Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0916
(832 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.38
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.66
SB_14492| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_48578| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.6
SB_55803| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_58680| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.13) 29 4.6
SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8) 29 4.6
SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 28 8.1
SB_39878| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 28 8.1
SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32) 28 8.1
SB_16652| Best HMM Match : I-set (HMM E-Value=1.2e-37) 28 8.1
SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33) 28 8.1
>SB_41301| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 32.7 bits (71), Expect = 0.38
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Frame = -1
Query: 472 SPSDGTPANRLRPSARASA--NTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQA 299
SP++ T N L + R ++ NT+ L+ R N ++ + ++ NTT NS P
Sbjct: 4 SPTNTTRHNSLNNTTRHNSLPNTTRHNSLH-NTTRHNSLPNTTRHNSLPNTTRHNSLPNT 62
Query: 298 ISTLSLPSTITH--PPN 254
SLP+T H PPN
Sbjct: 63 TRYNSLPNTTRHNSPPN 79
Score = 28.7 bits (61), Expect = 6.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 376 RRNCTSHSILYANVCNTTMKNSTPQAISTLSLPSTITH 263
R N ++ Y ++ NTT NS P SLP+T H
Sbjct: 55 RHNSLPNTTRYNSLPNTTRHNSPPNTTRHNSLPNTTRH 92
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/101 (26%), Positives = 42/101 (41%)
Frame = -1
Query: 457 TPANRLRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLSLP 278
TP+ PS R++ +T S P + L + S N +T STP +ST P
Sbjct: 188 TPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPS----MPNTPSTPSTPSTPSTLSTPITP 243
Query: 277 STITHPPNDQINLLSQTLWRGICRSPRTCPCSLSALTTGTT 155
ST + P + T S + PC+ + +T +T
Sbjct: 244 STPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPST 284
Score = 31.9 bits (69), Expect = 0.66
Identities = 27/101 (26%), Positives = 42/101 (41%)
Frame = -1
Query: 457 TPANRLRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLSLP 278
TP+ PS R++ +T S P + L + S N +T STP +ST P
Sbjct: 738 TPSTPSTPSTRSTPSTPSTPSTPSTLSMPSTPS----MPNTPSTPSTPSTPSTLSTPITP 793
Query: 277 STITHPPNDQINLLSQTLWRGICRSPRTCPCSLSALTTGTT 155
ST + P + T S + PC+ + +T +T
Sbjct: 794 STPSTPSTPSTPSMPSTPSTPSTPSTPSTPCTPNTPSTPST 834
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = -1
Query: 457 TPANRLRPSARASANTSS*P--PLNAKLRRRNCTSHSILYANVCNTTMKNSTPQAISTLS 284
TP+ + PS ++ T S P P CT + + +T STP A ST S
Sbjct: 47 TPSTPITPSTPSTPCTHSTPSAPSTPSTPSTPCTPSTPSTPSTPSTPSTPSTPSAPSTPS 106
Query: 283 LPSTITHP 260
PST + P
Sbjct: 107 TPSTPSTP 114
>SB_14492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 30.3 bits (65), Expect = 2.0
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 6/122 (4%)
Frame = +2
Query: 254 IRRMCYGARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGI--ERRLTAGVGGGP 427
+ R+C R + L H+ +D + +T T P+P+ R LT
Sbjct: 714 VHRLC--TRDLVVAHILEEDNAHAYTSDYKRLFTTSETEPTPERPPPPSRELTMASRASR 771
Query: 428 S*RAQSVRGRA----VARREQTEDVLGNSPVHPAGLHVHHALKI*NLIPADHTRSSREHL 595
+ RA S + + Q +++ P P GLH+ H+ +L A SS L
Sbjct: 772 ASRAASQASQRGWDPILAGYQAREIMSREPT-PGGLHMEHSYLPMDLNSASSENSSVVEL 830
Query: 596 DD 601
DD
Sbjct: 831 DD 832
>SB_10171| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1
Query: 376 RRNCTSHSILYANVCNTTMKNSTPQAISTLSLPSTITH--PPN 254
R N +++ + ++ NTT NS P SLP+T H PPN
Sbjct: 118 RHNSLTNTTRHNSLNNTTRHNSLPNTTRHNSLPNTTRHNSPPN 160
>SB_48578| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.9 bits (64), Expect = 2.6
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = -1
Query: 472 SPSDGTPANRLRPSARASA--NTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQA 299
SP++ T N L + R ++ NT+ L R N +++ + ++ NTT NS P
Sbjct: 4 SPTNTTRHNSLTNTTRHNSLTNTTRNNSL-PNTTRHNSLTNTTRHNSLPNTTRHNSLPNT 62
Query: 298 ISTLSLPSTITH---PPNDQINLLSQT 227
SLP+T H P + N L+ T
Sbjct: 63 TRHNSLPNTTRHNSLPNTTRHNSLTNT 89
>SB_55803| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 190
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 415 NTSS*PPLNAKLRRRNCTSHSILYANVC-NTTMKNSTPQAISTLSLPSTITHPPNDQINL 239
NT+ LN+ R N T H+ L+ NTT NS SLP+T H +L
Sbjct: 66 NTTRHNSLNSTTRH-NTTRHNSLHNTTKHNTTRHNSLHNTTRHNSLPNTTRHNTTRHNSL 124
Query: 238 LSQTLWRGICRSPRT 194
S T+ + + RT
Sbjct: 125 NSTTMHNSLPNTIRT 139
>SB_58680| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.13)
Length = 660
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 389 IERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVLGNSPVH--PAGLHVHH-ALKI*NLI 559
+ +R G+G GP RA RA+AR DVL S VH G ++ H A + N I
Sbjct: 184 LTQRKVIGLGLGPLNRANYTLIRAIAR----SDVLARSGVHVTQLGTNIEHIASCVQNKI 239
Query: 560 PADHTRSSR 586
A+ R R
Sbjct: 240 TAERIRRMR 248
>SB_30255| Best HMM Match : Keratin_B2 (HMM E-Value=3.8)
Length = 304
Score = 29.1 bits (62), Expect = 4.6
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Frame = -1
Query: 469 PSDGT-PANRLRPSA--RASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQA 299
P D T P+N RP++ + N +S A++ CT + + C+ + +TP
Sbjct: 31 PDDVTEPSNERRPASQNKTCPNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPR 90
Query: 298 ISTLSLPSTITHPPNDQINLLSQTLWRGICRSPRTCP 188
S L P T P + + + L R + TCP
Sbjct: 91 PSELPFPFT----PANNTKMKAWLLNRYASSTFNTCP 123
>SB_31262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 29.1 bits (62), Expect = 4.6
Identities = 26/72 (36%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -1
Query: 475 FSPSDGTPANRLRPSARAS--ANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQ 302
F+ + GTPA R S + A SS L R TS S + + STP
Sbjct: 165 FTAAAGTPAGSRRSSISPASPALRSSLGSLAPTSRTSTPTSRSTPRSRSRSRARTPSTPS 224
Query: 301 AISTLSLPSTIT 266
ST S PSTIT
Sbjct: 225 TPSTPSTPSTIT 236
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/70 (28%), Positives = 28/70 (40%)
Frame = -3
Query: 680 WYRLRTVSTRTSIRADSFVPVAHRHQYHQDAPEKILYDLQE*DFKS*ERDEHEGQQDGPA 501
W RL + T I + VPV R + + P KI + D +G GP
Sbjct: 830 WGRLASGGTAPDILQQASVPVVSRARCEKAYPGKIHDSMLCAGLDQGGIDTCQGDSGGPM 889
Query: 500 SCQVRLRFVL 471
C+ R RF +
Sbjct: 890 VCESRGRFYI 899
>SB_39878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1052
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +3
Query: 291 VDIACGVLFFIVVLQTFAYSILWDVQFL 374
V +A +L FIVV TF+ I+W ++FL
Sbjct: 219 VSLAWPILVFIVVAATFSGIIIWLLKFL 246
>SB_18397| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1626
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -1
Query: 550 SNLKSVMNMKASRMDRRVAKYVFG 479
SNL + +N+K SR++RRV + ++G
Sbjct: 396 SNLLTKLNLKPSRVERRVIEQMYG 419
>SB_35488| Best HMM Match : Peptidase_A17 (HMM E-Value=8.1e-32)
Length = 1019
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -1
Query: 550 SNLKSVMNMKASRMDRRVAKYVFG 479
SNL + +N+K SR++RRV + ++G
Sbjct: 83 SNLLTKLNLKPSRVERRVIEQMYG 106
>SB_16652| Best HMM Match : I-set (HMM E-Value=1.2e-37)
Length = 552
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 346 YANVC-NTTMKNSTPQAISTLSLPSTITHPPNDQINLLSQTLWRGICRSPRTCPCSLS 176
YA V NT + T+ P TITHPP+D + + + C + T P ++S
Sbjct: 150 YACVASNTAGTGDNSSVVITVQDPPTITHPPSD-VTVARGSAASLSCNASGTPPLNIS 206
>SB_11559| Best HMM Match : Peptidase_A17 (HMM E-Value=3.8e-33)
Length = 1485
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -1
Query: 550 SNLKSVMNMKASRMDRRVAKYVFG 479
SNL + +N+K SR++RRV + ++G
Sbjct: 290 SNLLTKLNLKPSRVERRVIEQMYG 313
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,118,285
Number of Sequences: 59808
Number of extensions: 603981
Number of successful extensions: 1762
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1703
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2335516755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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