Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0916
(832 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membra... 128 2e-29
BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein. 128 2e-29
BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein. 128 2e-29
AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein. 128 2e-29
AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein. 110 7e-24
AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein. 110 7e-24
AM080251-1|CAL04397.1| 101|Homo sapiens immunoglobulin heavy ch... 35 0.42
AJ519258-1|CAD60319.1| 119|Homo sapiens immunoglobulin heavy ch... 32 2.2
AM079615-1|CAL03761.1| 100|Homo sapiens immunoglobulin heavy ch... 32 2.9
AF471286-1|AAQ05461.1| 126|Homo sapiens Ig heavy chain variable... 32 2.9
U27189-1|AAA86893.1| 123|Homo sapiens Ig heavy chain protein. 31 5.1
AM079605-1|CAL03751.1| 101|Homo sapiens immunoglobulin heavy ch... 31 5.1
AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member ... 31 5.1
AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7 p... 31 5.1
AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transpor... 31 5.1
AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein. 31 5.1
U00511-1|AAA17923.1| 116|Homo sapiens immunoglobulin heavy chai... 31 6.8
DQ926143-1|ABI50596.1| 121|Homo sapiens immunoglobulin heavy ch... 31 6.8
AY003757-1|AAK18723.1| 108|Homo sapiens immunoglobulin alpha he... 31 6.8
AY003724-1|AAF85724.1| 107|Homo sapiens immunoglobulin alpha he... 31 6.8
AM083257-1|CAL07403.1| 101|Homo sapiens immunoglobulin heavy ch... 31 6.8
AM081976-1|CAL06122.1| 101|Homo sapiens immunoglobulin heavy ch... 31 6.8
AM081698-1|CAL05844.1| 101|Homo sapiens immunoglobulin heavy ch... 31 6.8
AM080594-1|CAL04740.1| 101|Homo sapiens immunoglobulin heavy ch... 31 6.8
AM080329-1|CAL04475.1| 101|Homo sapiens immunoglobulin heavy ch... 31 6.8
AM079906-1|CAL04052.1| 100|Homo sapiens immunoglobulin heavy ch... 31 6.8
AF471335-1|AAQ05510.1| 116|Homo sapiens Ig heavy chain variable... 31 6.8
BX537787-1|CAD97843.1| 895|Homo sapiens hypothetical protein pr... 30 8.9
BC036216-1|AAH36216.1| 913|Homo sapiens cullin 4B protein. 30 8.9
AY365125-1|AAR13073.1| 895|Homo sapiens cullin 4B protein. 30 8.9
AM082560-1|CAL06706.1| 101|Homo sapiens immunoglobulin heavy ch... 30 8.9
AM082059-1|CAL06205.1| 100|Homo sapiens immunoglobulin heavy ch... 30 8.9
AM081299-1|CAL05445.1| 100|Homo sapiens immunoglobulin heavy ch... 30 8.9
AL451005-1|CAI41370.1| 913|Homo sapiens cullin 4B protein. 30 8.9
>Y14820-1|CAA75099.1| 254|Homo sapiens surface 4 integral membrane
protein protein.
Length = 254
Score = 128 bits (310), Expect = 2e-29
Identities = 60/125 (48%), Positives = 85/125 (68%)
Frame = +3
Query: 255 LGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAE 434
L GCV+VL R V AC LF I+ LQT AYSILWD++FL+RN E+R+E
Sbjct: 71 LTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLVLAESRSE 130
Query: 435 GRSLFAGVPSLGENKPKTYLATRRSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTV 614
G+S+FAGVP++ E+ PK Y+ +LL MF+TLL F+ SF I+Q+++G+ LMILV +
Sbjct: 131 GKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAI 190
Query: 615 GYRNE 629
G++ +
Sbjct: 191 GFKTK 195
Score = 107 bits (256), Expect = 6e-23
Identities = 47/68 (69%), Positives = 53/68 (77%)
Frame = +1
Query: 49 TAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGKFLATM 228
TAED ADQ +R K LP VARLCLISTFL DG+RMWFQWSEQRDY+D +W CG LA+
Sbjct: 2 TAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGYLLASS 61
Query: 229 FVIVNLFG 252
FV +NL G
Sbjct: 62 FVFLNLLG 69
>BC111023-1|AAI11024.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 128 bits (310), Expect = 2e-29
Identities = 60/125 (48%), Positives = 85/125 (68%)
Frame = +3
Query: 255 LGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAE 434
L GCV+VL R V AC LF I+ LQT AYSILWD++FL+RN E+R+E
Sbjct: 78 LTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSE 137
Query: 435 GRSLFAGVPSLGENKPKTYLATRRSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTV 614
G+S+FAGVP++ E+ PK Y+ +LL MF+TLL F+ SF I+Q+++G+ LMILV +
Sbjct: 138 GKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAI 197
Query: 615 GYRNE 629
G++ +
Sbjct: 198 GFKTK 202
Score = 110 bits (264), Expect = 7e-24
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGK 213
N+ + TAED ADQ +R K LP VARLCLISTFL DG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 214 FLATMFVIVNLFG 252
LA+ FV +NL G
Sbjct: 64 LLASSFVFLNLLG 76
>BC018741-1|AAH18741.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 128 bits (310), Expect = 2e-29
Identities = 60/125 (48%), Positives = 85/125 (68%)
Frame = +3
Query: 255 LGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAE 434
L GCV+VL R V AC LF I+ LQT AYSILWD++FL+RN E+R+E
Sbjct: 78 LTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSE 137
Query: 435 GRSLFAGVPSLGENKPKTYLATRRSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTV 614
G+S+FAGVP++ E+ PK Y+ +LL MF+TLL F+ SF I+Q+++G+ LMILV +
Sbjct: 138 GKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAI 197
Query: 615 GYRNE 629
G++ +
Sbjct: 198 GFKTK 202
Score = 110 bits (264), Expect = 7e-24
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGK 213
N+ + TAED ADQ +R K LP VARLCLISTFL DG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 214 FLATMFVIVNLFG 252
LA+ FV +NL G
Sbjct: 64 LLASSFVFLNLLG 76
>AL158826-15|CAI12840.1| 269|Homo sapiens surfeit 4 protein.
Length = 269
Score = 128 bits (310), Expect = 2e-29
Identities = 60/125 (48%), Positives = 85/125 (68%)
Frame = +3
Query: 255 LGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAE 434
L GCV+VL R V AC LF I+ LQT AYSILWD++FL+RN E+R+E
Sbjct: 78 LTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSE 137
Query: 435 GRSLFAGVPSLGENKPKTYLATRRSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTV 614
G+S+FAGVP++ E+ PK Y+ +LL MF+TLL F+ SF I+Q+++G+ LMILV +
Sbjct: 138 GKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASFFSIVQNIVGTALMILVAI 197
Query: 615 GYRNE 629
G++ +
Sbjct: 198 GFKTK 202
Score = 110 bits (264), Expect = 7e-24
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGK 213
N+ + TAED ADQ +R K LP VARLCLISTFL DG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 214 FLATMFVIVNLFG 252
LA+ FV +NL G
Sbjct: 64 LLASSFVFLNLLG 76
>AL158826-16|CAI12841.1| 186|Homo sapiens surfeit 4 protein.
Length = 186
Score = 110 bits (264), Expect = 7e-24
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGK 213
N+ + TAED ADQ +R K LP VARLCLISTFL DG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 214 FLATMFVIVNLFG 252
LA+ FV +NL G
Sbjct: 64 LLASSFVFLNLLG 76
Score = 105 bits (252), Expect = 2e-22
Identities = 51/102 (50%), Positives = 67/102 (65%)
Frame = +3
Query: 255 LGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAE 434
L GCV+VL R V AC LF I+ LQT AYSILWD++FL+RN E+R+E
Sbjct: 78 LTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSE 137
Query: 435 GRSLFAGVPSLGENKPKTYLATRRSILLAFMFITLLRFEISF 560
G+S+FAGVP++ E+ PK Y+ +LL MF+TLL F+ SF
Sbjct: 138 GKSMFAGVPTMRESSPKQYMQLGGRVLLVLMFMTLLHFDASF 179
>AL158826-14|CAI12839.1| 188|Homo sapiens surfeit 4 protein.
Length = 188
Score = 110 bits (264), Expect = 7e-24
Identities = 48/73 (65%), Positives = 56/73 (76%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGK 213
N+ + TAED ADQ +R K LP VARLCLISTFL DG+RMWFQWSEQRDY+D +W CG
Sbjct: 4 NDLMGTAEDFADQFLRVTKQYLPHVARLCLISTFLEDGIRMWFQWSEQRDYIDTTWNCGY 63
Query: 214 FLATMFVIVNLFG 252
LA+ FV +NL G
Sbjct: 64 LLASSFVFLNLLG 76
Score = 85.0 bits (201), Expect = 3e-16
Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 LGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAE 434
L GCV+VL R V AC LF I+ LQT AYSILWD++FL+RN E+R+E
Sbjct: 78 LTGCVLVLSRNFVQYACFGLFGIIALQTIAYSILWDLKFLMRNLALGGGLLLLLAESRSE 137
Query: 435 GRSLFAGVPSLGENKPK-TYLATRR 506
G+S+FAGVP++ E+ PK T LA R
Sbjct: 138 GKSMFAGVPTMRESSPKHTCLAKTR 162
>AM080251-1|CAL04397.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 34.7 bits (76), Expect = 0.42
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S T T R P G+E G GGGP+ A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGFTFSSYAMTWVRQAPGK--GLEWVSIIGAGGGPTYYADSVK 68
Query: 452 GRAVARREQTEDVL 493
GR R+ ++D L
Sbjct: 69 GRFTISRDNSKDTL 82
>AJ519258-1|CAD60319.1| 119|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 119
Score = 32.3 bits (70), Expect = 2.2
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S T + Y M +P G+E T G GGG + A SV+
Sbjct: 12 GGGLVQPGGSLRLSCAASGFTFSK--YAMDWVRQAPGKGLEWVSTFGAGGGSTYYADSVK 69
Query: 452 GRAVARREQTEDVL 493
GR R+ +++ L
Sbjct: 70 GRFTISRDNSKNTL 83
>AM079615-1|CAL03761.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 31.9 bits (69), Expect = 2.9
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S T I T R P G+E T +G G + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCATSGFTFINYPMTWVRQAPGK--GLEWASTISIGDGATYYADSVK 68
Query: 452 GRAVARREQTEDVL 493
GR R+ +++ L
Sbjct: 69 GRFTVSRDNSKNTL 82
>AF471286-1|AAQ05461.1| 126|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 126
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
Y M +P G+E GGG S A SV+GR R+ +E++L
Sbjct: 32 YAMNWVRQAPGKGLEWVAVISAGGGNSYYADSVKGRFTISRDNSENIL 79
>U27189-1|AAA86893.1| 123|Homo sapiens Ig heavy chain protein.
Length = 123
Score = 31.1 bits (67), Expect = 5.1
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S T I Y MG +P G+E GG S A SV+
Sbjct: 8 GGGLVQPGGSLRLSCAASGFTFIN--YAMGWVRQAPGEGLEWVSGISGSGGTSHSADSVK 65
Query: 452 GRAVARREQTEDVL 493
GR RE +++ L
Sbjct: 66 GRFTISRENSKNTL 79
>AM079605-1|CAL03751.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 31.1 bits (67), Expect = 5.1
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
Y M +P G+E + G GG S A SV+GRA R+ +++ L
Sbjct: 35 YVMSWVRQAPGRGLEWASSIGGSGGNSHYADSVKGRATISRDNSKNTL 82
>AF328787-1|AAK00959.1| 2146|Homo sapiens ABC transporter member 7
protein.
Length = 2146
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 510 WTGELPSTSSVCSLRATARPRTDCALQLGPPPTP 409
WT E PS + CS R DC G PP P
Sbjct: 1336 WTPESPSPACQCSRPGARRLLPDCPAAAGGPPPP 1369
>AF311102-1|AAN04657.1| 2146|Homo sapiens ABC transporter ABCA7
protein.
Length = 2146
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 510 WTGELPSTSSVCSLRATARPRTDCALQLGPPPTP 409
WT E PS + CS R DC G PP P
Sbjct: 1336 WTPESPSPACQCSRPGARRLLPDCPAAAGGPPPP 1369
>AF250238-1|AAF85794.1| 2146|Homo sapiens macrophage ABC transporter
protein.
Length = 2146
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 510 WTGELPSTSSVCSLRATARPRTDCALQLGPPPTP 409
WT E PS + CS R DC G PP P
Sbjct: 1336 WTPESPSPACQCSQPGARRLLPDCPAAAGGPPPP 1369
>AB055390-1|BAB62294.1| 2008|Homo sapiens ABCA-SSN protein.
Length = 2008
Score = 31.1 bits (67), Expect = 5.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -2
Query: 510 WTGELPSTSSVCSLRATARPRTDCALQLGPPPTP 409
WT E PS + CS R DC G PP P
Sbjct: 1198 WTPESPSPACQCSQPGARRLLPDCPAAAGGPPPP 1231
>U00511-1|AAA17923.1| 116|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 116
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/74 (33%), Positives = 35/74 (47%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + + S IT +TM SP G+E T VGG S A +V+
Sbjct: 8 GGGLIQPGGSLRLSCVASGITFS--SHTMNWVRQSPGKGLEWISTIYVGGTSSYYADAVK 65
Query: 452 GRAVARREQTEDVL 493
GR R+ +++ L
Sbjct: 66 GRFTVSRDNSKNTL 79
>DQ926143-1|ABI50596.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
YTM +P G+E GGG S A SV+GR R+ +++ L
Sbjct: 32 YTMNWVRQAPGRGLEWLSVTSGGGGTSFYADSVKGRFTISRDNSKNTL 79
>AY003757-1|AAK18723.1| 108|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 108
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
Y M +P G+E + GVGGG + A SV+GR R+ ++ L
Sbjct: 4 YAMTWVRQAPGKGLEWVSSIGVGGGNTYYADSVKGRFTISRDNSKSTL 51
>AY003724-1|AAF85724.1| 107|Homo sapiens immunoglobulin alpha heavy
chain variable region protein.
Length = 107
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
Y M +P G+E + GVGGG + A SV+GR R+ ++ L
Sbjct: 3 YAMTWVRQAPGKGLEWVSSIGVGGGNTYYADSVKGRFTISRDNSKSTL 50
>AM083257-1|CAL07403.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 6.8
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S T Y M +P G+E T GGG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASAFTFSN--YAMNWVRQAPGKGLEWVSTVSSGGGSTYYADSVK 68
Query: 452 GRAVARREQTEDVL 493
GR R+ +++ L
Sbjct: 69 GRFTISRDNSKNTL 82
>AM081976-1|CAL06122.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 6.8
Identities = 25/80 (31%), Positives = 34/80 (42%)
Frame = +2
Query: 254 IRRMCYGARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS* 433
+R + G Q G LR + S T R Y M +P G+E T GG +
Sbjct: 5 VRLLESGGGMVQPGGSLRLSCAASGFTFSR--YAMSWVRQAPGKGLEWVSTVSTGGDKTY 62
Query: 434 RAQSVRGRAVARREQTEDVL 493
A SV+GR R+ + D L
Sbjct: 63 YAGSVKGRFTISRDNSMDTL 82
>AM081698-1|CAL05844.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 6.8
Identities = 23/74 (31%), Positives = 32/74 (43%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G QSG LR + S T T R P G+E + GGG + A SV+
Sbjct: 11 GGGLVQSGGSLRLSCAASRFTFTTTAMTWVRQAPGK--GLEWVSSINAGGGATYYADSVK 68
Query: 452 GRAVARREQTEDVL 493
GR R+ +++ L
Sbjct: 69 GRFTISRDNSKNTL 82
>AM080594-1|CAL04740.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 6.8
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S +T R Y M +P G+E T GG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGLTFSR--YAMSWVRQAPGKGLEWVSTISAAGGDTCYADSVK 68
Query: 452 GRAVARREQTEDVL 493
GR R+ +++ L
Sbjct: 69 GRFTISRDNSQNTL 82
>AM080329-1|CAL04475.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S +T R Y M +P G+E G GG + A SV+
Sbjct: 11 GGGLVQPGGSLRLSCAASGLT-FR-NYAMSWVRQAPGKGLEWVSVIGASGGSAYYADSVK 68
Query: 452 GRAVARREQTEDVL 493
GR R+ + D L
Sbjct: 69 GRFTISRDNSRDTL 82
>AM079906-1|CAL04052.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 30.7 bits (66), Expect = 6.8
Identities = 24/74 (32%), Positives = 31/74 (41%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + S T Y M +P G+E T GGP+ A SVR
Sbjct: 11 GGNLVQPGGSLRLSCAASGFTFS--SYAMSWVRQAPGKGLEWVSTISDSGGPTYYADSVR 68
Query: 452 GRAVARREQTEDVL 493
GR R+ + + L
Sbjct: 69 GRFTISRDTSRNTL 82
>AF471335-1|AAQ05510.1| 116|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 116
Score = 30.7 bits (66), Expect = 6.8
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +2
Query: 272 GARKAQSGYRLRRAVLHSCITDIRVQYTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVR 451
G Q G LR + + S T T R P G+E + G GGP+ A SV+
Sbjct: 8 GGDLVQPGGSLRLSCVASGFTFRTYVVTWVRQAPGK--GLEWVASIGATGGPTYYADSVK 65
Query: 452 GRAVARREQTEDVL 493
GR R+ +++ L
Sbjct: 66 GRFTISRDNSKNTL 79
>BX537787-1|CAD97843.1| 895|Homo sapiens hypothetical protein
protein.
Length = 895
Score = 30.3 bits (65), Expect = 8.9
Identities = 25/90 (27%), Positives = 36/90 (40%)
Frame = -1
Query: 481 GLFSPSDGTPANRLRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQ 302
G SPS A + NTS+ PP +AK R+ N +S S ++ N
Sbjct: 5 GFSSPSPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSS-------SSNSSNERED 57
Query: 301 AISTLSLPSTITHPPNDQINLLSQTLWRGI 212
ST S ST P D + + + G+
Sbjct: 58 FDSTSSSSSTPPLQPRDSASPSTSSFCLGV 87
>BC036216-1|AAH36216.1| 913|Homo sapiens cullin 4B protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.9
Identities = 25/90 (27%), Positives = 36/90 (40%)
Frame = -1
Query: 481 GLFSPSDGTPANRLRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQ 302
G SPS A + NTS+ PP +AK R+ N +S S ++ N
Sbjct: 23 GFSSPSPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSS-------SSNSSNERED 75
Query: 301 AISTLSLPSTITHPPNDQINLLSQTLWRGI 212
ST S ST P D + + + G+
Sbjct: 76 FDSTSSSSSTPPLQPRDSASPSTSSFCLGV 105
>AY365125-1|AAR13073.1| 895|Homo sapiens cullin 4B protein.
Length = 895
Score = 30.3 bits (65), Expect = 8.9
Identities = 25/90 (27%), Positives = 36/90 (40%)
Frame = -1
Query: 481 GLFSPSDGTPANRLRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQ 302
G SPS A + NTS+ PP +AK R+ N +S S ++ N
Sbjct: 5 GFSSPSPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSS-------SSNSSNERED 57
Query: 301 AISTLSLPSTITHPPNDQINLLSQTLWRGI 212
ST S ST P D + + + G+
Sbjct: 58 FDSTSSSSSTPPLQPRDSASPSTSSFCLGV 87
>AM082560-1|CAL06706.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 30.3 bits (65), Expect = 8.9
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
Y M +P G+E T GGG + A SV+GR R+ +++ L
Sbjct: 35 YAMSWVRQAPGKGLEWVSTVSAGGGTAYYADSVKGRFTISRDNSKNTL 82
>AM082059-1|CAL06205.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
YTM +P G+E T G GG + A SV+GR R+ +++ L
Sbjct: 35 YTMSWVRQAPGRGLEWVSTIGNSGGRTYYADSVKGRFTISRDNSKNTL 82
>AM081299-1|CAL05445.1| 100|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 100
Score = 30.3 bits (65), Expect = 8.9
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +2
Query: 350 YTMGRTVPSPQFGIERRLTAGVGGGPS*RAQSVRGRAVARREQTEDVL 493
Y M +P G+E T GGG + A SV+GR R+ +E+ L
Sbjct: 35 YAMSWVRQAPGKGLEWVSTISGGGGSTYYADSVKGRFTISRDNSENTL 82
>AL451005-1|CAI41370.1| 913|Homo sapiens cullin 4B protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.9
Identities = 25/90 (27%), Positives = 36/90 (40%)
Frame = -1
Query: 481 GLFSPSDGTPANRLRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQ 302
G SPS A + NTS+ PP +AK R+ N +S S ++ N
Sbjct: 23 GFSSPSPSAAAAAQEVRSATDGNTSTTPPTSAKKRKLNSSSSS-------SSNSSNERED 75
Query: 301 AISTLSLPSTITHPPNDQINLLSQTLWRGI 212
ST S ST P D + + + G+
Sbjct: 76 FDSTSSSSSTPPLQPRDSASPSTSSFCLGV 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,187,917
Number of Sequences: 237096
Number of extensions: 2959149
Number of successful extensions: 18040
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 17490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18038
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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