Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0899
         (693 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4336 Cluster: PREDICTED: hypothetical protein;...    33   5.0  
UniRef50_Q559C2 Cluster: Putative uncharacterized protein; n=2; ...    33   6.6  

>UniRef50_UPI00015B4336 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 589

 Score = 33.5 bits (73), Expect = 5.0
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = -2

Query: 149 HLSTVIYEYIKTLKAYNNLLVEILSRYLFVTNL*VITFFSKV 24
           +L T+ YEYI T     +L  EI S+Y+FV+N  VIT + KV
Sbjct: 154 NLLTIWYEYIYT--GCYSLAFEIKSKYIFVSNDYVITEYKKV 193


>UniRef50_Q559C2 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 402

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 18/49 (36%), Positives = 29/49 (59%)
 Frame = -2

Query: 674 FIYNLTSTRRTY*NALACETVTT*INIEQNQNSIKTTRNNNGKLSFLKY 528
           FI NL  +   Y N +A E +T   N+E++ N+ K + NNN K++ + Y
Sbjct: 63  FIPNLLESFCKYGNLIALEEIT---NLEKSNNNNKYSNNNNNKINKIIY 108


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,973,543
Number of Sequences: 1657284
Number of extensions: 11195659
Number of successful extensions: 21654
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21623
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)