Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0897
(754 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 152 3e-37
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 152 3e-37
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 152 3e-37
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 152 3e-37
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 99 2e-21
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 92 3e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 68 8e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 65 5e-11
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 37 0.017
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 37 0.017
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 36 0.038
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 35 0.050
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 34 0.12
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 34 0.12
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.20
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.27
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.27
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.27
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 31 0.62
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 31 0.62
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 1.1
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.9
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.5
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.5
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 29 4.4
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 29 4.4
At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /... 28 5.8
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.8
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.7
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 7.7
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 7.7
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 152 bits (368), Expect = 3e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 134 bits (324), Expect = 6e-32
Identities = 63/70 (90%), Positives = 64/70 (91%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 659
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 206
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 152 bits (368), Expect = 3e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 134 bits (324), Expect = 6e-32
Identities = 63/70 (90%), Positives = 64/70 (91%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 659
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 206
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 152 bits (368), Expect = 3e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 134 bits (324), Expect = 6e-32
Identities = 63/70 (90%), Positives = 64/70 (91%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 659
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 206
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 152 bits (368), Expect = 3e-37
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK+G
Sbjct: 72 TIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDG 131
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREHALLAFTLGVKQ+I NKM
Sbjct: 132 QTREHALLAFTLGVKQMICCCNKM 155
Score = 134 bits (324), Expect = 6e-32
Identities = 63/70 (90%), Positives = 64/70 (91%)
Frame = +2
Query: 44 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 224 DKLKAERERG 253
DKLKAERERG
Sbjct: 61 DKLKAERERG 70
Score = 74.9 bits (176), Expect = 5e-14
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +3
Query: 510 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 659
+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST
Sbjct: 157 ATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERST 206
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 99 bits (238), Expect = 2e-21
Identities = 46/84 (54%), Positives = 59/84 (70%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G + G
Sbjct: 166 TVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGG 225
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QTREH LA TLGV +LIV VNKM
Sbjct: 226 QTREHVQLAKTLGVSKLIVVVNKM 249
Score = 70.1 bits (164), Expect = 1e-12
Identities = 29/67 (43%), Positives = 48/67 (71%)
Frame = +2
Query: 53 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 232
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 233 KAERERG 253
+ ER +G
Sbjct: 158 EEERLKG 164
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNM 644
+S+ R++EI++++ ++K GYN V F+PISG G NM
Sbjct: 256 WSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNM 296
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 92.3 bits (219), Expect = 3e-19
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK-N 432
T+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 304 TMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDNLK 363
Query: 433 GQTREHALLAFTLGVKQLIVGVNKM 507
GQTREHA + GV+Q+IV +NKM
Sbjct: 364 GQTREHARVLRGFGVEQVIVAINKM 388
Score = 81.8 bits (193), Expect = 4e-16
Identities = 34/65 (52%), Positives = 48/65 (73%)
Frame = +2
Query: 59 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 238
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 239 ERERG 253
ERERG
Sbjct: 298 ERERG 302
Score = 34.3 bits (75), Expect = 0.088
Identities = 15/51 (29%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +3
Query: 525 YSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKCLGS 674
YS+ RF+ IK+ V S+++ + +++ ++P+S N++ PS L S
Sbjct: 393 YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNRLSS 443
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 67.7 bits (158), Expect = 8e-12
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 129 TINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP------- 181
Query: 436 QTREHALLAFTLGVKQLIVGVNK 504
QT+EH LLA +GV ++V +NK
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNK 204
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 41 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 175
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 64.9 bits (151), Expect = 5e-11
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +1
Query: 256 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 435
TI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 117 TIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP------- 169
Query: 436 QTREHALLAFTLGVKQLIVGVNKM 507
QT+EH LLA +GV L+ +NK+
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKV 193
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 50 KEKTHINIVVIGHVDSGKSTTT 115
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 286 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 465
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 466 TLGVKQLIVGVNKMVPLN 519
+ +K +I+ NK+ +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 286 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 465
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 466 TLGVKQLIVGVNKMVPLN 519
+ +K +I+ NK+ +N
Sbjct: 178 MMRLKHIIILQNKIDLIN 195
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 35.5 bits (78), Expect = 0.038
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 280 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 447
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 448 HALLAFTLGVKQLIVGVNKM 507
H + +K +I+ NK+
Sbjct: 166 HLAAVEIMQLKHIIILQNKI 185
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 35.1 bits (77), Expect = 0.050
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = +1
Query: 298 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 477
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 478 KQLIVGVNKM 507
K +I+ NK+
Sbjct: 174 KDIIIIQNKI 183
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 259 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 259 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+ + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 197 MSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 283 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 32 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 151
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGG 142
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 295 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 56 KTHINIVVIGHVDSGKSTTTGHLIYKCG 139
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 295 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 450
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGI 145
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +1
Query: 295 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREH 450
Y V IID PGH DF + D A+L++ + G I+ + Q R +
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRY 184
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGI 145
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 280 FETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 147 YEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 166
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 307 IIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 289 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 68 NIVVIGHVDSGKSTTTGHLIYKCG 139
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 301 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 390
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 504 NGSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 623
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 504 NGSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPIS 623
N +TE + P+ E K E+S++I IG+ V F P S
Sbjct: 61 NVATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCS 100
>At5g62310.1 68418.m07822 incomplete root hair elongation (IRE) /
protein kinase, putative nearly identical to IRE
(incomplete root hair elongation) [Arabidopsis thaliana]
gi|6729346|dbj|BAA89783
Length = 1168
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 345 VLDEISVSRSINDGNIVLASFELPESNIDCVPRSRSAFSL 226
V D +S S ++ S + +DCVPRS++ FSL
Sbjct: 549 VADSARLSNSSRQEDLDEISQRCSDDMLDCVPRSQNTFSL 588
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +3
Query: 528 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 617
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 534 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 644
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 393 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCVPRSRSAFSLSN 220
++D+HS +L+ D + D + ++ N+VL F P+ D V +R A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 310 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 405
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,352,110
Number of Sequences: 28952
Number of extensions: 377121
Number of successful extensions: 1229
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1672953192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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