Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0897
(754 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 164 5e-41
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 164 5e-41
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 161 6e-40
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 150 9e-37
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 3e-33
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 113 2e-25
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 103 1e-22
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 69 3e-12
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 69 3e-12
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 65 6e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 65 6e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 65 6e-11
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 38 0.010
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 34 0.094
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.16
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 33 0.29
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 33 0.29
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 32 0.38
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 31 0.66
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 1.2
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 1.2
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 2.0
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.7
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.7
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 29 2.7
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.7
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.7
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 29 2.7
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.7
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.7
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical pr... 28 6.2
U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 8.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 164 bits (399), Expect = 5e-41
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLA TLGVKQLIV NKM
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKM 155
Score = 150 bits (364), Expect = 9e-37
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 81.0 bits (191), Expect = 8e-16
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 659
STEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 157 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSS 206
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 656 NQMPWFKGWQVERKEGKADGKCLIEALDAILPP 754
+ MPWFKGW VERKEG A GK L+EALD+I+PP
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 238
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 164 bits (399), Expect = 5e-41
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLA TLGVKQLIV NKM
Sbjct: 132 QTREHALLAQTLGVKQLIVACNKM 155
Score = 150 bits (364), Expect = 9e-37
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 81.0 bits (191), Expect = 8e-16
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 659
STEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 157 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSS 206
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 656 NQMPWFKGWQVERKEGKADGKCLIEALDAILPP 754
+ MPWFKGW VERKEG A GK L+EALD+I+PP
Sbjct: 206 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 238
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 161 bits (390), Expect = 6e-40
Identities = 90/130 (69%), Positives = 94/130 (72%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNG
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKMVPLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSC 615
QTREHALLA TLGVKQL V L T SPD +SRR T Q L
Sbjct: 132 QTREHALLAQTLGVKQL-------VSLRSPTRSPD----------SSRRSDTIQRLFHLS 174
Query: 616 PFLDGTETTC 645
D TETTC
Sbjct: 175 QSPDSTETTC 184
Score = 150 bits (364), Expect = 9e-37
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +3
Query: 663 CLGSRDGRWSVRKAKLTENASLKLSMPSCH 752
C GSRDG + RK L E S +L PS H
Sbjct: 191 CHGSRDGLLNARKETLPERPSSRLLTPSSH 220
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 150 bits (364), Expect = 9e-37
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 98.3 bits (234), Expect = 5e-21
Identities = 43/46 (93%), Positives = 46/46 (100%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 393
TIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 72 TIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 81.0 bits (191), Expect = 8e-16
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 659
STEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 123 STEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSS 172
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/33 (72%), Positives = 28/33 (84%)
Frame = +2
Query: 656 NQMPWFKGWQVERKEGKADGKCLIEALDAILPP 754
+ MPWFKGW VERKEG A GK L+EALD+I+PP
Sbjct: 172 SNMPWFKGWAVERKEGNASGKTLLEALDSIIPP 204
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 138 bits (335), Expect = 3e-33
Identities = 63/67 (94%), Positives = 64/67 (95%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 224 DKLKAER 244
DKLK +
Sbjct: 61 DKLKVTK 67
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 113 bits (271), Expect = 2e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 235 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 294
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EHALL +LGV QLIV VNK+
Sbjct: 295 QTKEHALLLRSLGVTQLIVAVNKL 318
Score = 87.4 bits (207), Expect = 1e-17
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 232
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226
Query: 233 KAERERG 253
+ ERERG
Sbjct: 227 EEERERG 233
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 650
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 323 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 363
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 113 bits (271), Expect = 2e-25
Identities = 53/84 (63%), Positives = 63/84 (75%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G G
Sbjct: 253 TMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGG 312
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EHALL +LGV QLIV VNK+
Sbjct: 313 QTKEHALLLRSLGVTQLIVAVNKL 336
Score = 87.4 bits (207), Expect = 1e-17
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 232
+K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244
Query: 233 KAERERG 253
+ ERERG
Sbjct: 245 EEERERG 251
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/43 (34%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLE 650
+S+ RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++
Sbjct: 341 WSQDRFDEIKNNLSVFLTRQAGFSKPK--FVPVSGFTGENLIK 381
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 103 bits (247), Expect = 1e-22
Identities = 45/84 (53%), Positives = 61/84 (72%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + G
Sbjct: 174 TVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGG 233
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREH++L T GVK L++ VNKM
Sbjct: 234 QTREHSMLVKTAGVKHLVILVNKM 257
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = +2
Query: 47 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 226
G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163
Query: 227 KLKAERERG 253
ERE+G
Sbjct: 164 TNDEEREKG 172
Score = 36.7 bits (81), Expect = 0.018
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKCLGSRDGRW 689
+ E RF+EI+ +++ +++K+G+NP + +VP SG G + + T GS +G W
Sbjct: 264 WEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPT---GS-EGNW 315
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH +LA +GVK + + +NK
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTT 115
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 69.3 bits (162), Expect = 3e-12
Identities = 38/83 (45%), Positives = 51/83 (61%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G E
Sbjct: 95 TINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME------- 147
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH +LA +GVK + + +NK
Sbjct: 148 QTKEHLILAKQVGVKNMAIFINK 170
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTT 115
K ++N+ IGH+D GK+T T
Sbjct: 43 KINVNVGTIGHIDHGKTTLT 62
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 99 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 151
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 152 QTREHLLLARQVGVPLDNIVVFMNKV 177
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 104
Query: 221 LDKLKAER 244
L+ A+R
Sbjct: 105 LEYETAKR 112
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKV 178
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 221 LDKLKAER 244
L+ A+R
Sbjct: 106 LEYETAKR 113
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 100 TINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP------- 152
Query: 436 QTREHALLAFTLGV--KQLIVGVNKM 507
QTREH LLA +GV ++V +NK+
Sbjct: 153 QTREHLLLARQVGVPLDNIVVFMNKV 178
Score = 36.3 bits (80), Expect = 0.023
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTTG---HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 220
++K H+N+ IGHVD GK+T T ++ G R E + +E +G A+
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYEDIDNAPEEKARGITINAFH 105
Query: 221 LDKLKAER 244
L+ A+R
Sbjct: 106 LEYETAKR 113
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 38.7 bits (86), Expect = 0.004
Identities = 25/86 (29%), Positives = 43/86 (50%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 480
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 481 QLIVGVNKMVPLNHHTVSPDLRKSRR 558
++I+ +NK +S +K R+
Sbjct: 127 RVIIVLNKCDLAEKSKISESAKKVRK 152
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTT 115
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 37.5 bits (83), Expect = 0.010
Identities = 27/69 (39%), Positives = 32/69 (46%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 480
VT +D PGH F G AD VL+VAA G E QT + A V
Sbjct: 206 VTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE-------QTAQSIKFAKDANV- 257
Query: 481 QLIVGVNKM 507
QL+V VNK+
Sbjct: 258 QLVVAVNKI 266
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 34.3 bits (75), Expect = 0.094
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGI 145
NI VI HVD+GK+T T L+Y G I
Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAI 52
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 503 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 375
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGID 148
NI + H+DSGK+T T ++Y G ID
Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRID 72
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 139
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCG 139
M +++ N+ VI HVD GKST T L+ K G
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 44
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGI---DKRTIEKFEKEAQ 184
N ++ HVD GKST L+ CG + K+ ++K + E +
Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPGQKQMLDKLQVERE 85
Score = 32.3 bits (70), Expect = 0.38
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 295 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 474
Y + +ID PGH DF + + D +L+VAA G QT + LAF
Sbjct: 102 YLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-------VQAQTIANFWLAFEKN 154
Query: 475 VKQLIVGVNKM 507
+ Q+I +NK+
Sbjct: 155 I-QIIPVINKI 164
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/70 (27%), Positives = 31/70 (44%)
Frame = +1
Query: 298 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 477
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 478 KQLIVGVNKM 507
L++ NK+
Sbjct: 182 NHLMILQNKV 191
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 259 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 189 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 259 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+ I + Y + IID PGH +F M AD V++V A G
Sbjct: 64 VSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 26 IRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 130
IRD P K+ + V+G+VD+GKST G L +
Sbjct: 129 IRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 26 IRD*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIY 130
IRD P K+ + V+G+VD+GKST G L +
Sbjct: 129 IRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVLTH 162
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 565 PHTSRRLATTQLLSLSCPFLD 627
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 4.7
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +2
Query: 65 INIVVIGHVDSGKSTTT 115
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z82283-3|CAB05283.1| 485|Caenorhabditis elegans Hypothetical
protein T23G4.3 protein.
Length = 485
Score = 28.3 bits (60), Expect = 6.2
Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Frame = +3
Query: 465 HPRCQTAHRRSKQNGS----TEPPYSEP-RFEEIKKEVSSYIKKIGYNPAAVAFV--PIS 623
HPR + ++ S TE + P +++E++KE+ + + + AA A P+
Sbjct: 60 HPRRENRDDDGSESDSSSDCTEGAEATPEQWKELEKELDKVVAFMKDSEAAKATETDPVK 119
Query: 624 GWHGDNMLEPSTKCLGSRDGRWSVRKAKLTENASLKL 734
+ L + K + RDG W + K TE L +
Sbjct: 120 RYKNLCQLSMTLKIMSPRDGGWKILHDKRTEAEQLAI 156
>U97002-9|AAB52261.2| 985|Caenorhabditis elegans Hypothetical
protein K09H11.1 protein.
Length = 985
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 333 ISVSRSIND-GNIVLASFELPESNIDCVPR 247
+S ++I+D GNI+ +F P DC+PR
Sbjct: 197 VSSQQAIHDLGNILKLNFSYPPETRDCIPR 226
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 8.2
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 301 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 396
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,115,617
Number of Sequences: 27780
Number of extensions: 394084
Number of successful extensions: 1328
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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