Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0899
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0507 - 18871260-18871361,18871444-18871560,18871792-188721...    29   3.5  

>07_03_0507 -
           18871260-18871361,18871444-18871560,18871792-18872120,
           18872704-18872871,18873592-18873685,18873707-18873766,
           18874702-18874762,18875258-18875319,18875729-18875856,
           18876783-18876852,18877472-18877630
          Length = 449

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -2

Query: 299 IYESYLDLFHLTHNITYDTKFGLS*TFTFIKFVI 198
           I ++YL L HLT  I  ++ F    T  F KFV+
Sbjct: 195 IMDAYLCLLHLTAGILVESLFNAFATAAFFKFVV 228


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,528,353
Number of Sequences: 37544
Number of extensions: 256775
Number of successful extensions: 366
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 366
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)