Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0904
         (850 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g64370.1 68418.m08086 beta-ureidopropionase, putative / beta-...   112   3e-25
At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protei...    33   0.18 
At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protei...    33   0.18 
At2g27450.2 68415.m03318 carbon-nitrogen hydrolase family protei...    31   0.73 
At2g27450.1 68415.m03317 carbon-nitrogen hydrolase family protei...    31   0.73 
At5g16340.1 68418.m01910 AMP-binding protein, putative similar t...    30   2.2  
At5g16370.1 68418.m01913 AMP-binding protein, putative similar t...    29   3.0  
At5g13340.1 68418.m01535 expressed protein                             29   3.0  
At1g28610.2 68414.m03523 GDSL-motif lipase, putative similar to ...    29   5.2  
At1g28610.1 68414.m03524 GDSL-motif lipase, putative similar to ...    29   5.2  
At2g41790.1 68415.m05165 peptidase M16 family protein / insulina...    28   6.8  
At5g40740.1 68418.m04944 expressed protein                             28   9.0  
At5g24680.1 68418.m02917 expressed protein similar to unknown pr...    28   9.0  

>At5g64370.1 68418.m08086 beta-ureidopropionase, putative /
           beta-alanine synthase, putative similar to beta-alanine
           synthase [Dictyostelium discoideum] GI:14334061;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 408

 Score =  112 bits (269), Expect = 3e-25
 Identities = 51/84 (60%), Positives = 65/84 (77%)
 Frame = +1

Query: 256 GIVQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQP 435
           G++Q+SIA+PT  P ++Q + IF+K+K IID AG  GVNI+C QE W MPFAFCTRE++ 
Sbjct: 93  GLIQNSIALPTTAPFSDQTRGIFDKLKPIIDAAGVAGVNILCLQEAWTMPFAFCTRERR- 151

Query: 436 WCEFAESAEDGPTTTFLRELAIKY 507
           WCEFAE   DG +T FL+ELA KY
Sbjct: 152 WCEFAEPV-DGESTKFLQELAKKY 174



 Score =  103 bits (246), Expect = 2e-22
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = +3

Query: 510 MVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNXG 683
           MVIVS ILERD  H ++LWNTAV+I + GN+IGKHRKNHIPRVGDFNES YYMEG+ G
Sbjct: 176 MVIVSPILERDIDHGEVLWNTAVIIGNNGNIIGKHRKNHIPRVGDFNESTYYMEGDTG 233


>At5g12040.2 68418.m01407 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 294

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 298 VNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQP-WCEFAESAED-GP 471
           V   KK   +  KK I+ A  +G  ++   E+WN P+   + +  P + E  ++  D  P
Sbjct: 97  VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPY---SNDSFPVYAEEIDAGGDASP 153

Query: 472 TTTFLRELA 498
           +T  L E++
Sbjct: 154 STAMLSEVS 162



 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 543 EKHSDILWNTAVVISDTGNVIGKHRKNHI 629
           E+  D L+NT  V    G +  KHRK H+
Sbjct: 176 ERVGDRLYNTCCVFGSDGELKAKHRKIHL 204


>At5g12040.1 68418.m01408 carbon-nitrogen hydrolase family protein
           similar to Nit protein 2 [Homo sapiens] GI:9367116;
           contains Pfam profile PF00795: hydrolase,
           carbon-nitrogen family
          Length = 369

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 298 VNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQP-WCEFAESAED-GP 471
           V   KK   +  KK I+ A  +G  ++   E+WN P+   + +  P + E  ++  D  P
Sbjct: 97  VTSDKKRNISHAKKAIEEAASKGAKLVLLPEIWNSPY---SNDSFPVYAEEIDAGGDASP 153

Query: 472 TTTFLRELA 498
           +T  L E++
Sbjct: 154 STAMLSEVS 162



 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 543 EKHSDILWNTAVVISDTGNVIGKHRKNHI 629
           E+  D L+NT  V    G +  KHRK H+
Sbjct: 176 ERVGDRLYNTCCVFGSDGELKAKHRKIHL 204


>At2g27450.2 68415.m03318 carbon-nitrogen hydrolase family protein
           low similarity to beta-alanine synthase [Drosophila
           melanogaster] GI:14334063; contains Pfam profile
           PF00795: hydrolase, carbon-nitrogen family
          Length = 326

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 564 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNXG 683
           +N+  +I   G  +G +RK+HIP    + E  Y+  G+ G
Sbjct: 131 YNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTG 170


>At2g27450.1 68415.m03317 carbon-nitrogen hydrolase family protein
           low similarity to beta-alanine synthase [Drosophila
           melanogaster] GI:14334063; contains Pfam profile
           PF00795: hydrolase, carbon-nitrogen family
          Length = 299

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 564 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNXG 683
           +N+  +I   G  +G +RK+HIP    + E  Y+  G+ G
Sbjct: 104 YNSIAIIDADGTDLGIYRKSHIPDGPGYQEKFYFNPGDTG 143


>At5g16340.1 68418.m01910 AMP-binding protein, putative similar to
           AMP-binding protein GI:1903034 from [Brassica napus];
           contains Pfam AMP-binding domain PF00501; identical to
           adenosine monophosphate binding protein 6 AMPBP6
           (AMPBP6) GI:20799720
          Length = 550

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -3

Query: 752 RWCRPEAECSPRILXYLVANTGWPXVTFHVVVG-FVKIADS 633
           +W RPE+E  P +L Y    T  P    H   G FV   DS
Sbjct: 177 KWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSVDS 217


>At5g16370.1 68418.m01913 AMP-binding protein, putative similar to
           AMP-binding protein GI:1903034 from [Brassica napus];
           contains Pfam AMP-binding domain PF00501; identical to
           cDNA adenosine monophosphate binding protein 5 AMPBP5
           (AMPBP5) GI:20799718
          Length = 552

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -3

Query: 752 RWCRPEAECSPRILXYLVANTGWPXVTFHVVVG-FVKIADS 633
           +W RPE+E  P +L Y    T  P    H   G FV   DS
Sbjct: 177 KWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIFVMSIDS 217


>At5g13340.1 68418.m01535 expressed protein
          Length = 242

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 165 SLQLRRLTSTSPHTLSRPRTSRPDPREL*RRNSSAFHRGAHRSSSQRAKE 314
           S + RR  S SP+T    ++  P PR+  R  SS+     HR + +  KE
Sbjct: 27  SRRTRRDRSRSPYTSRHKKSRSPAPRQHQRDRSSSLSPSEHRIAIEVKKE 76


>At1g28610.2 68414.m03523 GDSL-motif lipase, putative similar to
           lipase [Arabidopsis thaliana] GI:1145627; contains Pfam
           profile: PF00657 Lipase/Acylhydrolase with GDSL-like
           motif
          Length = 383

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 582 ISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNXGPSC 692
           I+DTGN++G   +NH+P          +     G SC
Sbjct: 39  ITDTGNLVGLSDRNHLPVTAFLPYGETFFHHPTGRSC 75


>At1g28610.1 68414.m03524 GDSL-motif lipase, putative similar to
           lipase [Arabidopsis thaliana] GI:1145627; contains Pfam
           profile: PF00657 Lipase/Acylhydrolase with GDSL-like
           motif
          Length = 250

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 582 ISDTGNVIGKHRKNHIPRVGDFNESNYYMEGNXGPSC 692
           I+DTGN++G   +NH+P          +     G SC
Sbjct: 39  ITDTGNLVGLSDRNHLPVTAFLPYGETFFHHPTGRSC 75


>At2g41790.1 68415.m05165 peptidase M16 family protein / insulinase
           family protein contains Pfam domain, PF05193: Peptidase
           M16 inactive domain; similar to insulin-degrading enzyme
           (Insulysin, Insulinase, Insulin protease) [Mouse]
           SWISS-PROT:Q9JHR7
          Length = 970

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -3

Query: 836 FFPXNRSLNGXENQSPAPVXVRTSTSSRRWCRPE 735
           F P + SL   +++   PV +R +  SR W +P+
Sbjct: 491 FIPTDLSLKDADDKETVPVLLRKTPFSRLWYKPD 524


>At5g40740.1 68418.m04944 expressed protein
          Length = 741

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 534 ERDEKHSDILWNTAVVISDTGNVIGKHRKNHIPRVGDFNESN 659
           ER+ +    ++   +++    NVIG    N  PRVG F  SN
Sbjct: 8   ERELELESAMYTNCLLLGLDPNVIGLGASNGTPRVGLFRHSN 49


>At5g24680.1 68418.m02917 expressed protein similar to unknown
           protein (pir||T38384)
          Length = 399

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -3

Query: 518 DHHSYLMASSRRKVVVGPSSADSANSHHGCFSLVQ-NAKGMFHN 390
           DHH  L  +S       PSS+ SA+S +   SLVQ   K  F++
Sbjct: 37  DHHLALQLASDDHSSDDPSSSSSASSSNNVASLVQLQTKSQFYS 80


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,817,142
Number of Sequences: 28952
Number of extensions: 404496
Number of successful extensions: 1214
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)