Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0905
         (827 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22CY7 Cluster: Putative uncharacterized protein; n=1; ...    36   1.2  
UniRef50_Q4Z5J9 Cluster: Putative uncharacterized protein; n=3; ...    36   1.6  
UniRef50_Q6BU16 Cluster: Similar to CA5271|IPF1777 Candida albic...    35   2.2  
UniRef50_A3DLC0 Cluster: CRISPR-associated protein Cas4; n=1; St...    35   2.9  
UniRef50_A4VG49 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  
UniRef50_Q7R9C1 Cluster: Putative uncharacterized protein PY0694...    33   6.6  
UniRef50_Q55D93 Cluster: Putative uncharacterized protein; n=1; ...    33   6.6  

>UniRef50_Q22CY7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 408

 Score = 35.9 bits (79), Expect = 1.2
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +2

Query: 650 NTVQPSLKLPISQKKLGVRGL*LHVDFL*TR*KVVHKKLVTLHSNF 787
           NTV    KLP  QK LG+ GL + + F  +  K++H+ L+ +H NF
Sbjct: 282 NTVNLGCKLP--QKMLGLIGLFIRIFFYHSPIKIIHQILLNIHKNF 325


>UniRef50_Q4Z5J9 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 504

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = -2

Query: 547 YN*INYLKM*L*T*FIYKSFYFESCFYKTRRSQNGS*VFTEVNYFGSMLLAIPCLCTILS 368
           YN IN   + +    IY SFYF  C   ++  +  + V  ++NYF   L   PC C  LS
Sbjct: 419 YNCINLKDVEISLADIY-SFYFSQCTKGSKNEKIKNEVTNQINYFDKRLYTKPCKCMFLS 477


>UniRef50_Q6BU16 Cluster: Similar to CA5271|IPF1777 Candida
           albicans; n=1; Debaryomyces hansenii|Rep: Similar to
           CA5271|IPF1777 Candida albicans - Debaryomyces hansenii
           (Yeast) (Torulaspora hansenii)
          Length = 658

 Score = 35.1 bits (77), Expect = 2.2
 Identities = 19/57 (33%), Positives = 32/57 (56%)
 Frame = +2

Query: 137 GLSSFVSDLSLGLYNNKYIVY*ILPVKVPANCKFMYVTAMTECIAVN*SHKIECCML 307
           GL+ F+ +L   L N  +++  IL    P NC+F+Y + + +   V  +HK  CC+L
Sbjct: 249 GLNPFIIELIKDL-NGNHVIQKILNKYSPENCQFIYDSIINDLYVVA-THKHGCCVL 303


>UniRef50_A3DLC0 Cluster: CRISPR-associated protein Cas4; n=1;
           Staphylothermus marinus F1|Rep: CRISPR-associated
           protein Cas4 - Staphylothermus marinus (strain ATCC
           43588 / DSM 3639 / F1)
          Length = 187

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 413 WQY-VTGYTMLMYDTIFVP*INGSYLRPLKKTTIRKTAYNTQSYVISSL 270
           W+Y +T Y +L+ +T + P  N   + P  KTTI     N ++Y+I +L
Sbjct: 102 WKYTLTTYALLVEETYYKPVKNAILIMPGPKTTIINITSNDRNYIIKTL 150


>UniRef50_A4VG49 Cluster: Putative uncharacterized protein; n=1;
           Pseudomonas stutzeri A1501|Rep: Putative uncharacterized
           protein - Pseudomonas stutzeri (strain A1501)
          Length = 86

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = -2

Query: 427 EVNYFGSMLLAIPCLCTILSSYRR 356
           EV Y G++LL + C+C ++++YRR
Sbjct: 7   EVLYLGALLLLVDCICCLIAAYRR 30


>UniRef50_Q7R9C1 Cluster: Putative uncharacterized protein PY06941;
           n=2; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY06941 - Plasmodium yoelii yoelii
          Length = 654

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = -2

Query: 547 YN*INYLKM*L*T*FIYKSFYFESCFYKTRRSQNGS*VFTEVNYFGSMLLAIPCLCTILS 368
           YN IN  ++ +    IY SFYF  C   ++  +  + +  +VNYF   L   PC C  LS
Sbjct: 106 YNCINLKEVEISLADIY-SFYFSQCTKGSKIEKIKNELGKQVNYFDKRLYTKPCKCMFLS 164


>UniRef50_Q55D93 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 1317

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
 Frame = -3

Query: 696 SFFCEIGNFKEGCTVFTKQSVTK-----NGKGMFKWLSNNAYEI-QCAIFNC*LKF---- 547
           SF   + NF   C V  K S+ K     NG G    + N+  +I  C I NC   F    
Sbjct: 482 SFKNNLFNFNNNCNVIIKSSIFKTSNYPNGDGFLFSIDNSIVDIGNCTINNCESPFLQSK 541

Query: 546 ITELIT*RCNYKPSLSI 496
           ++ L    CN+  S+SI
Sbjct: 542 LSNLTINSCNFTKSISI 558


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,813,849
Number of Sequences: 1657284
Number of extensions: 15483331
Number of successful extensions: 28737
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28732
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)