSPPAGP 753
K P+GP+ P G E + PAGP
Sbjct: 146 KCPEGPAGPAGPEGPAGPAGP 166
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 815 KHPDGPSAPHGSEHXSPPAGP 753
K P+GP+ P G E + PAGP
Sbjct: 158 KCPEGPAGPAGPEGPAGPAGP 178
>U50308-6|AAG24025.2| 936|Caenorhabditis elegans Dispatched family
protein 2 protein.
Length = 936
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = -2
Query: 336 TLLLYSSTKLPRANLNLLSGLTDQFIELMAMALGICIFLYVSC 208
++L SST++ R +++S L +A++LGIC+ + ++C
Sbjct: 752 SVLCLSSTEITRF-YDIVSQLRSSSFTSVAISLGICLIVIIAC 793
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,607,510
Number of Sequences: 27780
Number of extensions: 432320
Number of successful extensions: 1210
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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