Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0908
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0220 + 21644642-21647293                                         29   4.5  
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603...    29   6.0  
04_04_1650 - 35051728-35051823,35052054-35052162,35052270-350524...    28   7.9  

>09_06_0220 + 21644642-21647293
          Length = 883

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +2

Query: 599 FEPHALMLNEEAVIITGLLVGLNVVDCNLCXKEEDLDSQQG 721
           FEP   +L+  AV    L  G + VD +L  KE    SQQG
Sbjct: 217 FEPRPFLLSAVAVEAPELDFGRSAVDLSLLVKESTDKSQQG 257


>03_06_0759 -
           36059872-36059928,36059934-36060125,36060241-36060348,
           36060440-36060712,36060923-36061009,36061085-36061276,
           36061841-36061969,36062087-36062200,36062446-36062490,
           36062785-36062956,36063229-36063515,36063989-36064456
          Length = 707

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 16/49 (32%), Positives = 28/49 (57%)
 Frame = -1

Query: 190 YMFFVVAISEVLAIFHLLKMKIFRWDEI*QKT*MMLVILLHHFLLQMPY 44
           Y+ FV+ +S      H+ ++KI+  +E  Q +   +V LL HFL  +P+
Sbjct: 478 YVSFVILLSVSGVPAHIDEIKIYSHEEANQHS-STMVFLLGHFLSSIPF 525


>04_04_1650 -
           35051728-35051823,35052054-35052162,35052270-35052416,
           35052516-35052637,35052726-35052825,35052895-35053095,
           35053202-35053407,35053778-35053803,35054239-35054327,
           35054427-35054635,35055577-35055672,35055754-35055924
          Length = 523

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/71 (16%), Positives = 37/71 (52%)
 Frame = +2

Query: 530 MQKRLADYLRILLEHREDTLEEYFEPHALMLNEEAVIITGLLVGLNVVDCNLCXKEEDLD 709
           M   + DY++ L ++ + ++++ F    +   ++  +++ ++  ++ ++ NL  K +   
Sbjct: 253 MTSYVTDYIKFLFDY-QSSIKQIFGDPCVEDEKDTDVVSQIVGAIHALETNLAMKAKQYK 311

Query: 710 SQQGGHRFLLD 742
               GH FL++
Sbjct: 312 DLALGHLFLMN 322


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,458,901
Number of Sequences: 37544
Number of extensions: 414008
Number of successful extensions: 1014
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)