Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0906
         (855 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF181639-1|AAD55425.1| 1532|Drosophila melanogaster BcDNA.GH0935...    81   1e-15
AE014298-1422|AAF46565.3| 1532|Drosophila melanogaster CG2967-PA...    81   1e-15

>AF181639-1|AAD55425.1| 1532|Drosophila melanogaster BcDNA.GH09358
           protein.
          Length = 1532

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
 Frame = +1

Query: 307 RDVVLAVVKQLSS-------PDPSPLTTDAEVEWVLEVIRYGLSLPLSEHSAVRDCVRVA 465
           R+VV++VVKQL +        +PS L  D EV+W ++VI +GLSLPL EH  ++DCV V 
Sbjct: 34  REVVVSVVKQLGTNLGITQNAEPSHLVKDEEVKWCMDVICFGLSLPLQEHETIKDCVNVY 93

Query: 466 CAWLXPLLAXHSXXXXXXXXXXXXXXXXXHRYARKILRHLQXLFVPRPDESGD*SANKQS 645
           C WL  L                      + YAR+I+ H   LFVPR  ES D +  +Q+
Sbjct: 94  CEWLTAL------HPQPRISVPKPICEDANLYARQIINHFHNLFVPRQGESAD-TIKRQA 146

Query: 646 V 648
           V
Sbjct: 147 V 147


>AE014298-1422|AAF46565.3| 1532|Drosophila melanogaster CG2967-PA
           protein.
          Length = 1532

 Score = 81.4 bits (192), Expect = 1e-15
 Identities = 48/121 (39%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
 Frame = +1

Query: 307 RDVVLAVVKQLSS-------PDPSPLTTDAEVEWVLEVIRYGLSLPLSEHSAVRDCVRVA 465
           R+VV++VVKQL +        +PS L  D EV+W ++VI +GLSLPL EH  ++DCV V 
Sbjct: 34  REVVVSVVKQLGTNLGITQNAEPSHLVKDEEVKWCMDVICFGLSLPLQEHETIKDCVNVY 93

Query: 466 CAWLXPLLAXHSXXXXXXXXXXXXXXXXXHRYARKILRHLQXLFVPRPDESGD*SANKQS 645
           C WL  L                      + YAR+I+ H   LFVPR  ES D +  +Q+
Sbjct: 94  CEWLTAL------HPQPRISVPKPICEDANLYARQIINHFHNLFVPRQGESAD-TIKRQA 146

Query: 646 V 648
           V
Sbjct: 147 V 147


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,313,092
Number of Sequences: 53049
Number of extensions: 564274
Number of successful extensions: 1215
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)