Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0905
         (827 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR533513-1|CAG38544.1|  362|Homo sapiens RNF32 protein.                30   8.9  
AF441222-1|AAM18664.1|  362|Homo sapiens ring finger protein RNF...    30   8.9  

>CR533513-1|CAG38544.1|  362|Homo sapiens RNF32 protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = -3

Query: 492 PFISKAVFIKRVVHRTDRKFSLR*ITLAVCYWLYHAYVRYYLRTVDKRFVPTSSEKD--- 322
           P   K  +  RV+H   R F ++ +T    YW     VR + R + K   PT ++     
Sbjct: 166 PLCRKNQYQTRVIHDGARLFRIKCVTRIQAYW-RGCVVRKWYRNLRKTVPPTDAKLRKKF 224

Query: 321 -NDT*NSIQHSILCDQFTAMHSVMA 250
                  I H ILC   T +  + A
Sbjct: 225 FEKKFTEISHRILCSYNTNIEELFA 249


>AF441222-1|AAM18664.1|  362|Homo sapiens ring finger protein RNF32
           protein.
          Length = 362

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
 Frame = -3

Query: 492 PFISKAVFIKRVVHRTDRKFSLR*ITLAVCYWLYHAYVRYYLRTVDKRFVPTSSEKD--- 322
           P   K  +  RV+H   R F ++ +T    YW     VR + R + K   PT ++     
Sbjct: 166 PLCRKNQYQTRVIHDGARLFRIKCVTRIQAYW-RGCVVRKWYRNLRKTVPPTDAKLRKKF 224

Query: 321 -NDT*NSIQHSILCDQFTAMHSVMA 250
                  I H ILC   T +  + A
Sbjct: 225 FEKKFTEISHRILCSYNTNIEELFA 249


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,237,141
Number of Sequences: 237096
Number of extensions: 2276718
Number of successful extensions: 3285
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3285
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10370898348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)