Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0901
         (742 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   2.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   2.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    23   2.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   2.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    23   2.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   2.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   2.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   2.6  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   4.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   4.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.9  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +2

Query: 71  NYHYYWEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHN 247
           ++H    +K+  +T+G  +L+  G + V I    F FT+ + Q  E Y +S    +  N
Sbjct: 509 HHHLSKLVKLFNETFGIVLLLMFGVSFVVIVITIFFFTANV-QAGELYFMSLLNPILSN 566


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +2

Query: 71  NYHYYWEIKMLTDTYGTDILIGVGSNKVNISDPQFTFTSLIGQDEESYGLSYTGAVRHN 247
           ++H    +K+  +T+G  +L+  G + V I    F FT+ + Q  E Y +S    +  N
Sbjct: 234 HHHLSKLVKLFNETFGIVLLLMFGVSFVVIVITIFFFTANV-QAGELYFMSLLNPILSN 291


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 158 ATSTTSQNLSSPASSTSSTSSTEK 181


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 158 ATSTASQNLSSPASSTSSTSSTEK 181


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 158 ATSTASQNLSSPASSTSSTSSTEK 181


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 158 ATSTASQNLSSPASSTSSTSSTEK 181


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 158 ATSTASQNLSSPASSTSSTSSTEK 181


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 114 ATSTASQNLSSPASSTSSTSSTEK 137


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 158 ATSTASQNLSSPASSTSSTSSTEK 181


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +2

Query: 254 APETRSASVAAPSSESGSTCGTER 325
           A  T S ++++P+S + ST  TE+
Sbjct: 158 ATSTASQNLSSPASSTSSTSSTEK 181


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 209 SYGLSYTGAVRHNSKAPETRSASVAAPSSE 298
           S  LSY G V  + ++P T      AP+S+
Sbjct: 76  SSSLSYGGPVNDDVRSPGTPGPLSQAPASQ 105


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 209 SYGLSYTGAVRHNSKAPETRSASVAAPSSE 298
           S  LSY G V  + ++P T      AP+S+
Sbjct: 232 SSSLSYGGPVNDDVRSPGTPGPLSQAPASQ 261


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 570 WLTLPTEGCFVDDTDVDIELEA 635
           W+  PT+  F   +D  +E +A
Sbjct: 701 WILEPTDKAFAQGSDAAVECKA 722


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,303
Number of Sequences: 336
Number of extensions: 3596
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)