Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0904
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 100 3e-21
AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical ... 31 1.0
U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z35663-14|CAA84733.1| 805|Caenorhabditis elegans Hypothetical p... 29 3.2
Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical ... 29 4.2
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.3
Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical pr... 28 9.6
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 99.5 bits (237), Expect = 3e-21
Identities = 61/163 (37%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Frame = +1
Query: 262 VQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWC 441
+Q+ I PT V EQ+ AI +V +I+ A G N+I QE W MPFAFCTRE+ PW
Sbjct: 79 IQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAFCTRERLPWT 138
Query: 442 EFAESAEDGPTTTFLRELAIKYE-W*SCPRY*KGTRSIRTYFGTLRL*LVTPET*SGNIA 618
EFAES GPTT FL +LA+K++ P + + T + T G
Sbjct: 139 EFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVISHTGRV-IGRSR 197
Query: 619 RTTFRESAILTNPTTTWKVTXGHPVFATRYXKIRGEHSASGRH 747
+ T + T GHPVF T+Y +I G + GRH
Sbjct: 198 KNHIPRVGDFNESTYYMESTLGHPVFETKYGRI-GINICYGRH 239
Score = 95.9 bits (228), Expect = 3e-20
Identities = 42/58 (72%), Positives = 48/58 (82%)
Frame = +3
Query: 510 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNXG 683
+VI+S ILERDE+ D++WNTAVVIS TG VIG+ RKNHIPRVGDFNES YYME G
Sbjct: 162 IVIISPILERDEEKDDVIWNTAVVISHTGRVIGRSRKNHIPRVGDFNESTYYMESTLG 219
>AF098986-5|AAC67426.1| 671|Caenorhabditis elegans Hypothetical
protein C36C9.4 protein.
Length = 671
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 477 DLPSGTRHQVRMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 617
DLP+G + +++ I+E E + LWN + ++SD + GK R
Sbjct: 211 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHTGKVR 259
>U41275-2|AAA82465.1| 438|Caenorhabditis elegans Hypothetical
protein T25D1.2 protein.
Length = 438
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = +3
Query: 477 DLPSGTRHQVRMVIVSSILERDEKHSDILWNTAV--VISDTGNVIGKHR 617
DLP+G + +++ I+E E + LWN + ++SD + GK R
Sbjct: 283 DLPTGLMQKSTNIVLGGIVECSENPTTTLWNALIPFILSDVESHSGKVR 331
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = -1
Query: 616 RCFPITFPVSLITTAVFQSMSECFSSLSNIEDT-ITIRT*WRVPEGRSWSARLQLIR 449
+C P+TF ++ T + F+++ IE+T I I T + EG A+ +IR
Sbjct: 75 KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLLAKRTIIR 131
>Z35663-14|CAA84733.1| 805|Caenorhabditis elegans Hypothetical
protein T04A8.16 protein.
Length = 805
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 165 SLQLRRLTSTSPHTLSRPRTSRPDPREL*RRNSSAFHRG 281
++ L LT P + TS+ DP E+ R+ FHRG
Sbjct: 399 NIDLNALTGWIPERIELSDTSKADPDEVFRKLFDRFHRG 437
>Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical
protein C34E7.3 protein.
Length = 256
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = -3
Query: 491 SRRKVVVGPSSADSANSHHGCFSLVQNAKGMFHNSWKQMMLTPSWPATS 345
SR K+ +S+ + HG + +V+ AK F + +++ +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245
>AF038612-1|AAB92043.1| 348|Caenorhabditis elegans Hypothetical
protein F13B6.1 protein.
Length = 348
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 665 VVVGFVKIADSRNVVLAMFPDHVSGVTNYNR 573
V+ GFV + DS+++V D + G+TNY++
Sbjct: 156 VLNGFVGLPDSKDMVQFFDSDSIEGLTNYDQ 186
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 313 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 447
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 313 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 447
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical
protein F29A7.1 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 564 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 668
WN + + D ++ + H+ R GD+ NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300
>Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical
protein K02A11.1b protein.
Length = 480
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 340 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 495
I+ + Q G N++ NMP+ C E+ +E A G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189
>Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical
protein K02A11.1a protein.
Length = 476
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 340 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLREL 495
I+ + Q G N++ NMP+ C E+ +E A G T +++ E+
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEM 189
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,721,589
Number of Sequences: 27780
Number of extensions: 425842
Number of successful extensions: 1251
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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