Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0916
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14949-1|CAA75173.1| 277|Caenorhabditis elegans SURF-4 protein ... 118 5e-27
U58728-5|AAB00591.1| 277|Caenorhabditis elegans Surfeit homolog... 118 5e-27
Z81581-7|CAB04659.1| 269|Caenorhabditis elegans Hypothetical pr... 55 7e-08
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 29 5.4
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 29 5.4
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 29 5.4
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 29 5.4
AC024746-6|AAT92059.1| 1361|Caenorhabditis elegans Patched famil... 29 5.4
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 28 7.1
AC024746-5|AAT92058.1| 1358|Caenorhabditis elegans Patched famil... 28 7.1
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 28 9.4
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 28 9.4
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 9.4
>Y14949-1|CAA75173.1| 277|Caenorhabditis elegans SURF-4 protein
protein.
Length = 277
Score = 118 bits (284), Expect = 5e-27
Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Frame = +3
Query: 267 VMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAEGRSL 446
+M++ R KV +ACG+L IV+LQT AY ILWD++FL RN E + E SL
Sbjct: 89 LMIMLRKKVLVACGILASIVILQTIAYHILWDLKFLARNIAVGGGLLLLLAETQEEKASL 148
Query: 447 FAGVPSLGE-NKPKTYLATRRSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYR 623
FAGVP++G+ NKPK+Y+ +LL FMF++L+ FE+SF+Q+++ ++G L+ LV++GY+
Sbjct: 149 FAGVPTMGDSNKPKSYMLLAGRVLLIFMFMSLMHFEMSFMQVLEIVVGFALITLVSIGYK 208
Query: 624 NE 629
+
Sbjct: 209 TK 210
Score = 98.3 bits (234), Expect = 6e-21
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGK 213
NE ++ ED A+ RK + LP +ARLCL+STFL DG+RM+FQW +Q+ +M SW CG
Sbjct: 11 NEMLAKREDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQKQFMQESWSCGW 70
Query: 214 FLATMFVIVNLFG 252
F+AT+FVI N FG
Sbjct: 71 FIATLFVIYNFFG 83
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 682 NAWWAVPSLQTASETSSNNDFFPDIVSIGXLLMIVYLGAG 801
NAWW +PS DFF + IG LL+++ G G
Sbjct: 228 NAWWTIPS-DRFYRDFMKYDFFQTMSVIGGLLLVIAYGPG 266
>U58728-5|AAB00591.1| 277|Caenorhabditis elegans Surfeit homolog
protein 4 protein.
Length = 277
Score = 118 bits (284), Expect = 5e-27
Identities = 55/122 (45%), Positives = 85/122 (69%), Gaps = 1/122 (0%)
Frame = +3
Query: 267 VMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNXXXXXXXXXXXXEARAEGRSL 446
+M++ R KV +ACG+L IV+LQT AY ILWD++FL RN E + E SL
Sbjct: 89 LMIMLRKKVLVACGILASIVILQTIAYHILWDLKFLARNIAVGGGLLLLLAETQEEKASL 148
Query: 447 FAGVPSLGE-NKPKTYLATRRSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYR 623
FAGVP++G+ NKPK+Y+ +LL FMF++L+ FE+SF+Q+++ ++G L+ LV++GY+
Sbjct: 149 FAGVPTMGDSNKPKSYMLLAGRVLLIFMFMSLMHFEMSFMQVLEIVVGFALITLVSIGYK 208
Query: 624 NE 629
+
Sbjct: 209 TK 210
Score = 100 bits (239), Expect = 1e-21
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGCGK 213
NE ++ AED A+ RK + LP +ARLCL+STFL DG+RM+FQW +Q+ +M SW CG
Sbjct: 11 NEMLAKAEDAAEDFFRKTRTYLPHIARLCLVSTFLEDGIRMYFQWDDQKQFMQESWSCGW 70
Query: 214 FLATMFVIVNLFG 252
F+AT+FVI N FG
Sbjct: 71 FIATLFVIYNFFG 83
Score = 32.3 bits (70), Expect = 0.44
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +1
Query: 682 NAWWAVPSLQTASETSSNNDFFPDIVSIGXLLMIVYLGAG 801
NAWW +PS DFF + IG LL+++ G G
Sbjct: 228 NAWWTIPS-DRFYRDFMKYDFFQTMSVIGGLLLVIAYGPG 266
>Z81581-7|CAB04659.1| 269|Caenorhabditis elegans Hypothetical
protein T02E1.7 protein.
Length = 269
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Frame = +1
Query: 34 NEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLXDGLRMWFQWSEQRDYMDMSWGC-- 207
N ++ ED + + R + VLPT+ RL LISTF+ DGLR+ F + ++ +WG
Sbjct: 4 NVVITRCEDYTETLARNTRKVLPTIGRLLLISTFVEDGLRLLFNTHDHVNHFSYNWGLNY 63
Query: 208 --GKFLATMFVIVNLFG 252
FL + +I LFG
Sbjct: 64 HFSLFLTIVMIINLLFG 80
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 472 SPSDGTPANR--LRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQA 299
S S+G+ A+ SA +S++T+S PP + +S ++ N TM P
Sbjct: 216 SVSEGSAASEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTVNVNGKRNMTMDLGLPHR 275
Query: 298 ISTLSLPSTI 269
L LPS I
Sbjct: 276 PKALGLPSRI 285
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 472 SPSDGTPANR--LRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQA 299
S S+G+ A+ SA +S++T+S PP + +S ++ N TM P
Sbjct: 320 SVSEGSAASEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTVNVNGKRNMTMDLGLPHR 379
Query: 298 ISTLSLPSTI 269
L LPS I
Sbjct: 380 PKALGLPSRI 389
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 472 SPSDGTPANR--LRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQA 299
S S+G+ A+ SA +S++T+S PP + +S ++ N TM P
Sbjct: 371 SVSEGSAASEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTVNVNGKRNMTMDLGLPHR 430
Query: 298 ISTLSLPSTI 269
L LPS I
Sbjct: 431 PKALGLPSRI 440
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = -1
Query: 472 SPSDGTPANR--LRPSARASANTSS*PPLNAKLRRRNCTSHSILYANVCNTTMKNSTPQA 299
S S+G+ A+ SA +S++T+S PP + +S ++ N TM P
Sbjct: 371 SVSEGSAASEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTVNVNGKRNMTMDLGLPHR 430
Query: 298 ISTLSLPSTI 269
L LPS I
Sbjct: 431 PKALGLPSRI 440
>AC024746-6|AAT92059.1| 1361|Caenorhabditis elegans Patched family
protein 3, isoform b protein.
Length = 1361
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +3
Query: 537 LLRFEISFLQIIQDLLGSILMILVTVGYRNEAVCSDACPRTDSSQSVP*RLVGGAILTNR 716
LL F + FL I + I + G R+ A CS P+ +SQSVP + +++R
Sbjct: 761 LLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVPSNVSNNTQMSSR 820
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = -1
Query: 469 PSDGTPANRLRPSARASANTSS*PPLNAKLRRRNCT-SHSILYANVCNTTMKNSTPQAIS 293
P+ +P +P + ++++TSS P N R T S S NV TT T A
Sbjct: 266 PTATSPKTSSQPVSSSTSSTSSPAPTNPPTTSRPTTASQSTASQNVETTTKLGLT--ASI 323
Query: 292 TLSLPSTITH 263
T+S+ +T+ H
Sbjct: 324 TVSIMTTLLH 333
>AC024746-5|AAT92058.1| 1358|Caenorhabditis elegans Patched family
protein 3, isoform a protein.
Length = 1358
Score = 28.3 bits (60), Expect = 7.1
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = +3
Query: 537 LLRFEISFLQIIQDLLGSILMILVTVGYRNEAVCSDACPRTDSSQSVP 680
LL F + FL I + I + G R+ A CS P+ +SQSVP
Sbjct: 761 LLAFNLIFLMFIFPAMIGIDLRRQRKGKRDLAYCSRGNPQMATSQSVP 808
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 504 RSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYRNEAVCSDA 647
+S ++A + L RF +F+QI + L +++++ R EAV S A
Sbjct: 235 KSDIVAMLICMLTRFVQNFMQISIETLAPAMLMMMYFQTRQEAVASMA 282
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 504 RSILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYRNEAVCSDA 647
+S ++A + L RF +F+QI + L +++++ R EAV S A
Sbjct: 235 KSDIVAMLICMLTRFVQNFMQISIETLAPAMLMMMYFQTRQEAVASMA 282
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 19 KMQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCL 123
K + N ++S ++ D + G +LPTVA+L +
Sbjct: 1295 KAAVCNAFISGLPEILDMNLHTGNQLLPTVAQLLI 1329
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 19 KMQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCL 123
K + N ++S ++ D + G +LPTVA+L +
Sbjct: 76 KAAVCNAFISGLPEILDMNLHTGNQLLPTVAQLLI 110
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 19 KMQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCL 123
K + N ++S ++ D + G +LPTVA+L +
Sbjct: 1295 KAAVCNAFISGLPEILDMNLHTGNQLLPTVAQLLI 1329
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 19 KMQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCL 123
K + N ++S ++ D + G +LPTVA+L +
Sbjct: 76 KAAVCNAFISGLPEILDMNLHTGNQLLPTVAQLLI 110
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +1
Query: 19 KMQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCL 123
K + N ++S ++ D + G +LPTVA+L +
Sbjct: 1298 KAAVCNAFISGLPEILDMNLHTGNQLLPTVAQLLI 1332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,697,948
Number of Sequences: 27780
Number of extensions: 432862
Number of successful extensions: 1404
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1402
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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