Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0914
         (833 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   3.0  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   3.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.1  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 75  PDLGDLIIERRNHKVPHDLRN 137
           PDL  L++E R  K+ HD  N
Sbjct: 221 PDLIHLLMEARKGKLKHDNSN 241


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
 Frame = +1

Query: 562 EQSTILPQT-SA*IMTLVTSLGMLINSLMXFSNGPNNNGDTSNYGFWDLRIVSPKAHIXP 738
           E +T  P + SA I       G L  S     N P  N  T   G  D    SP+  +  
Sbjct: 14  ESNTSTPVSKSAFIELQQHGYGPLRTSYQHHFNSPAGNAHTGPTGTHDAGFPSPRGALGA 73

Query: 739 LRFR*NXPLVXNFFT 783
             FR   P+  N +T
Sbjct: 74  YPFR---PMHQNSYT 85


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = +1

Query: 481 NYVSRSNKQSPLYYIVKSNNFNAANNLEQSTILPQTSA*IMTLVTSLGMLINSLM 645
           NY+   +    LY     +NFN +++      +  TS     ++  LG++ N ++
Sbjct: 35  NYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVMV 89


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 12/55 (21%), Positives = 25/55 (45%)
 Frame = +1

Query: 481 NYVSRSNKQSPLYYIVKSNNFNAANNLEQSTILPQTSA*IMTLVTSLGMLINSLM 645
           NY+   +    LY     +NFN +++      +  TS     ++  LG++ N ++
Sbjct: 35  NYLYTPSSTIDLYNTSSVSNFNESSSSVFPNYIRTTSMVFCIIIMCLGVIGNVMV 89


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 366 PKTQEPQHRILCPKLFMY 419
           PK QEPQ    CP+   Y
Sbjct: 96  PKLQEPQPSQHCPRKHGY 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,215
Number of Sequences: 336
Number of extensions: 3692
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)