Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0918
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical p...   128   4e-30
AL161712-13|CAC70137.1|  830|Caenorhabditis elegans Hypothetical...    28   7.4  
AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical ...    28   9.7  

>U23139-15|AAK31488.1|  387|Caenorhabditis elegans Hypothetical
           protein F13H8.7 protein.
          Length = 387

 Score =  128 bits (310), Expect = 4e-30
 Identities = 74/168 (44%), Positives = 105/168 (62%)
 Frame = +1

Query: 256 YGRIDQCALFISSVAAQKAASNGFEIKAYDFPARKEECRKPRIVRLGLIQHSIAISTDNP 435
           YGR  + AL ISS+A + A    F++  Y   A+KE+ R PR+VR+  IQ+ I   T + 
Sbjct: 32  YGRPYR-ALEISSIAEKLAQDGDFQLSGYIVDAQKEQTRAPRLVRVAAIQNKIHRPTTDS 90

Query: 436 ITQQRLAIFEKVQKIISAAAAEQVIFFVYKKLGTCPLAFCTREKQPWCDFXEXVLTGPST 615
           + +QR AI ++V  +I AAA+        ++  T P AFCTRE+ PW +F E V TGP+T
Sbjct: 91  VVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFCTRERLPWTEFAESVYTGPTT 150

Query: 616 VFLAELAVKYDMGIISPILXRDDIPXGY*FXNTAVVIHGILGKVLGKT 759
            FL++LAVK+D+ IISPIL RD+        NTAVVI    G+V+G++
Sbjct: 151 QFLSKLAVKHDIVIISPILERDEEKDDV-IWNTAVVI-SHTGRVIGRS 196


>AL161712-13|CAC70137.1|  830|Caenorhabditis elegans Hypothetical
           protein Y66D12A.17 protein.
          Length = 830

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 349 PARKEECRKPRIVRL-GLIQHSIAISTDNPITQQRLAIFEKVQKIISA 489
           P +K + R  RIV L  L  H++   T  P+T  ++AIF+ ++ +  A
Sbjct: 2   PPKKAQTR--RIVSLDSLFGHTLLNITGEPVTPTKIAIFQLIRTLFHA 47


>AF022981-4|AAG24205.1|  602|Caenorhabditis elegans Hypothetical
           protein W03F9.10 protein.
          Length = 602

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 313 ASNGFEIKAYDFPARKEECRKPRIVRLGLIQHSIAISTDNPITQQRLAIFE 465
           A+   EI+  + P ++EE      V +  I  +I I  DNP  Q   AIF+
Sbjct: 44  ATKQAEIETREEPKKEEENGDDLDVEIDYIGETIEIEPDNPHAQYFSAIFD 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,901,250
Number of Sequences: 27780
Number of extensions: 355564
Number of successful extensions: 795
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)