Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0909
         (847 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0870 + 20431215-20431419,20432559-20433439,20433829-204339...    32   0.50 
01_06_1490 - 37732724-37735020,37735803-37735980                       29   3.5  
11_01_0170 - 1373986-1374013,1374061-1374326,1374693-1374926,137...    29   6.2  
07_03_0339 + 16941359-16941670,16941703-16942074                       29   6.2  
07_03_0794 + 21562995-21563004,21564151-21565799                       28   8.1  
02_05_0691 - 30949234-30949243,30949613-30950001,30950425-309504...    28   8.1  

>04_03_0870 +
           20431215-20431419,20432559-20433439,20433829-20433990,
           20434742-20435001,20435110-20435200,20435487-20435675
          Length = 595

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -3

Query: 320 DFVPPPDLSQNSNFEHNFLSQRNVQNSPLFRKVFYNLFFASIRKHKFWSN 171
           D VPP  +       ++F   +N  N+P++ K +Y+LF+    K   W N
Sbjct: 43  DGVPPSIVDSELRTGYHFQPPKNWINAPMYYKGWYHLFYQYNPKGAVWGN 92


>01_06_1490 - 37732724-37735020,37735803-37735980
          Length = 824

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 719 WSXPPIGPNCTRLCSPFSVCT 657
           WS P +  +   LC PFSVCT
Sbjct: 294 WSQPKVKCDVYSLCGPFSVCT 314


>11_01_0170 -
           1373986-1374013,1374061-1374326,1374693-1374926,
           1375034-1375171,1375255-1375557,1376008-1376172,
           1376469-1376933
          Length = 532

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 835 PADAPRRSKSPGLRPRCAGTGESA 764
           P   PRRS+S  + PR  G GE A
Sbjct: 30  PPPCPRRSRSASVEPRARGIGEYA 53


>07_03_0339 + 16941359-16941670,16941703-16942074
          Length = 227

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
 Frame = -1

Query: 826 APRRSKSPG----LRPRCAGTGESAHSHWMLLPSXAHLETGVXHRLVPIAPAYVPHSASA 659
           APR S+  G    L+ RC+G    A S W+  P+    +T +   +V    + V     A
Sbjct: 142 APRWSRMAGRRRWLKRRCSGACSRALSAWLAFPAMHLTQTEMAKVVVTTTGSEVEDDGEA 201

Query: 658 L-VEFGFFKNR 629
             +  GFF +R
Sbjct: 202 EDLSLGFFSSR 212


>07_03_0794 + 21562995-21563004,21564151-21565799
          Length = 552

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 22/52 (42%), Positives = 26/52 (50%)
 Frame = +1

Query: 418 GNIFKSLRELFIS*PKIHSEFVDLIYSCYSDQFPKKHQEIRIKSGLSVEFVL 573
           G + KS+ E F    KI  EF  L  S Y+ Q  K+  EIR    LSV F L
Sbjct: 342 GKMLKSMSEEF----KIPLEFTPL--SVYATQVTKEMLEIRPGEALSVNFTL 387


>02_05_0691 -
           30949234-30949243,30949613-30950001,30950425-30950449,
           30950594-30950688,30950842-30951359,30951652-30951736,
           30951842-30952633
          Length = 637

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 311 PPPDLSQNSNFEHNFLSQRNVQNSP 237
           PPPD S + N  H+  S RN + SP
Sbjct: 317 PPPDASPSVNKRHSSSSARNKKQSP 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,095,246
Number of Sequences: 37544
Number of extensions: 475547
Number of successful extensions: 1284
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)