Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0915
(838 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 154 6e-38
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 87 1e-17
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 87 1e-17
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 87 2e-17
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 79 4e-15
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 78 7e-15
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 77 1e-14
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 76 3e-14
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 76 3e-14
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 74 1e-13
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 54 2e-07
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 53 2e-07
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 38 0.007
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 38 0.007
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 38 0.007
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 38 0.007
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 38 0.007
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 38 0.007
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 38 0.007
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 34 0.14
AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome as... 30 2.3
AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog... 30 2.3
AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein. 30 2.3
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 26 5.0
U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine rece... 29 5.4
U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical pr... 29 5.4
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 29 5.4
U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine recept... 28 9.5
U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine recept... 28 9.5
U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine recept... 28 9.5
U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine recept... 28 9.5
U39998-5|AAK71421.2| 408|Caenorhabditis elegans Gustatory recep... 28 9.5
AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical... 28 9.5
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 28 9.5
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 154 bits (374), Expect = 6e-38
Identities = 76/109 (69%), Positives = 80/109 (73%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
VGVDRNKYQIH+PLP KIDPTVTMMQVEEKPDVTYSDVGGCK+QIEKLREVVETPLLHPE
Sbjct: 142 VGVDRNKYQIHLPLPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPE 201
Query: 691 KFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
++V LGI TGKT FIRVIGSELV K
Sbjct: 202 RYVNLGIEPPKGVLLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQK 250
Score = 122 bits (295), Expect = 2e-28
Identities = 57/83 (68%), Positives = 66/83 (79%)
Frame = +2
Query: 260 MKRVNELTGIKESDTGXXXXXXXXXXXXKQTLQNEQPLQVARCTKIINADSNDPKYIINV 439
+K+VNEL+G+KESDTG KQ +Q EQPLQVARCTKII +D +DP+Y+INV
Sbjct: 58 LKKVNELSGVKESDTGLAPPALWDIAADKQAMQQEQPLQVARCTKIITSDKHDPRYLINV 117
Query: 440 KQFAKFVVDLQDSVAPTDIEEGM 508
KQFAKFVVDL DSVAPTDIEEGM
Sbjct: 118 KQFAKFVVDLADSVAPTDIEEGM 140
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 MPDHLGNDMRXXXXXXXXXXXXXX-SLDEGDIALLKSYGQGQYTKIIKEVEEGIQ 254
MPDHLG+DMR +LDEGDIA+LK YGQG Y + +K ++ I+
Sbjct: 1 MPDHLGDDMRKTKKDDTKEEEKNFQALDEGDIAVLKRYGQGPYAEQLKTLDADIE 55
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/109 (43%), Positives = 60/109 (55%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
V + + Y IH LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HPE
Sbjct: 119 VALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPE 178
Query: 691 KFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
F LGI TGKT + FIRV GSELV K
Sbjct: 179 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 227
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 87.4 bits (207), Expect = 1e-17
Identities = 47/109 (43%), Positives = 60/109 (55%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
V + + Y IH LP K+DP V++M VE+ PD TY VGG QI++++EV+E P+ HPE
Sbjct: 140 VALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPE 199
Query: 691 KFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
F LGI TGKT + FIRV GSELV K
Sbjct: 200 LFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 248
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 86.6 bits (205), Expect = 2e-17
Identities = 46/109 (42%), Positives = 61/109 (55%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
V + + Y +H LP K+DP V++M VE+ PD TY VGG +QI++++EV+E P+ HPE
Sbjct: 124 VALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPE 183
Query: 691 KFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
F LGI TGKT + FIRV GSELV K
Sbjct: 184 LFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHTECTFIRVSGSELVQK 232
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 79.0 bits (186), Expect = 4e-15
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +1
Query: 565 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXX 744
DP V++M++E+ P TY+DVGG +QI++++E VE PL HPE + ++GI
Sbjct: 171 DPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGC 230
Query: 745 XXTGKTCVLAPSPTGXTPA-FIRVIGSELVPK 837
TGKT +LA + T A F+R++GSEL+ K
Sbjct: 231 PGTGKT-LLAKAVANQTSATFLRIVGSELIQK 261
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 78.2 bits (184), Expect = 7e-15
Identities = 39/107 (36%), Positives = 58/107 (54%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
VGV+++ Y I LP + D V M+V+E+P YSD+GGC +QI++L E V P+ H +
Sbjct: 142 VGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKD 201
Query: 691 KFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELV 831
+FV LGI TGKT + F+++ G +LV
Sbjct: 202 RFVNLGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLV 248
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 77.4 bits (182), Expect = 1e-14
Identities = 36/96 (37%), Positives = 54/96 (56%)
Frame = +1
Query: 550 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXX 729
LPP+ D ++ M++ +EKPD++Y D+GG Q +++RE VE PL H E + ++GI
Sbjct: 139 LPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGV 198
Query: 730 XXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
GKT + +FIRV+GSE V K
Sbjct: 199 LMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQK 234
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 76.2 bits (179), Expect = 3e-14
Identities = 41/109 (37%), Positives = 59/109 (54%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
V +D I LP ++DP V M E+ +++YSDVGG EQI +LREVVE PL++PE
Sbjct: 107 VSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPE 166
Query: 691 KFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
F ++GI TGKT + + F++V+ S +V K
Sbjct: 167 LFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK 215
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 76.2 bits (179), Expect = 3e-14
Identities = 41/109 (37%), Positives = 59/109 (54%)
Frame = +1
Query: 511 VGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPE 690
V +D I LP ++DP V M E+ +++YSDVGG EQI +LREVVE PL++PE
Sbjct: 115 VSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPE 174
Query: 691 KFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
F ++GI TGKT + + F++V+ S +V K
Sbjct: 175 LFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDK 223
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/96 (38%), Positives = 51/96 (53%)
Frame = +1
Query: 550 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXX 729
L KID +VE+ P T+ D+GGC+ QI++L+E VE PL HPE + ++GI
Sbjct: 161 LDDKIDSNAMGHKVEKTPKETFDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGV 220
Query: 730 XXXXXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
TGKT + + FIR GS+LV K
Sbjct: 221 ILYGEPGTGKTLLAKAVANSTSATFIRATGSDLVQK 256
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 565 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXX 744
DP + E D+ Y D+GG ++Q+ +++E+VE PL HP+ F +GI
Sbjct: 193 DPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGP 252
Query: 745 XXTGKTCVLAPSPTGXTPAFIRVI-GSELVPK 837
TGKT ++A + T +F +I G E++ K
Sbjct: 253 PGTGKT-LIARAVANETGSFFFLINGPEVMSK 283
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +1
Query: 559 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXX 738
K P+ V E P+ T+SD+GG + +L+E+V+ P+ HPEK++K G+
Sbjct: 464 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 523
Query: 739 XXXXTGKTCVLAPSPTGXTPAFIRVIGSELV 831
GKT + FI + G EL+
Sbjct: 524 GPPGCGKTLLAKAIANECQANFISIKGPELL 554
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +1
Query: 559 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXX 738
K P+ V E P+ T+SD+GG + +L+E+V+ P+ HPEK++K G+
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 522
Query: 739 XXXXTGKTCVLAPSPTGXTPAFIRVIGSELV 831
GKT + FI + G EL+
Sbjct: 523 GPPGCGKTLLAKAIANECQANFISIKGPELL 553
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 565 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXX 744
DP + E +V Y D+GG ++Q+ +++E+VE PL HP+ F +G+
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 745 XXTGKTCVLAPSPTGXTPAFIRVI-GSELVPK 837
TGKT ++A + T AF +I G E++ K
Sbjct: 252 PGTGKT-LIARAVANETGAFFFLINGPEIMSK 282
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +1
Query: 559 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXX 738
K P+ V E P+ T+SD+GG + +L+E+V+ P+ HPEK++K G+
Sbjct: 463 KSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFY 522
Query: 739 XXXXTGKTCVLAPSPTGXTPAFIRVIGSELV 831
GKT + FI + G EL+
Sbjct: 523 GPPGCGKTLLAKAIANECQANFISIKGPELL 553
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 565 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXX 744
DP + E +V Y D+GG ++Q+ +++E+VE PL HP+ F +G+
Sbjct: 192 DPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGP 251
Query: 745 XXTGKTCVLAPSPTGXTPAFIRVI-GSELVPK 837
TGKT ++A + T AF +I G E++ K
Sbjct: 252 PGTGKT-LIARAVANETGAFFFLINGPEIMSK 282
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/93 (27%), Positives = 42/93 (45%)
Frame = +1
Query: 559 KIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXX 738
+I PT + E P+V+++D+GG +E ++++ V P HPE F + GI
Sbjct: 440 RIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLY 499
Query: 739 XXXXTGKTCVLAPSPTGXTPAFIRVIGSELVPK 837
KT + + F+ V G EL K
Sbjct: 500 GPPGCSKTLIARALASEAKMNFLAVKGPELFSK 532
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
V + VGG I+ L+EVV P+L+PE F K I TGKT V
Sbjct: 388 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
V + VGG I+ L+EVV P+L+PE F K I TGKT V
Sbjct: 386 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 439
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
V + VGG I+ L+EVV P+L+PE F K I TGKT V
Sbjct: 388 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
V + VGG I+ L+EVV P+L+PE F K I TGKT V
Sbjct: 388 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
V + VGG I+ L+EVV P+L+PE F K I TGKT V
Sbjct: 386 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 439
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
V + VGG I+ L+EVV P+L+PE F K I TGKT V
Sbjct: 388 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCV 768
V + VGG I+ L+EVV P+L+PE F K I TGKT V
Sbjct: 388 VGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLV 441
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPT 786
+ + DV GC E ++RE V+ L +P +F KLG GKT +
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA 340
Query: 787 GXTPAFIRVIGSELV 831
T FI + GSE V
Sbjct: 341 ESTVPFISMNGSEFV 355
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/75 (32%), Positives = 33/75 (44%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPT 786
+ + DV GC E ++RE V+ L +P +F KLG GKT +
Sbjct: 282 IKFKDVAGCSEAKVEIREFVDY-LKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAA 340
Query: 787 GXTPAFIRVIGSELV 831
T FI + GSE V
Sbjct: 341 ESTVPFISMNGSEFV 355
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 607 VTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPSPT 786
V ++DV GC+E ++ E V L +P+++ LG TGKT + +
Sbjct: 290 VKFADVAGCEEAKIEIMEFVNF-LKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAG 348
Query: 787 GXTPAFIRVIGSELV 831
FI V GSE +
Sbjct: 349 EANVPFITVSGSEFL 363
>AF016424-2|AAB65332.1| 720|Caenorhabditis elegans Peroxisome
assembly factor protein6 protein.
Length = 720
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 601 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPS 780
P+V + DVGG +E + + E + T L + GI GKT +
Sbjct: 460 PNVRWEDVGGLEETKQTVLESIRTNLFGSRALKRSGI------ILYGSPGCGKTLIAKAV 513
Query: 781 PTGXTPAFIRVIGSELVPK 837
T AF+ V G EL+ K
Sbjct: 514 ATEFKIAFLSVKGPELLNK 532
>AB012224-1|BAA76440.1| 720|Caenorhabditis elegans Pex6p homolog
protein.
Length = 720
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 601 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPS 780
P+V + DVGG +E + + E + T L + GI GKT +
Sbjct: 460 PNVRWEDVGGLEETKQTVLESIRTNLFGSRALKRSGI------ILYGSPGCGKTLIAKAV 513
Query: 781 PTGXTPAFIRVIGSELVPK 837
T AF+ V G EL+ K
Sbjct: 514 ATEFKIAFLSVKGPELLNK 532
>AB010968-1|BAA33544.1| 720|Caenorhabditis elegans PEX6 protein.
Length = 720
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +1
Query: 601 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGIXXXXXXXXXXXXXTGKTCVLAPS 780
P+V + DVGG +E + + E + T L + GI GKT +
Sbjct: 460 PNVRWEDVGGLEETKQTVLESIRTNLFGSRALKRSGI------ILYGSPGCGKTLIAKAV 513
Query: 781 PTGXTPAFIRVIGSELVPK 837
T AF+ V G EL+ K
Sbjct: 514 ATEFKIAFLSVKGPELLNK 532
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 25.8 bits (54), Expect(2) = 5.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 728 CCYSGPPGPG 757
CC GPPGPG
Sbjct: 106 CCNPGPPGPG 115
Score = 21.4 bits (43), Expect(2) = 5.0
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 731 CYSGPPGPGRP 763
C +GPPGP P
Sbjct: 155 CPAGPPGPPGP 165
>U97008-6|AAB52307.1| 323|Caenorhabditis elegans Serpentine
receptor, class h protein275 protein.
Length = 323
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 471 CKSTTNFANCFTLIMYFGSFESALMIFVHRATCSGC--SFCS 352
C+S N CF +I G F + +M+++H C FCS
Sbjct: 268 CQSANNL--CFIIIAAHGLFSTFIMLYIHSPYREACFRIFCS 307
>U67948-4|AAM51500.1| 688|Caenorhabditis elegans Hypothetical
protein M02E1.1b protein.
Length = 688
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 553 PPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 687
PP+ +P TM+ EE+ + + G K + L +VV ++HP
Sbjct: 587 PPEEEPPETMLAEEEEQNEWQQLLMGTKYKCATLGDVVRQSVIHP 631
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical
protein M02E1.1a protein.
Length = 1077
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 553 PPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHP 687
PP+ +P TM+ EE+ + + G K + L +VV ++HP
Sbjct: 587 PPEEEPPETMLAEEEEQNEWQQLLMGTKYKCATLGDVVRQSVIHP 631
>U97549-5|AAO91739.1| 212|Caenorhabditis elegans Dopamine receptor
protein 1, isoformd protein.
Length = 212
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 537 DPHTPASENRSN 572
DPHTPA+ NRSN
Sbjct: 60 DPHTPAAHNRSN 71
>U97549-4|AAO91736.1| 460|Caenorhabditis elegans Dopamine receptor
protein 1, isoforma protein.
Length = 460
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 537 DPHTPASENRSN 572
DPHTPA+ NRSN
Sbjct: 308 DPHTPAAHNRSN 319
>U97549-3|AAO91737.1| 402|Caenorhabditis elegans Dopamine receptor
protein 1, isoformb protein.
Length = 402
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 537 DPHTPASENRSN 572
DPHTPA+ NRSN
Sbjct: 250 DPHTPAAHNRSN 261
>U97549-2|AAO91738.1| 399|Caenorhabditis elegans Dopamine receptor
protein 1, isoformc protein.
Length = 399
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +3
Query: 537 DPHTPASENRSN 572
DPHTPA+ NRSN
Sbjct: 250 DPHTPAAHNRSN 261
>U39998-5|AAK71421.2| 408|Caenorhabditis elegans Gustatory receptor
family protein 5 protein.
Length = 408
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = -2
Query: 441 FTLIM---YFGSFESALMIFVHRATCSGCSFCSVCLSAARSHK 322
FTL+M + SF L+ C+ C+FCSV ++ AR H+
Sbjct: 284 FTLMMLNQHLSSFTDFLICMPFILFCT-CAFCSVTIAPARVHE 325
>AL132949-10|CAB61082.1| 721|Caenorhabditis elegans Hypothetical
protein Y53F4B.12 protein.
Length = 721
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -2
Query: 150 PALLYHLSLCAYHSLNGQAFLIFIPTKRLI 61
PA Y LS+C+ +L+G F+P R+I
Sbjct: 304 PAAKYMLSVCSVCALSGGVLASFLPATRVI 333
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 27.9 bits (59), Expect = 9.5
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 601 PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVKLGI-XXXXXXXXXXXXXTGKTCVLAP 777
PDV++ D+G E ++L + P+ + F LGI GKT +LA
Sbjct: 528 PDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKT-LLAK 586
Query: 778 SPTGXTPA-FIRVIGSELV 831
+ T FI V G EL+
Sbjct: 587 AVANETGMNFISVKGPELL 605
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,560,951
Number of Sequences: 27780
Number of extensions: 356141
Number of successful extensions: 1283
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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