Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0896
(761 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 26 0.33
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 26 0.44
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 1.3
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 1.3
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 1.3
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 1.3
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 1.3
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 1.3
AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced prot... 23 4.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 4.1
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 7.1
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 26.2 bits (55), Expect = 0.33
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +2
Query: 137 CIMAIWQRQTKLAMSIWTRVALSMVMKLESMRKLCPTSWNRRSHAYRGNATCSLLYMSAA 316
C+++ W + + W L + ++++ + C WN R + L +
Sbjct: 158 CVLSCWTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTR-YCLTPTERLEALCWTQD 216
Query: 317 NYLLSSKPI-TIEHSFIK 367
++ S PI + H+ +K
Sbjct: 217 EDIICSTPIGNLSHALLK 234
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 25.8 bits (54), Expect = 0.44
Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Frame = +2
Query: 137 CIMAIWQRQTKLAMSIWTRVALSMVMKLESMRKLCPTSWNRRSHAYRGNATCSLLYMSAA 316
C+++ W + + W L + ++++ + C WN R + L +
Sbjct: 105 CVLSCWTNIYYIIILAWALFYLLVSLRIDLPWRTCGNPWNTR-YCLTPTERLEALCWTQD 163
Query: 317 NYLLSSKPI-TIEHSFIK 367
++ S PI + H+ +K
Sbjct: 164 EDVICSTPIGNLSHALLK 181
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 350 EHSFIKCRSTLKPYTNKIDCNPRLLKSMKSPVIIIIRSDFIYENMNPDNYHSKC 511
E+S+ K R T K + D R +S + +I + +++ Y N N +NY C
Sbjct: 53 ENSYRKYRKTSKERSR--DRTERE-RSKEPKIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 350 EHSFIKCRSTLKPYTNKIDCNPRLLKSMKSPVIIIIRSDFIYENMNPDNYHSKC 511
E+S+ K R T K + D R +S + +I + +++ Y N N +NY C
Sbjct: 53 ENSYRKYRKTSKERSR--DRTERE-RSKEPKIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 350 EHSFIKCRSTLKPYTNKIDCNPRLLKSMKSPVIIIIRSDFIYENMNPDNYHSKC 511
E+S+ K R T K + D R +S + +I + +++ Y N N +NY C
Sbjct: 53 ENSYRKYRKTSKERSR--DRTERE-RSKEPKIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 350 EHSFIKCRSTLKPYTNKIDCNPRLLKSMKSPVIIIIRSDFIYENMNPDNYHSKC 511
E+S+ K R T K + D R +S + +I + +++ Y N N +NY C
Sbjct: 53 ENSYRKYRKTSKERSR--DRTERE-RSKEPKIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 350 EHSFIKCRSTLKPYTNKIDCNPRLLKSMKSPVIIIIRSDFIYENMNPDNYHSKC 511
E+S+ K R T K + D R +S + +I + +++ Y N N +NY C
Sbjct: 53 ENSYRKYRKTSKERSR--DRTERE-RSKEPKIISSLSNNYNYSNYNNNNYKQLC 103
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +2
Query: 350 EHSFIKCRSTLKPYTNKIDCNPRLLKSMKSPVIIIIRSDFIYENMNPDNYHSKC 511
E+S+ K R T K + D R +S + +I + +++ Y N N +NY C
Sbjct: 53 ENSYRKYRKTSKERSR--DRTERE-RSKEPKIISSLSNNYNYSNYNNNNYKQLC 103
>AB264334-1|BAF44089.1| 30|Apis mellifera ecdysone-induced
protein 75 protein.
Length = 30
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 55 LCGDGRATYHKGTHSLD 5
+CGD + +H G HS +
Sbjct: 11 VCGDKASGFHYGVHSCE 27
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 55 LCGDGRATYHKGTHSLD 5
+CGD + +H G HS +
Sbjct: 69 VCGDKASGFHYGVHSCE 85
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 581 IIK*PQMTSQAIHYLLSVVFSNVSIL 504
IIK P M + +YL S+ S++ +L
Sbjct: 65 IIKNPAMQTATNYYLFSLAISDLILL 90
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,877
Number of Sequences: 438
Number of extensions: 4084
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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