Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0918
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683...   120   1e-27
04_03_0535 - 16850704-16853001,16854055-16854115,16854228-168543...    29   6.2  

>07_03_0405 -
           17767303-17767665,17767815-17768039,17768115-17768342,
           17768607-17768621,17768622-17768810,17769106-17769213,
           17769917-17770045
          Length = 418

 Score =  120 bits (289), Expect = 1e-27
 Identities = 73/164 (44%), Positives = 102/164 (62%), Gaps = 5/164 (3%)
 Frame = +1

Query: 277 ALFISSVAAQKAASNGFEIKAYDFPARKEECRKPRIVRLGLIQHSIAISTDNPITQQRLA 456
           A+ +    +  A ++ F+++A+ F A KE  R+PR++R+GLIQ+SIAI T +    Q+ A
Sbjct: 60  AISLPEATSALAKAHNFDVQAFRFDADKEYLRQPRVIRVGLIQNSIAIPTTSHFADQKKA 119

Query: 457 IFEKVQKIISAA--AAEQVIFFVYKKLG---TCPLAFCTREKQPWCDFXEXVLTGPSTVF 621
           I EKV+ +I AA  A   ++     +L    T P AFCTREK+ WC+F E V  G ST F
Sbjct: 120 IMEKVKPMIDAAGDAGVNILCLQVSQLSEAWTMPFAFCTREKR-WCEFAEPV-DGESTQF 177

Query: 622 LAELAVKYDMGIISPILXRDDIPXGY*FXNTAVVIHGILGKVLG 753
           L +LA KY+M I+SPIL R D+  G    NTAVVI G  G ++G
Sbjct: 178 LQQLAKKYNMVIVSPILER-DVNHGEIVWNTAVVI-GNHGNIIG 219


>04_03_0535 - 16850704-16853001,16854055-16854115,16854228-16854323,
            16854394-16854521,16855016-16855067,16855182-16855274,
            16855473-16855590,16856456-16856609,16857512-16857643,
            16859136-16859216,16859353-16859507,16860118-16860343,
            16860423-16860507,16860593-16860689,16861785-16861949,
            16862046-16862121,16863041-16863103,16863193-16863359,
            16863495-16863669,16863743-16863835,16864694-16864810,
            16865589-16865778,16866092-16866126
          Length = 1618

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +1

Query: 253  SYGRIDQCALFISSVAAQKAASNGFEIKAYDFPARKEECRK 375
            S GR +   L  S +    + S    IKAY    R E+CR+
Sbjct: 1195 SMGRTEDAKLVFSQMTEHDSGSYNLMIKAYADEGRLEDCRR 1235


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,747,295
Number of Sequences: 37544
Number of extensions: 389167
Number of successful extensions: 616
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 613
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)