Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0915
(838 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 155 4e-38
SB_6286| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 7e-25
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 76 4e-14
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 64 1e-10
SB_6665| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 8e-07
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 50 3e-06
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 41 0.001
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 39 0.004
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 36 0.041
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.041
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 33 0.29
SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1) 28 8.2
SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 155 bits (376), Expect = 4e-38
Identities = 76/107 (71%), Positives = 79/107 (73%)
Frame = +1
Query: 517 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 696
VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSD+GGCKEQI+KLREVVETPLLHPE+F
Sbjct: 51 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDIGGCKEQIDKLREVVETPLLHPERF 110
Query: 697 VKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
V LGI TGKT FIRVIGSELV K
Sbjct: 111 VNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 157
>SB_6286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 102
Score = 111 bits (267), Expect = 7e-25
Identities = 56/74 (75%), Positives = 56/74 (75%)
Frame = +2
Query: 287 IKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINVKQFAKFVVD 466
IKESDTG KQTL EQPLQVARCTKIINADS D KYIINVKQFAKFVVD
Sbjct: 26 IKESDTGLAPPALWDLAADKQTLHGEQPLQVARCTKIINADSEDAKYIINVKQFAKFVVD 85
Query: 467 LQDSVAPTDIEEGM 508
L D VAPTDIEEGM
Sbjct: 86 LGDQVAPTDIEEGM 99
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 77.0 bits (181), Expect = 2e-14
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Frame = +1
Query: 565 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXX 744
DP VT+M++E+ P +Y+D+GG QI++++E VE PL HPE + ++GI
Sbjct: 363 DPMVTVMKLEKAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGQ 422
Query: 745 XXTGKTCVLAPSPTGXTPA-FIRVIGSELVPK 837
TGKT +LA + T A F+RV+GSEL+ K
Sbjct: 423 PGTGKT-LLAKAVANQTSATFLRVVGSELIQK 453
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/93 (43%), Positives = 53/93 (56%)
Frame = +1
Query: 559 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXX 738
++DP V++M VE+ PD TY VGG +QI++++EV+E P+ HPE F LGI
Sbjct: 158 EVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLY 217
Query: 739 XXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
TGKT + FIRV GSELV K
Sbjct: 218 GPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 250
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 75.8 bits (178), Expect = 4e-14
Identities = 38/96 (39%), Positives = 55/96 (57%)
Frame = +1
Query: 550 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXX 729
LPP+ D ++ M+ EEKP+V+Y+++GG Q +++RE VE PL H E + ++GI
Sbjct: 142 LPPEADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGV 201
Query: 730 XXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
GKT + T AFIRV+GSE V K
Sbjct: 202 LLYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQK 237
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 64.1 bits (149), Expect = 1e-10
Identities = 31/67 (46%), Positives = 43/67 (64%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
V +D I LP ++DP V M E+ +++YSDVGG EQI +LREV+E PL +PE
Sbjct: 100 VALDMTTLTIMRYLPREVDPLVYNMSHEDPGNISYSDVGGLSEQIRELREVIELPLTNPE 159
Query: 691 KFVKLGI 711
F ++GI
Sbjct: 160 LFQRVGI 166
>SB_6665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 51.6 bits (118), Expect = 8e-07
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = +2
Query: 431 INVKQFAKFVVDLQDSVAPTDIEEGM 508
INVKQFAKFVVDL D VAPTDIEEGM
Sbjct: 63 INVKQFAKFVVDLGDQVAPTDIEEGM 88
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = +1
Query: 565 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXX 744
+P+ V E P+V++ D+GG + +L+E+V+ P+ HP+KF+K G+
Sbjct: 293 NPSALRETVVEVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGP 352
Query: 745 XXTGKTCVLAPSPTGXTPAFIRVIGSELV 831
GKT + FI + G EL+
Sbjct: 353 PGCGKTLLAKAIANECQANFISIKGPELL 381
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = +1
Query: 565 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLRE 660
+P + E +V Y D+GGC++Q+ +++E
Sbjct: 141 EPVKREEEEESLNEVGYDDIGGCRKQLAQIKE 172
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/81 (38%), Positives = 37/81 (45%)
Frame = +1
Query: 595 EKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLA 774
E P V +SDVGG + KL+E VE PL HPE F +LGI KT +
Sbjct: 530 EVPKVHWSDVGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIAR 589
Query: 775 PSPTGXTPAFIRVIGSELVPK 837
T FI + G EL K
Sbjct: 590 ALATESGLNFIAIKGPELFSK 610
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +1
Query: 592 EEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVL 771
E K V++ +GG K QI+ +RE++E PL +PE F G+ TGKT +
Sbjct: 248 EAKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSGTGKTMIA 307
Query: 772 APSPTGXTPAFIRVIGSELVPK 837
F + G E++ +
Sbjct: 308 RAVANETGVHFFCINGPEVLSR 329
>SB_5903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 46.4 bits (105), Expect = 3e-05
Identities = 20/48 (41%), Positives = 32/48 (66%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKL 654
VGV+++ Y I LP + D V M+V+E+P YSD+GG +QI+++
Sbjct: 119 VGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGLDQQIQEM 166
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +1
Query: 601 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPS 780
PD+++ DVGG E++ + ++ PLLHPE F G+ TGKT +
Sbjct: 807 PDISWKDVGGLDSVKEEILDTIQLPLLHPELFA-AGL-RRSGVLLYGPPGTGKTLMAKAV 864
Query: 781 PTGXTPAFIRVIGSELV 831
T + F+ V G EL+
Sbjct: 865 ATECSLNFLSVKGPELI 881
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/85 (35%), Positives = 43/85 (50%)
Frame = +1
Query: 514 GVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEK 693
GV R++ +I L +DP M V+ K V + VGG +QI+ L+E++ PL++PE
Sbjct: 857 GVLRDRERIGSSLAD-VDP----MSVDRK--VKFDSVGGLNKQIQALKEMILFPLVYPEV 909
Query: 694 FVKLGIXXXXXXXXXXXXXTGKTCV 768
F K I TGKT V
Sbjct: 910 FDKFKITPPRGVLFFGPPGTGKTLV 934
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 613 YSDVGGCKEQIEKLREVVETPLLHPEKFVKLGI 711
+ DVGG + + LR+ +E PLLHPE F ++G+
Sbjct: 483 WDDVGGLEGVKQALRQAIEWPLLHPEAFARMGL 515
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 517 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 696
+D N Y + + K + + ++V D + G + I+ L+E+V+ PL +PE F
Sbjct: 181 IDNNAYVV---ITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKELVQFPLYYPESF 237
Query: 697 VKLGIXXXXXXXXXXXXXTGKTCVL 771
LGI GKT ++
Sbjct: 238 SHLGINGPKGILLVGAPGVGKTLLV 262
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 613 YSDVGGCKEQIEKLREVVETPLLHPEKFVKLGI 711
+ DVGG + + LR+ +E PLLHPE F ++G+
Sbjct: 12 WDDVGGLEGVKQALRQAIEWPLLHPEAFARMGL 44
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 35.9 bits (79), Expect = 0.041
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPT 786
V ++D+GGC +E++ +++ + HPE F LG+ GKT +LA +
Sbjct: 674 VKFADIGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTPTTGFLLHGPPGCGKT-LLAHAIA 731
Query: 787 GXTP-AFIRVIGSELV 831
G F+++ +E+V
Sbjct: 732 GELEMPFLKLAATEIV 747
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +1
Query: 517 VDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 696
+D N Y + + K + + ++V D + G + I+ L+E+V+ PL +PE F
Sbjct: 11 IDNNAYVV---ITEKTNINIESVKVGSSVDSGNIILSGLDDSIKMLKELVQFPLYYPESF 67
Query: 697 VKLGIXXXXXXXXXXXXXTGKTCVL 771
LGI GKT ++
Sbjct: 68 SHLGINGPKGILLVGAPGVGKTLLV 92
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 589 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKF 696
V EKP+V +SD+ G + E L+E V P+ P F
Sbjct: 88 VMEKPNVKWSDIAGLESAKEALKEAVILPIKFPHLF 123
>SB_23558| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 30.3 bits (65), Expect = 2.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -2
Query: 423 FGSFESALMIFVHRATCSGCSFCSVCLSAARSHKAGGANPVSDSLMPVSSLTL 265
+ SFES+ ++ +TC S C S R+ K G NP + P S+ TL
Sbjct: 555 YKSFESSALVPSRPSTCGLDSPCQTDTSICRNGKCSGGNP---NRFPTSTTTL 604
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/83 (26%), Positives = 33/83 (39%)
Frame = +1
Query: 589 VEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
+++ P+V ++D+ E + L E V PLL P+ F + TGKT +
Sbjct: 241 LQKNPNVHWADIADLHEAKKLLEEAVVLPLLMPDYFQGIR-RPWRGVLMVGPPGTGKTML 299
Query: 769 LAPSPTGXTPAFIRVIGSELVPK 837
T F V S L K
Sbjct: 300 AKAVATECGTTFFNVSSSTLTSK 322
>SB_33374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4475
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 404 ADSNDPKYIINVKQFAKFVVDLQDSVAPTDIEEGMGLVWIVINTRSTYP 550
ADS+DP Y V+ FAK +VD D ++P M N ++P
Sbjct: 2311 ADSSDPTYWPRVQSFAKNIVDYFD-ISPQGTHVAMVTYTTGANVAFSFP 2358
>SB_33564| Best HMM Match : RVT_1 (HMM E-Value=0.1)
Length = 2075
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = -3
Query: 710 IPSFTNFSGCNSGVSTTSLSFSICSLHPPTSLYVTSGFSSTCIMVTVGSI 561
IPS + S S +STTS SL PT + GFS+ + + S+
Sbjct: 795 IPSLMS-STLTSSISTTSTGMPPASLSTPTPFFTHPGFSTKPVTTSPTSL 843
>SB_2668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 28.3 bits (60), Expect = 8.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 550 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 687
L P++ + ++ P VT+ D+ G + ++E+V P+L P
Sbjct: 37 LEPRMVDLIMSEIMDHGPPVTWDDIAGLEFAKNVIKEIVVWPMLRP 82
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,849,327
Number of Sequences: 59808
Number of extensions: 469337
Number of successful extensions: 1243
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2359470773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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