Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0909
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical ...    36   0.048
Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical pr...    31   0.78 
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    29   5.5  

>AC024881-9|AAK71410.1|  588|Caenorhabditis elegans Hypothetical
           protein Y97E10B.1 protein.
          Length = 588

 Score = 35.5 bits (78), Expect = 0.048
 Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
 Frame = +1

Query: 280 KLLFWLKSGGGTK--SPLGQLVRKQT-DHRTINKKATTSVIEL*NRKDFGNIFKS--LRE 444
           K +FW++    ++  S   QL+     D+ T    ++ +++ +    D   + +   LRE
Sbjct: 443 KTIFWVRIDNSSEQDSRSKQLIEPMYFDNSTAKIISSRTILSI--EDDLRRMMRKPKLRE 500

Query: 445 LFIS*PKIHSEFVDLIYSCYSDQFPKKHQEIRI 543
           +F + P IH  F DLI  CY+D++ + H   RI
Sbjct: 501 IFKNLPNIHY-FTDLIVKCYNDRYYRYHYSGRI 532


>Z68227-4|CAA92518.1|  480|Caenorhabditis elegans Hypothetical
           protein F49C12.5b protein.
          Length = 480

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +1

Query: 433 SLRELFIS*PKIHSEFVDLIYSCYSDQFPKKHQEIRI 543
           +++++F   P IH  + DL+ +CY+D++ K H   RI
Sbjct: 389 NIQKIFAQLPDIHY-YTDLVVNCYNDRYYKYHYSGRI 424


>Z68227-3|CAA92519.1|  507|Caenorhabditis elegans Hypothetical
           protein F49C12.5a protein.
          Length = 507

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +1

Query: 433 SLRELFIS*PKIHSEFVDLIYSCYSDQFPKKHQEIRI 543
           +++++F   P IH  + DL+ +CY+D++ K H   RI
Sbjct: 416 NIQKIFAQLPDIHY-YTDLVVNCYNDRYYKYHYSGRI 451


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
           protein F41G3.12 protein.
          Length = 1483

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -1

Query: 751 MLLPSXAHLETGVXHRLVPIAPAYVPHSASALVEFGFFKNRSPKSC 614
           +L PS  HL+     +  PI+     H  S+   F  FK R P +C
Sbjct: 625 VLYPSLCHLQLASCQKGAPISEMPPSHCHSSKTSFPDFKVRRPCAC 670


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,206,662
Number of Sequences: 27780
Number of extensions: 438533
Number of successful extensions: 1180
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)