Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0909
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   2.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   3.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   6.7  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   8.8  

>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 215 CKKLFETKDCFVHFAAIGNCVQ 280
           C K+F+ + C +   ++ NC Q
Sbjct: 637 CIKVFDLRQCHLQMQSLANCAQ 658


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -2

Query: 648  LDSSRTDHQSHAGQTDALWL*TSCMQNELDT*SRFYSYFLMFLWKLITV-ARIYK 487
            LD    ++++  G+    WL   C+++ + T       F + +W+L+T  AR Y+
Sbjct: 984  LDFDSDEYRAAGGKMPIKWLALECIRHRVFTSKSDVWAFGITIWELLTYGARPYE 1038


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +1

Query: 676 EHRRVQLGPIGGXLQSPSGLSWGAASSG 759
           EH R+     GG +   SG   GA SSG
Sbjct: 663 EHHRLAASLGGGAVGGGSGAGGGAGSSG 690


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 534 FLMFLWKLITVARIYKVDELTVNFR 460
           +L+F   L+T++ +  +  L VNFR
Sbjct: 305 YLLFTMMLVTLSVVVTIAVLNVNFR 329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 910,213
Number of Sequences: 2352
Number of extensions: 18574
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)