Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0917
(837 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 111 2e-23
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 107 5e-22
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 98 2e-19
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 97 4e-19
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 94 3e-18
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 94 4e-18
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 94 4e-18
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 93 8e-18
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 93 8e-18
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 93 1e-17
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 90 6e-17
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 89 1e-16
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 88 3e-16
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 88 3e-16
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 86 1e-15
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 85 2e-15
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 85 3e-15
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 84 5e-15
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 83 8e-15
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 82 1e-14
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 82 1e-14
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 80 8e-14
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 79 2e-13
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 79 2e-13
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 76 1e-12
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 75 2e-12
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 74 4e-12
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 74 5e-12
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 74 5e-12
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 73 9e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 73 1e-11
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 72 2e-11
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 69 1e-10
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 67 4e-10
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 67 4e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 67 6e-10
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 66 8e-10
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 66 1e-09
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 64 3e-09
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 64 4e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 62 1e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 62 2e-08
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 60 7e-08
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 59 2e-07
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 59 2e-07
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 58 3e-07
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 58 4e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 58 4e-07
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 56 8e-07
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 56 8e-07
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 56 8e-07
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 56 1e-06
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 55 2e-06
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 55 3e-06
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 54 3e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 54 4e-06
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 54 6e-06
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 53 8e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 1e-05
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 52 2e-05
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 52 2e-05
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 52 2e-05
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 51 3e-05
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 51 3e-05
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 51 4e-05
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 50 5e-05
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 50 5e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 50 7e-05
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 50 1e-04
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 50 1e-04
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 49 1e-04
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 49 1e-04
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 49 2e-04
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 49 2e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 49 2e-04
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 49 2e-04
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 48 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 48 4e-04
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 47 7e-04
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 46 9e-04
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 46 0.001
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 45 0.002
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 44 0.004
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 42 0.019
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 41 0.044
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 40 0.077
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 39 0.14
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 39 0.14
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 39 0.14
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 39 0.18
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 38 0.31
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 38 0.31
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 38 0.31
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 2.2
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 3.8
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 34 5.1
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 33 8.9
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 111 bits (268), Expect = 2e-23
Identities = 55/82 (67%), Positives = 63/82 (76%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 690
DQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FF
Sbjct: 176 DQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 235
Query: 691 GHPEV*XXNFTRIWXXFXILFP 756
GHP++ +F++ F +LFP
Sbjct: 236 GHPKL-MFSFSQDLVSFHMLFP 256
Score = 85.4 bits (202), Expect = 2e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 91 FPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 150
Query: 437 GIS 445
GIS
Sbjct: 151 GIS 153
Score = 77.8 bits (183), Expect = 3e-13
Identities = 42/82 (51%), Positives = 44/82 (53%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 8 NHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMV 67
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL+LGAPD+
Sbjct: 68 MPIMIGGFGNWLVPLMLGAPDM 89
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 107 bits (256), Expect = 5e-22
Identities = 50/65 (76%), Positives = 53/65 (81%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 690
DQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FF
Sbjct: 152 DQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFF 211
Query: 691 GHPEV 705
GHPEV
Sbjct: 212 GHPEV 216
Score = 85.4 bits (202), Expect = 2e-15
Identities = 43/63 (68%), Positives = 45/63 (71%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLA
Sbjct: 67 FPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLA 126
Query: 437 GIS 445
GIS
Sbjct: 127 GIS 129
Score = 62.9 bits (146), Expect = 1e-08
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDM 65
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 98.3 bits (234), Expect = 2e-19
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 183 RLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFG 242
Query: 694 HPEV 705
HPEV
Sbjct: 243 HPEV 246
Score = 70.1 bits (164), Expect = 6e-11
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+
Sbjct: 97 FPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLS 156
Query: 437 GIS 445
G+S
Sbjct: 157 GVS 159
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/84 (34%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 182
NHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 12 NHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFF 71
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N VP+++GAPD+
Sbjct: 72 MVMPAMIGGFGNWFVPILIGAPDM 95
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 97.5 bits (232), Expect = 4e-19
Identities = 45/66 (68%), Positives = 51/66 (77%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF F
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWF 237
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 238 FGHPEV 243
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GIS 445
GIS
Sbjct: 154 GIS 156
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/84 (36%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 94.3 bits (224), Expect = 3e-18
Identities = 52/100 (52%), Positives = 63/100 (63%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+D++ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF F
Sbjct: 162 MDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWF 221
Query: 688 FGHPEV*XXNFTRIWXXFXILFPPGXGKKGNFWVV*GXIY 807
FGHPEV ++F GKK F ++ G IY
Sbjct: 222 FGHPEVYILILPGFGIISHMIFNES-GKKETFGML-GMIY 259
Score = 64.1 bits (149), Expect = 4e-09
Identities = 32/63 (50%), Positives = 36/63 (57%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLA
Sbjct: 78 FPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLA 137
Query: 437 GIS 445
G S
Sbjct: 138 GAS 140
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDM 76
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 93.9 bits (223), Expect = 4e-18
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 694 HPEV 705
HPEV
Sbjct: 240 HPEV 243
Score = 73.7 bits (173), Expect = 5e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 437 GIS 445
G+S
Sbjct: 154 GVS 156
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/82 (45%), Positives = 42/82 (51%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 71 MPILIGGFGNWLVPLMIGAPDM 92
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 93.9 bits (223), Expect = 4e-18
Identities = 43/64 (67%), Positives = 50/64 (78%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFG
Sbjct: 188 RIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFG 247
Query: 694 HPEV 705
HPEV
Sbjct: 248 HPEV 251
Score = 68.1 bits (159), Expect = 3e-10
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++
Sbjct: 102 FPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHIS 161
Query: 437 GIS 445
G S
Sbjct: 162 GAS 164
Score = 52.8 bits (121), Expect = 1e-05
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
NHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 17 NHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFF 76
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N LVP+++G+PD+
Sbjct: 77 MVMPVMIGGFGNWLVPIMIGSPDM 100
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 93.1 bits (221), Expect = 8e-18
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 181 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 240
Query: 694 HPEV 705
HPEV
Sbjct: 241 HPEV 244
Score = 77.0 bits (181), Expect = 6e-13
Identities = 39/63 (61%), Positives = 43/63 (68%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLA
Sbjct: 95 FPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLA 154
Query: 437 GIS 445
GIS
Sbjct: 155 GIS 157
Score = 72.9 bits (171), Expect = 9e-12
Identities = 38/82 (46%), Positives = 43/82 (52%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 12 NHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMV 71
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDM 93
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 93.1 bits (221), Expect = 8e-18
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 694 HPEV 705
HPEV
Sbjct: 240 HPEV 243
Score = 72.9 bits (171), Expect = 9e-12
Identities = 35/63 (55%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLA 153
Query: 437 GIS 445
G+S
Sbjct: 154 GVS 156
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 11 NHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 71 MPIMIGGFGNWLVPLMIGAPDM 92
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 92.7 bits (220), Expect = 1e-17
Identities = 44/64 (68%), Positives = 48/64 (75%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFG
Sbjct: 180 QTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFG 239
Query: 694 HPEV 705
HPEV
Sbjct: 240 HPEV 243
Score = 73.7 bits (173), Expect = 5e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 94 FPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 153
Query: 437 GIS 445
G+S
Sbjct: 154 GVS 156
Score = 70.5 bits (165), Expect = 5e-11
Identities = 37/82 (45%), Positives = 42/82 (51%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 11 NHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMV 70
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 71 MPVMIGGFGNWLVPLMIGAPDM 92
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 90.2 bits (214), Expect = 6e-17
Identities = 43/61 (70%), Positives = 47/61 (77%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F G
Sbjct: 99 RMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXG 158
Query: 694 H 696
H
Sbjct: 159 H 159
Score = 69.7 bits (163), Expect = 8e-11
Identities = 37/62 (59%), Positives = 41/62 (66%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+A
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 437 GI 442
G+
Sbjct: 73 GV 74
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 89.4 bits (212), Expect = 1e-16
Identities = 40/66 (60%), Positives = 50/66 (75%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F F
Sbjct: 284 LHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWF 343
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 344 FGHPEV 349
Score = 53.6 bits (123), Expect = 6e-06
Identities = 23/63 (36%), Positives = 36/63 (57%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++
Sbjct: 200 FPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVS 259
Query: 437 GIS 445
G S
Sbjct: 260 GAS 262
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 87.8 bits (208), Expect = 3e-16
Identities = 40/63 (63%), Positives = 46/63 (73%)
Frame = +1
Query: 517 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 696
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 697 PEV 705
PEV
Sbjct: 245 PEV 247
Score = 62.5 bits (145), Expect = 1e-08
Identities = 32/62 (51%), Positives = 34/62 (54%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN F E G GTG TVYPPLSS +H G SVDL IFS HL
Sbjct: 98 FPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLV 157
Query: 437 GI 442
GI
Sbjct: 158 GI 159
Score = 40.7 bits (91), Expect = 0.044
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 TRNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 176
T NHK IG LY EL PG L G+ YN I T H
Sbjct: 11 TTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLML 70
Query: 177 XXXXXXXXXXXXXN*LVPLILGAPDI 254
N VP+++GAPD+
Sbjct: 71 FVVVMPILFGGFGNYFVPILIGAPDM 96
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 87.8 bits (208), Expect = 3e-16
Identities = 41/64 (64%), Positives = 48/64 (75%)
Frame = -1
Query: 447 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 268
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 267 IRGN 256
IRGN
Sbjct: 138 IRGN 141
Score = 84.2 bits (199), Expect = 4e-15
Identities = 47/93 (50%), Positives = 54/93 (58%)
Frame = -3
Query: 304 KGGG*ESKSYIIYSWECISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 125
K GG + +SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 124 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 26
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/58 (67%), Positives = 45/58 (77%)
Frame = -2
Query: 680 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SM 507
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G SM
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 85.8 bits (203), Expect = 1e-15
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF F
Sbjct: 221 LHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWF 280
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 281 FGHPEV 286
Score = 50.8 bits (116), Expect = 4e-05
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 424
FPR+NNI F V NGAGTG TVY PLS++ G +VD+AI S
Sbjct: 134 FPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILS 192
Query: 425 LHLAGIS 445
LH+AG S
Sbjct: 193 LHIAGAS 199
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 85.4 bits (202), Expect = 2e-15
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ +L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF F
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWF 238
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 239 FGHPEV 244
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+
Sbjct: 95 FPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLS 154
Query: 437 GIS 445
GIS
Sbjct: 155 GIS 157
Score = 47.2 bits (107), Expect = 5e-04
Identities = 29/83 (34%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 185
N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 11 NAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFM 70
Query: 186 XXXXXXXXXXN*LVPLILGAPDI 254
N L+PL LG PD+
Sbjct: 71 VMPALIGGFGNFLLPLGLGGPDM 93
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 84.6 bits (200), Expect = 3e-15
Identities = 39/64 (60%), Positives = 47/64 (73%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Query: 694 HPEV 705
HPEV
Sbjct: 241 HPEV 244
Score = 73.3 bits (172), Expect = 7e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 83.8 bits (198), Expect = 5e-15
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFG
Sbjct: 181 KMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFG 240
Query: 694 HPEV 705
HPEV
Sbjct: 241 HPEV 244
Score = 72.1 bits (169), Expect = 2e-11
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 95 FPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 83.0 bits (196), Expect = 8e-15
Identities = 40/62 (64%), Positives = 46/62 (74%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF F
Sbjct: 179 MSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWF 238
Query: 688 FG 693
FG
Sbjct: 239 FG 240
Score = 74.5 bits (175), Expect = 3e-12
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLA
Sbjct: 95 FPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLA 154
Query: 437 GIS 445
G+S
Sbjct: 155 GLS 157
Score = 63.3 bits (147), Expect = 7e-09
Identities = 32/82 (39%), Positives = 40/82 (48%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N VPL++GAPD+
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDM 93
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 82.2 bits (194), Expect = 1e-14
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ +L LF AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF F
Sbjct: 205 LHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWF 264
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 265 FGHPEV 270
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+
Sbjct: 121 FPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLS 180
Query: 437 GIS 445
GIS
Sbjct: 181 GIS 183
Score = 41.5 bits (93), Expect = 0.025
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 185
N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 37 NAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFM 96
Query: 186 XXXXXXXXXXN*LVPLILGAPDI 254
N L+P+++G PD+
Sbjct: 97 VMPALIGGFGNFLLPILIGGPDM 119
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 82.2 bits (194), Expect = 1e-14
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 681
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GIS 445
GIS
Sbjct: 154 GIS 156
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/84 (36%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 79.8 bits (188), Expect = 8e-14
Identities = 39/58 (67%), Positives = 43/58 (74%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 681
I+ + LFV +V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 161 IELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLA
Sbjct: 77 FPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLA 136
Query: 437 GIS 445
G+S
Sbjct: 137 GVS 139
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/53 (50%), Positives = 32/53 (60%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDI 254
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDM 75
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 694 HPEV 705
HPEV
Sbjct: 258 HPEV 261
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 78.6 bits (185), Expect = 2e-13
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Query: 694 HPEV 705
HPEV
Sbjct: 258 HPEV 261
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQHLF F
Sbjct: 188 LDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWF 247
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 248 FGHPEV 253
Score = 43.2 bits (97), Expect = 0.008
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 TRNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXX 176
T NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 18 TVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMI 77
Query: 177 XXXXXXXXXXXXXN*LVPLILGAPDI 254
N ++PL+LGAP++
Sbjct: 78 FFLVMPILIGGFGNWMLPLMLGAPEM 103
Score = 34.3 bits (75), Expect = 3.8
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+N + F + G G+ T YPPLS S+D I LH
Sbjct: 105 FPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTV 163
Query: 437 GI 442
GI
Sbjct: 164 GI 165
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 74.9 bits (176), Expect = 2e-12
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFG 240
Score = 73.3 bits (172), Expect = 7e-12
Identities = 38/63 (60%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 95 FPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 74.1 bits (174), Expect = 4e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Frame = +1
Query: 523 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 702
LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPE
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPE 245
Query: 703 V 705
V
Sbjct: 246 V 246
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + E G G G T+YP L H + D +F++HL
Sbjct: 97 FPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLL 156
Query: 437 GIS 445
GIS
Sbjct: 157 GIS 159
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 73.7 bits (173), Expect = 5e-12
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLA
Sbjct: 83 FPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLA 142
Query: 437 GIS 445
GIS
Sbjct: 143 GIS 145
Score = 67.7 bits (158), Expect = 3e-10
Identities = 35/81 (43%), Positives = 41/81 (50%)
Frame = +3
Query: 12 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 191
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 192 XXXXXXXXN*LVPLILGAPDI 254
N L+PL++GAPD+
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDM 81
Score = 49.6 bits (113), Expect = 1e-04
Identities = 26/43 (60%), Positives = 28/43 (65%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 642
Q PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 169 QTPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 73.7 bits (173), Expect = 5e-12
Identities = 35/60 (58%), Positives = 42/60 (70%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 181 KLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
Score = 70.9 bits (166), Expect = 4e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 95 FPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMT 154
Query: 437 GIS 445
IS
Sbjct: 155 SIS 157
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 72.9 bits (171), Expect = 9e-12
Identities = 31/38 (81%), Positives = 35/38 (92%)
Frame = +1
Query: 592 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEV
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEV 269
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/67 (49%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFS 424
FPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+
Sbjct: 123 FPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFA 182
Query: 425 LHLAGIS 445
LHL+G+S
Sbjct: 183 LHLSGVS 189
Score = 48.8 bits (111), Expect = 2e-04
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXX 185
N KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 39 NAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFM 98
Query: 186 XXXXXXXXXXN*LVPLILGAPDI 254
N L+PL++G PD+
Sbjct: 99 VMPALIGGFGNFLMPLMIGGPDM 121
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 72.5 bits (170), Expect = 1e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+
Sbjct: 94 FPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLS 153
Query: 437 GIS 445
GIS
Sbjct: 154 GIS 156
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/84 (36%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 583 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEV
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEV 333
Score = 37.5 bits (83), Expect = 0.41
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = +2
Query: 338 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 445
G G G T+YPPLS G VD +FSLHLAG+S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVS 251
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG 257
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF F
Sbjct: 194 LDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWF 253
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 254 FGHPEV 259
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 690
+ +PLF AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++
Sbjct: 185 ENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWW 244
Query: 691 GHPEV 705
HPEV
Sbjct: 245 NHPEV 249
Score = 60.9 bits (141), Expect = 4e-08
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
F R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+
Sbjct: 100 FARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLS 159
Query: 437 GIS 445
G S
Sbjct: 160 GFS 162
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 66.9 bits (156), Expect = 6e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1
Query: 583 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEV
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEV 246
Score = 50.0 bits (114), Expect = 7e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 439
PR+NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 440 IS 445
+S
Sbjct: 157 MS 158
Score = 37.1 bits (82), Expect = 0.55
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N +PL++ D+
Sbjct: 73 MPTSIGGLGNWFIPLMIKIKDL 94
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 66.5 bits (155), Expect = 8e-10
Identities = 33/61 (54%), Positives = 36/61 (59%)
Frame = +3
Query: 513 SITLICMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFW 692
SIT ICM C +Y TCFS S+Y IIN K KY IF W P +STFILIFW
Sbjct: 92 SITFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFW 151
Query: 693 T 695
T
Sbjct: 152 T 152
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 424
FPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 10 FPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = +1
Query: 517 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 696
L LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGH
Sbjct: 165 LSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGH 224
Query: 697 PEV 705
PEV
Sbjct: 225 PEV 227
Score = 35.1 bits (77), Expect = 2.2
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2
Query: 341 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 445
A G T YPPLSS SV+ ++FSLHLAGI+
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIA 142
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+
Sbjct: 112 FPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLS 171
Query: 437 GIS 445
G+S
Sbjct: 172 GLS 174
Score = 63.3 bits (147), Expect = 7e-09
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 681
+LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 198 KLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 64.1 bits (149), Expect = 4e-09
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +1
Query: 586 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEV
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEV 249
Score = 40.7 bits (91), Expect = 0.044
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHL 433
+PRIN+I E G GTG T+YPPLS+++ +VD+ IF L +
Sbjct: 99 YPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLV 158
Query: 434 AGIS 445
+G++
Sbjct: 159 SGVA 162
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/82 (45%), Positives = 42/82 (51%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 188
NHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 12 NHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMX 71
Query: 189 XXXXXXXXXN*LVPLILGAPDI 254
N LVPL++GAPD+
Sbjct: 72 MPIMIGGFGNWLVPLMIGAPDM 93
Score = 39.1 bits (87), Expect = 0.14
Identities = 19/40 (47%), Positives = 22/40 (55%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 376
FPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 95 FPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 62.1 bits (144), Expect = 2e-08
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +1
Query: 502 YIIDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 681
++ID++ ++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF
Sbjct: 182 FVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLF 241
Query: 682 *FFGHPEV 705
FFGHPEV
Sbjct: 242 WFFGHPEV 249
Score = 40.7 bits (91), Expect = 0.044
Identities = 22/63 (34%), Positives = 34/63 (53%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
+PR+N +E G+GTG T+YPPLS+++++ G +D IF L A
Sbjct: 102 YPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAA 159
Query: 437 GIS 445
GI+
Sbjct: 160 GIA 162
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 60.1 bits (139), Expect = 7e-08
Identities = 30/71 (42%), Positives = 40/71 (56%)
Frame = +1
Query: 493 IK*YIIDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 672
IK + +PLF A+ T+ A A+ +L D TSFF+P GGGDP++YQ
Sbjct: 184 IKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQ 243
Query: 673 HLF*FFGHPEV 705
HLF F+ HP V
Sbjct: 244 HLFWFYSHPAV 254
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 58.8 bits (136), Expect = 2e-07
Identities = 23/41 (56%), Positives = 33/41 (80%)
Frame = +1
Query: 583 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP V
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVV 199
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 58.8 bits (136), Expect = 2e-07
Identities = 53/181 (29%), Positives = 72/181 (39%), Gaps = 1/181 (0%)
Frame = +3
Query: 96 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIHSHE*II 275
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 276 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFHXXX 455
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 456 XXXXXXXXXXXXXXXXYH*SITLICMSCRDYSXXXXXXTTCFSWSYYNIINRS-KLKYII 632
+ + T IC+ Y TC S SYY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 633 F 635
+
Sbjct: 203 W 203
Score = 33.9 bits (74), Expect = 5.1
Identities = 23/63 (36%), Positives = 28/63 (44%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLA 436
FPR+NN+ F + G + PL G SVDLAIF LHLA
Sbjct: 78 FPRMNNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLA 135
Query: 437 GIS 445
G+S
Sbjct: 136 GVS 138
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 58.0 bits (134), Expect = 3e-07
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
++++PLFV + AF A LL DR+ T FF P GGD +L+QHLF F
Sbjct: 196 LNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWF 255
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 256 FGHPEV 261
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 57.6 bits (133), Expect = 4e-07
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = +1
Query: 616 NLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
N T+FFDPAGGGD IL+QHLF FFGHPEV
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEV 220
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 57.6 bits (133), Expect = 4e-07
Identities = 27/40 (67%), Positives = 30/40 (75%)
Frame = +2
Query: 326 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 445
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG S
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGAS 51
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/66 (40%), Positives = 38/66 (57%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++PLFV + + A A+ +LL DR L ++FFDP GG +L+QH F
Sbjct: 197 LQRVPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWI 256
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 257 FGHPEV 262
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +1
Query: 589 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEV
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEV 253
Score = 33.5 bits (73), Expect = 6.7
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHL 433
PR+N I F ++ +G T+YPPLS+ A G ++DL++ +H+
Sbjct: 105 PRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHV 164
Query: 434 AGIS 445
GIS
Sbjct: 165 LGIS 168
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 56.4 bits (130), Expect = 8e-07
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = +1
Query: 589 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEV
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEV 297
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/81 (35%), Positives = 39/81 (48%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++P+FV G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 694 HPEV*XXNFTRIWXXFXILFP 756
HP V ++ F LFP
Sbjct: 266 HPAV-YVLVLPVFGIFSELFP 285
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHL 678
+LPL + + +TA A +LL DR+ T FF GGGDPIL+QHL
Sbjct: 213 RLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHL 272
Query: 679 F*FFGHPEV 705
F FGHPEV
Sbjct: 273 FWIFGHPEV 281
Score = 33.1 bits (72), Expect = 8.9
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 257 FPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHL 433
FPR+N F G AG G T Y PLS+N+ G L + ++ +
Sbjct: 126 FPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFV 185
Query: 434 AGIS 445
G+S
Sbjct: 186 TGVS 189
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/39 (61%), Positives = 30/39 (76%)
Frame = +1
Query: 589 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHPEV
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHPEV 404
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 54.4 bits (125), Expect = 3e-06
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
++++P+FV AV + +F A +L DR FF A GDPIL+QHLF F
Sbjct: 201 LNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWF 259
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 260 FGHPEV 265
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 54.0 bits (124), Expect = 4e-06
Identities = 28/65 (43%), Positives = 37/65 (56%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 690
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 691 GHPEV 705
GH +V
Sbjct: 72 GHTDV 76
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 53.6 bits (123), Expect = 6e-06
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FF 690
++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF F+
Sbjct: 206 KMPLFVWAIYATS-CIQVLATPVIGLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFY 264
Query: 691 GHPEV 705
HP V
Sbjct: 265 SHPAV 269
Score = 33.5 bits (73), Expect = 6.7
Identities = 22/84 (26%), Positives = 29/84 (34%)
Frame = +3
Query: 3 TRNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 182
T +HK IG ++ EL PG I D YN T H
Sbjct: 39 TVDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMIFL 98
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N ++PL+LGA D+
Sbjct: 99 FMIPAIPAVFGNFMLPLMLGAKDV 122
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 53.2 bits (122), Expect = 8e-06
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 589 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
AI +LL DRN TSFF AG G IL+QHLF FFGHPEV
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEV 328
Score = 38.7 bits (86), Expect = 0.18
Identities = 23/84 (27%), Positives = 35/84 (41%)
Frame = +3
Query: 3 TRNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 182
T +HKDIG LY EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLF 149
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N L+PL++GA D+
Sbjct: 150 LFATPIIAAFSNYLIPLLIGADDM 173
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/66 (42%), Positives = 37/66 (56%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ Q+PL + ++ A A+ +LLTDR + FF+PA GGDPI Y HLF F
Sbjct: 180 LGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWF 239
Query: 688 FGHPEV 705
HPEV
Sbjct: 240 TFHPEV 245
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXX 182
NHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 13 NHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFF 72
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N VP+++G+PD+
Sbjct: 73 MVMPAMIGGFGNWFVPILIGSPDM 96
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 51.6 bits (118), Expect = 2e-05
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 5/46 (10%)
Frame = +1
Query: 583 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEV 705
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEV
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEV 253
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/64 (40%), Positives = 32/64 (50%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++PLFV TA + +R T FFD A GG P+L+Q LF FFG
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFG 237
Query: 694 HPEV 705
HPEV
Sbjct: 238 HPEV 241
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 51.2 bits (117), Expect = 3e-05
Identities = 27/66 (40%), Positives = 34/66 (51%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
ID+LP+ V + + A +L DRN T FFD A GG P+L+QHLF
Sbjct: 214 IDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWM 273
Query: 688 FGHPEV 705
F HP V
Sbjct: 274 FAHPWV 279
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/62 (45%), Positives = 33/62 (53%)
Frame = +2
Query: 260 PRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 439
PR+ N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 440 IS 445
IS
Sbjct: 145 IS 146
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/66 (39%), Positives = 36/66 (54%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++P+F A+ I A A +L +R+ FF GGDP+L+QHLF F
Sbjct: 204 LTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWF 263
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 264 FGHPEV 269
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 50.4 bits (115), Expect = 5e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F F+
Sbjct: 199 RLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYS 258
Query: 694 HPEV 705
HP V
Sbjct: 259 HPAV 262
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/84 (25%), Positives = 31/84 (36%)
Frame = +3
Query: 3 TRNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 182
T++HK IG ++ EL PG I D YN + T H
Sbjct: 32 TQDHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMIFL 91
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N L+P+++GA D+
Sbjct: 92 FMIPAIPSGFGNFLLPIMIGAKDV 115
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 50.4 bits (115), Expect = 5e-05
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = +1
Query: 610 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
+R + FFDP GGDP+L+QHLF FGHPEV
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEV 285
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 50.0 bits (114), Expect = 7e-05
Identities = 31/84 (36%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +3
Query: 9 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 182
N KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 9 NAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFF 68
Query: 183 XXXXXXXXXXXN*LVPLILGAPDI 254
N LVP+++GAPD+
Sbjct: 69 MVMPAMVGGFGNYLVPVMIGAPDM 92
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 511 DQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
++L +FV A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F
Sbjct: 179 NKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWF 237
Query: 688 FGHPEV 705
+ HP V
Sbjct: 238 YSHPAV 243
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FF 690
++P+F ++ T +LL DRNL T FF +PAGG +L+ HLF FF
Sbjct: 189 KMPMFTWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
Query: 691 GHPEV 705
GHPEV
Sbjct: 247 GHPEV 251
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
+LPLF + + + +++ DR T+FF+P GG+ ++++HLF FG
Sbjct: 189 RLPLFTWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFG 248
Query: 694 HPEV 705
HPEV
Sbjct: 249 HPEV 252
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/64 (32%), Positives = 36/64 (56%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++P++V +V + A ++L +R + S+F+PA GGDP+L+Q F F+
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYS 249
Query: 694 HPEV 705
HP V
Sbjct: 250 HPTV 253
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++P+F A+ + A A +L +R + FF GGDP+L+QHLF F
Sbjct: 263 LGRMPVFAWAMLVFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWF 322
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 323 FGHPEV 328
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 48.8 bits (111), Expect = 2e-04
Identities = 32/74 (43%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPI 663
+LPL + A ITA A +L+ DR+L TSFF AG GG P+
Sbjct: 232 RLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPV 291
Query: 664 LYQHLF*FFGHPEV 705
L+QHLF F GHPEV
Sbjct: 292 LFQHLFWFLGHPEV 305
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/66 (37%), Positives = 35/66 (53%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++P+ + + TAF +L +R L FFD GGDP+L+QHLF
Sbjct: 220 LTKMPILMWYLLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWL 279
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 280 FGHPEV 285
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 48.8 bits (111), Expect = 2e-04
Identities = 26/46 (56%), Positives = 29/46 (63%), Gaps = 10/46 (21%)
Frame = +1
Query: 598 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEV 705
+LL DR L TSFF P GGG P+L+QHLF FFGHPEV
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEV 283
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 694 HPEV 705
HPEV
Sbjct: 260 HPEV 263
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.0 bits (109), Expect = 3e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 531 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 683
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++P+F + + + A +L DR L +DPA GG +L+QHLF FFG
Sbjct: 206 RMPIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFG 264
Query: 694 HPEV 705
HPEV
Sbjct: 265 HPEV 268
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 46.8 bits (106), Expect = 7e-04
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDP 660
+LPL + A+ ITA A ++L DR + T FF P AGGG P
Sbjct: 218 RLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQP 277
Query: 661 ILYQHLF*FFGHPEV 705
+L+QHLF F+ HP V
Sbjct: 278 LLWQHLFWFYSHPAV 292
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 46.4 bits (105), Expect = 9e-04
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+ ++P+F +TA +L +R + FF A GGD +L+QHLF
Sbjct: 194 LSKMPIFAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWL 253
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 254 FGHPEV 259
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 368 PLSSNIAHRGRSVDLAIFSLHLAGIS 445
PL+S+IAH G SVD+AIFSLHLAG+S
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVS 97
Score = 35.5 bits (78), Expect = 1.7
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 615
+D++PLF+ AV IT AGAIT+LLTDR
Sbjct: 119 LDRVPLFIWAVFITTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 45.2 bits (102), Expect = 0.002
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = +3
Query: 615 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLXFXF 719
K KYIIF S W F+STFILIFWT SL F F
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNF 41
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 44.4 bits (100), Expect = 0.004
Identities = 23/66 (34%), Positives = 33/66 (50%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 687
+D++P++ +TA +L +R FF A GGD +L+QHLF
Sbjct: 194 LDRMPIYGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWL 253
Query: 688 FGHPEV 705
FGHPEV
Sbjct: 254 FGHPEV 259
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 41.9 bits (94), Expect = 0.019
Identities = 24/50 (48%), Positives = 28/50 (56%), Gaps = 11/50 (22%)
Frame = +1
Query: 589 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEV 705
A +L DR TSFF P+G GG +L+QHLF FFGHPEV
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEV 291
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 40.7 bits (91), Expect = 0.044
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++P+F ++ T+ A + + L S F+P GG P+LYQ F F+
Sbjct: 198 KMPVFAWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYS 257
Query: 694 HPEV 705
HP V
Sbjct: 258 HPAV 261
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 39.9 bits (89), Expect = 0.077
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +1
Query: 589 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
A+ +L DR L T FF GG+ +LY +LF +GHPEV
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEV 306
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +1
Query: 586 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEV
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEV 288
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.1 bits (87), Expect = 0.14
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 259 PTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 429
P NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 39.1 bits (87), Expect = 0.14
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 693
++P+F IT A+ +L DR FF GG P+L+ +LF +G
Sbjct: 220 RMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWG 279
Query: 694 HPEV 705
HPEV
Sbjct: 280 HPEV 283
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 38.7 bits (86), Expect = 0.18
Identities = 24/70 (34%), Positives = 36/70 (51%)
Frame = +1
Query: 496 K*YIIDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQH 675
K Y + LPLFV AV A G +LL ++ S++ GG +++++
Sbjct: 204 KGYRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWEN 262
Query: 676 LF*FFGHPEV 705
LF +FGHPEV
Sbjct: 263 LFWYFGHPEV 272
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 37.9 bits (84), Expect = 0.31
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Frame = +1
Query: 514 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GGDP 660
+LP+ + + ITA + + DR T FF P+G GG P
Sbjct: 221 RLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGGQP 280
Query: 661 ILYQHLF*FFGHPEV 705
+L+QHLF F+ HP V
Sbjct: 281 LLWQHLFWFYSHPAV 295
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 37.9 bits (84), Expect = 0.31
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Frame = +1
Query: 517 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 663
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 664 LYQHLF*FFGHPEV 705
L+ HLF FFGHPEV
Sbjct: 252 LWAHLFWFFGHPEV 265
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 37.9 bits (84), Expect = 0.31
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +1
Query: 589 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
A+ +L DR L+ F GG+P++Y +LF +GHPEV
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEV 287
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.1 bits (77), Expect = 2.2
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +1
Query: 508 IDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 627
+D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 162 MDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 3.8
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 8 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 91
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 33.9 bits (74), Expect = 5.1
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +1
Query: 601 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 705
+ DR L+T F+ GG +LY +L +GHPEV
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEV 282
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 33.1 bits (72), Expect = 8.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 517 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 696
+PLF TA L DR L+ FF GG+ + + ++F FGH
Sbjct: 245 MPLFTWTALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGH 304
Query: 697 PEV 705
PEV
Sbjct: 305 PEV 307
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,982,524
Number of Sequences: 1657284
Number of extensions: 11239389
Number of successful extensions: 20691
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 19693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20606
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72963732758
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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