Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0902
         (821 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089595-1|AAL90333.1|  321|Drosophila melanogaster RE18955p pro...   135   8e-32
AF073994-3|AAC27622.1|  321|Drosophila melanogaster thymidylate ...   135   8e-32
AE014134-521|AAF51176.1|  321|Drosophila melanogaster CG3181-PA ...   135   8e-32
BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p pro...    32   1.1  
BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p pro...    32   1.1  
AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA...    32   1.1  
AE013599-3664|AAF47046.2| 1324|Drosophila melanogaster CG30183-P...    32   1.1  
BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p pro...    30   3.3  
AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.       30   3.3  
AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.       30   3.3  
AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.       30   3.3  
AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.       30   3.3  
AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB...    30   3.3  
AY119216-1|AAM51076.1|  519|Drosophila melanogaster SD16006p pro...    29   7.7  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    29   7.7  
AE013599-2501|AAF57840.2|  519|Drosophila melanogaster CG18631-P...    29   7.7  

>AY089595-1|AAL90333.1|  321|Drosophila melanogaster RE18955p
           protein.
          Length = 321

 Score =  135 bits (326), Expect = 8e-32
 Identities = 59/85 (69%), Positives = 73/85 (85%), Gaps = 2/85 (2%)
 Frame = +1

Query: 259 GAKYIDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFY 438
           GA+Y  C  DY+G+GIDQL+ VID+I+NNP+DRR+++ AWN  D+ KMALPPCHCLAQFY
Sbjct: 149 GAQYGTCDDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFY 208

Query: 439 VAD--GKLSCLLYQRSADMGLGVPF 507
           V++  G+LSC LYQRSADMGLGVPF
Sbjct: 209 VSEKRGELSCQLYQRSADMGLGVPF 233



 Score =  133 bits (321), Expect = 3e-31
 Identities = 57/91 (62%), Positives = 72/91 (79%)
 Frame = +3

Query: 489 GLRSSIYIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLKIQLQREPKQFPTL 668
           GL     IASY+LLTHMIAHVTG + G+F+HT GDTHVYLNH+EPLK QL+R P+ FP L
Sbjct: 228 GLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLERTPRPFPKL 287

Query: 669 EFARKIESIDDFKYEDFIIKDYKPHPKIEME 761
              R+++ I+DF++EDF I DY PHPKI+M+
Sbjct: 288 IIKRQVQDIEDFRFEDFQIVDYNPHPKIQMD 318



 Score =  123 bits (297), Expect = 3e-28
 Identities = 54/84 (64%), Positives = 63/84 (75%)
 Frame = +2

Query: 2   IFGAMQRYSLHNNTLPLLTTKRVFTRGVIEELLWMISGSTDSKALAAKGVHIWDANGSRN 181
           +FG+  R+ + N+  PLLTTKRVF R V EELLW ++G TD+K L AK VHIWD N SR 
Sbjct: 64  VFGSQMRFDMRNS-FPLLTTKRVFFRAVAEELLWFVAGKTDAKLLQAKNVHIWDGNSSRE 122

Query: 182 FLDNLGFTDREEGDLGPVYGFQWR 253
           FLD +GFT R  GDLGPVYGFQWR
Sbjct: 123 FLDKMGFTGRAVGDLGPVYGFQWR 146


>AF073994-3|AAC27622.1|  321|Drosophila melanogaster thymidylate
           synthase protein.
          Length = 321

 Score =  135 bits (326), Expect = 8e-32
 Identities = 59/85 (69%), Positives = 73/85 (85%), Gaps = 2/85 (2%)
 Frame = +1

Query: 259 GAKYIDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFY 438
           GA+Y  C  DY+G+GIDQL+ VID+I+NNP+DRR+++ AWN  D+ KMALPPCHCLAQFY
Sbjct: 149 GAQYGTCDDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDMPKMALPPCHCLAQFY 208

Query: 439 VAD--GKLSCLLYQRSADMGLGVPF 507
           V++  G+LSC LYQRSADMGLGVPF
Sbjct: 209 VSEKRGELSCQLYQRSADMGLGVPF 233



 Score =  133 bits (321), Expect = 3e-31
 Identities = 57/91 (62%), Positives = 72/91 (79%)
 Frame = +3

Query: 489 GLRSSIYIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLKIQLQREPKQFPTL 668
           GL     IASY+LLTHMIAHVTG + G+F+HT GDTHVYLNH+EPLK QL+R P+ FP L
Sbjct: 228 GLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLERTPRPFPKL 287

Query: 669 EFARKIESIDDFKYEDFIIKDYKPHPKIEME 761
              R+++ I+DF++EDF I DY PHPKI+M+
Sbjct: 288 IIKRQVQDIEDFRFEDFQIVDYNPHPKIQMD 318



 Score =  123 bits (297), Expect = 3e-28
 Identities = 54/84 (64%), Positives = 63/84 (75%)
 Frame = +2

Query: 2   IFGAMQRYSLHNNTLPLLTTKRVFTRGVIEELLWMISGSTDSKALAAKGVHIWDANGSRN 181
           +FG+  R+ + N+  PLLTTKRVF R V EELLW ++G TD+K L AK VHIWD N SR 
Sbjct: 64  VFGSQMRFDMRNS-FPLLTTKRVFFRAVAEELLWFVAGKTDAKLLQAKNVHIWDGNSSRE 122

Query: 182 FLDNLGFTDREEGDLGPVYGFQWR 253
           FLD +GFT R  GDLGPVYGFQWR
Sbjct: 123 FLDKMGFTGRAVGDLGPVYGFQWR 146


>AE014134-521|AAF51176.1|  321|Drosophila melanogaster CG3181-PA
           protein.
          Length = 321

 Score =  135 bits (326), Expect = 8e-32
 Identities = 59/85 (69%), Positives = 73/85 (85%), Gaps = 2/85 (2%)
 Frame = +1

Query: 259 GAKYIDCQTDYTGQGIDQLQSVIDSIKNNPADRRMLICAWNSSDLKKMALPPCHCLAQFY 438
           GA+Y  C  DY+G+GIDQL+ VID+I+NNP+DRR+++ AWN  D+ KMALPPCHCLAQFY
Sbjct: 149 GAQYGTCDDDYSGKGIDQLRQVIDTIRNNPSDRRIIMSAWNPLDIPKMALPPCHCLAQFY 208

Query: 439 VAD--GKLSCLLYQRSADMGLGVPF 507
           V++  G+LSC LYQRSADMGLGVPF
Sbjct: 209 VSEKRGELSCQLYQRSADMGLGVPF 233



 Score =  133 bits (321), Expect = 3e-31
 Identities = 57/91 (62%), Positives = 72/91 (79%)
 Frame = +3

Query: 489 GLRSSIYIASYSLLTHMIAHVTGYQAGEFIHTTGDTHVYLNHIEPLKIQLQREPKQFPTL 668
           GL     IASY+LLTHMIAHVTG + G+F+HT GDTHVYLNH+EPLK QL+R P+ FP L
Sbjct: 228 GLGVPFNIASYALLTHMIAHVTGLKPGDFVHTMGDTHVYLNHVEPLKEQLERTPRPFPKL 287

Query: 669 EFARKIESIDDFKYEDFIIKDYKPHPKIEME 761
              R+++ I+DF++EDF I DY PHPKI+M+
Sbjct: 288 IIKRQVQDIEDFRFEDFQIVDYNPHPKIQMD 318



 Score =  123 bits (297), Expect = 3e-28
 Identities = 54/84 (64%), Positives = 63/84 (75%)
 Frame = +2

Query: 2   IFGAMQRYSLHNNTLPLLTTKRVFTRGVIEELLWMISGSTDSKALAAKGVHIWDANGSRN 181
           +FG+  R+ + N+  PLLTTKRVF R V EELLW ++G TD+K L AK VHIWD N SR 
Sbjct: 64  VFGSQMRFDMRNS-FPLLTTKRVFFRAVAEELLWFVAGKTDAKLLQAKNVHIWDGNSSRE 122

Query: 182 FLDNLGFTDREEGDLGPVYGFQWR 253
           FLD +GFT R  GDLGPVYGFQWR
Sbjct: 123 FLDKMGFTGRAVGDLGPVYGFQWR 146


>BT015261-1|AAT94490.1| 1411|Drosophila melanogaster LD39963p
           protein.
          Length = 1411

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 706 NMRTSLLKITNHILKLKWKGSIVYLVP 786
           N+R SLL++  +I K+ W GS +Y+ P
Sbjct: 805 NLRQSLLQLVGYINKMLWPGSPIYVFP 831


>BT003642-1|AAO39646.1| 1324|Drosophila melanogaster AT15782p
           protein.
          Length = 1324

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 150 TPLAANAFESVDPEIIHSSSSITPLVNT 67
           TP  A A ++VDP ++H+SSS+  L+ T
Sbjct: 857 TPQQAQASQAVDPTVLHNSSSLGELMQT 884


>AE014134-2036|AAF53075.1| 1411|Drosophila melanogaster CG4738-PA
           protein.
          Length = 1411

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 706 NMRTSLLKITNHILKLKWKGSIVYLVP 786
           N+R SLL++  +I K+ W GS +Y+ P
Sbjct: 805 NLRQSLLQLVGYINKMLWPGSPIYVFP 831


>AE013599-3664|AAF47046.2| 1324|Drosophila melanogaster CG30183-PA
           protein.
          Length = 1324

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -3

Query: 150 TPLAANAFESVDPEIIHSSSSITPLVNT 67
           TP  A A ++VDP ++H+SSS+  L+ T
Sbjct: 857 TPQQAQASQAVDPTVLHNSSSLGELMQT 884


>BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p
           protein.
          Length = 1105

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 381 IPCTYQHSSVCWIVLNRIYYTLQLV 307
           + C+++H  V W+VL   Y+ LQ V
Sbjct: 167 VMCSHEHCEVTWLVLRAFYHELQAV 191


>AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 381 IPCTYQHSSVCWIVLNRIYYTLQLV 307
           + C+++H  V W+VL   Y+ LQ V
Sbjct: 363 VMCSHEHCEVTWLVLRAFYHELQAV 387


>AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 381 IPCTYQHSSVCWIVLNRIYYTLQLV 307
           + C+++H  V W+VL   Y+ LQ V
Sbjct: 363 VMCSHEHCKVTWLVLRAFYHELQAV 387


>AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 381 IPCTYQHSSVCWIVLNRIYYTLQLV 307
           + C+++H  V W+VL   Y+ LQ V
Sbjct: 363 VMCSHEHCEVTWLVLRAFYHELQAV 387


>AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 381 IPCTYQHSSVCWIVLNRIYYTLQLV 307
           + C+++H  V W+VL   Y+ LQ V
Sbjct: 363 VMCSHEHCEVTWLVLRAFYHELQAV 387


>AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB
           protein.
          Length = 1413

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 381 IPCTYQHSSVCWIVLNRIYYTLQLV 307
           + C+++H  V W+VL   Y+ LQ V
Sbjct: 363 VMCSHEHCEVTWLVLRAFYHELQAV 387


>AY119216-1|AAM51076.1|  519|Drosophila melanogaster SD16006p
           protein.
          Length = 519

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 434 NCAKQ*HGGSAIFLRSEEFHAHINILLSAGLFLIESITL 318
           +C    H  S  F  +   HAH N +LS  LFL+  + L
Sbjct: 479 SCIHYNHDASVEFCVAVHLHAHANDVLSVWLFLLSMVPL 517


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +1

Query: 268   YIDCQTDYTGQGIDQLQSVIDSIKN-NPADR-RMLICAWNSSDLKKMALPPCHCLAQFY 438
             +  C+  YTG  I Q   +I+  ++  P D  +   C  NS   +    P C CL+ F+
Sbjct: 15909 FCSCRPGYTGNPIVQCHMIIEPQRDITPKDPCQPSPCGPNSECRRVGETPSCSCLSNFF 15967


>AE013599-2501|AAF57840.2|  519|Drosophila melanogaster CG18631-PA
           protein.
          Length = 519

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -1

Query: 434 NCAKQ*HGGSAIFLRSEEFHAHINILLSAGLFLIESITL 318
           +C    H  S  F  +   HAH N +LS  LFL+  + L
Sbjct: 479 SCIHYNHDASVEFCVAVHLHAHANDVLSVWLFLLSMVPL 517


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,065,432
Number of Sequences: 53049
Number of extensions: 778571
Number of successful extensions: 2288
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2285
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)