Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0892
(764 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 36 0.039
At1g72800.1 68414.m08416 nuM1-related contains similarity with n... 34 0.12
At4g10640.1 68417.m01738 calmodulin-binding family protein conta... 31 0.64
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 31 0.84
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 31 0.84
At1g06920.1 68414.m00735 ovate family protein 58% similar to ova... 31 0.84
At4g33560.1 68417.m04769 expressed protein 30 1.9
At4g13560.1 68417.m02113 late embryogenesis abundant domain-cont... 30 1.9
At2g03740.1 68415.m00334 late embryogenesis abundant domain-cont... 30 1.9
At4g36600.1 68417.m05195 late embryogenesis abundant domain-cont... 29 2.6
At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase, p... 29 2.6
At1g52690.2 68414.m05950 late embryogenesis abundant protein, pu... 29 3.4
At1g52690.1 68414.m05949 late embryogenesis abundant protein, pu... 29 3.4
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 29 4.5
At4g14713.2 68417.m02262 expressed protein 28 5.9
At4g14713.1 68417.m02261 expressed protein 28 5.9
At4g14720.1 68417.m02264 expressed protein 28 7.8
At3g25140.1 68416.m03139 glycosyl transferase family 8 protein c... 28 7.8
>At4g21020.1 68417.m03041 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P23283 Desiccation-related
protein {Craterostigma plantagineum}; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 266
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +3
Query: 501 KHSKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQD 680
+ +KD T E K A A E K Y + + A A D ++ A+D A+D
Sbjct: 101 EQAKDKAYETKEKAKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAED 160
Query: 681 SL 686
++
Sbjct: 161 TM 162
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/64 (21%), Positives = 27/64 (42%)
Frame = +3
Query: 501 KHSKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQD 680
+ +KD V+ A+ E K Y + +N K A+ A + K + ++ A+
Sbjct: 130 ERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKARHAKEKVKEYGEDTKEKAEG 189
Query: 681 SLQT 692
+T
Sbjct: 190 FKET 193
>At1g72800.1 68414.m08416 nuM1-related contains similarity with nuM1
GI:1279563 from [Medicago sativa]
Length = 335
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/48 (33%), Positives = 33/48 (68%)
Frame = +3
Query: 543 KSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQDSL 686
K++A+ ++E+ SY+DT++E+ S+A+ +K A++A+ +DSL
Sbjct: 99 KTSAKASSESDDSYMDTSSEDESSSAEE--PVNKPAASAAKPATKDSL 144
>At4g10640.1 68417.m01738 calmodulin-binding family protein contains
IQ calmodulin-binding motif, Pfam:PF00612
Length = 423
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 308 AQLPMQSTPQSTPSTRNFRRCRLQQEMLRTPPTKP*LMG 424
A+ QSTP+ P T R C ++E LR+P K L G
Sbjct: 355 AKARTQSTPRRRPMTAKKRLCYAEEESLRSPSFKSCLWG 393
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/85 (24%), Positives = 29/85 (34%)
Frame = +3
Query: 459 DHRRQYQEGCRVRNKHSKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDT 638
D+ Q + + D T E K A E K Y + A + A A D
Sbjct: 106 DYAEQTKNKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADK 165
Query: 639 SKTFAASARDTAQDSLQTTLKFVCE 713
+ A+D A D + T F E
Sbjct: 166 AYETKEKAKDKAYDVKEKTKDFAEE 190
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/85 (24%), Positives = 29/85 (34%)
Frame = +3
Query: 459 DHRRQYQEGCRVRNKHSKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDT 638
D+ Q + + D T E K A E K Y + A + A A D
Sbjct: 70 DYAEQTKNKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADK 129
Query: 639 SKTFAASARDTAQDSLQTTLKFVCE 713
+ A+D A D + T F E
Sbjct: 130 AYETKEKAKDKAYDVKEKTKDFAEE 154
>At1g06920.1 68414.m00735 ovate family protein 58% similar to ovate
protein (GI:23429649) [Lycopersicon esculentum];
contains TIGRFAM TIGR01568 : uncharacterized
plant-specific domain TIGR01568
Length = 315
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = +3
Query: 477 QEGCRVRNKHSKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAA 656
++ CR + KH K VSS S+ + + I + +KS +Q+ +FA
Sbjct: 189 EDACRTKKKHQKTLVSSGRRSSAKSPRIKLRARSPRIQVSPRRSKSRSQNK-QILDSFAV 247
Query: 657 --SARDTAQDSLQTTLKFVCERCVFRYRYWQNLL 752
S+ D ++D ++ ++ + E + ++LL
Sbjct: 248 IKSSIDPSKDFRESMVEMIAENNIRTSNDMEDLL 281
>At4g33560.1 68417.m04769 expressed protein
Length = 95
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +1
Query: 487 AESAINTVKIQSVVHWRVLNRLLRPRRKPENRTSTLPQR 603
A +A+ +K Q V W L RLL RT T+P R
Sbjct: 14 AIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSR 52
>At4g13560.1 68417.m02113 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein similar to LEA protein [Cicer arietinum]
GI:2909420; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 109
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 597 TENTKSAAQSAFDTSKTFAASARDTAQDSLQT 692
TE+ K AQSA D + SARD A D Q+
Sbjct: 23 TESAKQTAQSACDKTADLTQSARDKAADLTQS 54
>At2g03740.1 68415.m00334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein similar to cold-regulated gene cor15b
[Arabidopsis thaliana] GI:456016; contains Pfam profile
PF02987: Late embryogenesis abundant protein
Length = 189
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/68 (29%), Positives = 29/68 (42%)
Frame = +3
Query: 513 DTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQDSLQT 692
+ + S E+ K A+ E GK + T T A F K A +DTA D
Sbjct: 111 EAMDSVAENAKRASDFVTEKGKEVKEETTSRTDKAKD--FIVEK--AGDVKDTAMDMRNK 166
Query: 693 TLKFVCER 716
T K+V ++
Sbjct: 167 TSKYVGDK 174
>At4g36600.1 68417.m05195 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P20075 Embryonic protein
DC-8 {Daucus carota}; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 335
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 513 DTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQDS 683
D +S+ L K+ A+ AAE+ K+Y + A A D + A SA D+A ++
Sbjct: 50 DKISTGLGGKKAEAEEAAESAKNYAYDKAGSAYDNAGYAKDFASDKAGSAYDSAHNA 106
>At3g52200.1 68416.m05733 dihydrolipoamide S-acetyltransferase,
putative similar to dihydrolipoamide acetyltransferase
(E2) subunit of PDC [Arabidopsis thaliana] GI:559395;
contains Pfam profiles PF00198: 2-oxo acid
dehydrogenases acyltransferase (catalytic domain),
PF00364: Biotin-requiring enzyme, PF02817: e3 binding
domain; supporting cDNA
gi|5881964|gb|AF066080.1|AF066080
Length = 637
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +3
Query: 126 ESQAHFVASARRLHLSSTGRRRMQSNLPPRRHRKPPTL*KTRSEGGRAYWWSRE 287
E+ AH V + + S+LPP + P L T ++G A WW +E
Sbjct: 183 ETSAHQVMKPDESTQQKSSIQPDASDLPPHVVLEMPALSPTMNQGNIAKWWKKE 236
>At1g52690.2 68414.m05950 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 169
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 507 SKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQDSL 686
+KD S ++T+ AQ + + SY+ E K+ A A + +K A + ++ L
Sbjct: 58 AKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGIL 117
Query: 687 QTT 695
T
Sbjct: 118 GQT 120
>At1g52690.1 68414.m05949 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 169
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 507 SKDTVSSTLESTKSAAQTAAETGKSYIDTATENTKSAAQSAFDTSKTFAASARDTAQDSL 686
+KD S ++T+ AQ + + SY+ E K+ A A + +K A + ++ L
Sbjct: 58 AKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGIL 117
Query: 687 QTT 695
T
Sbjct: 118 GQT 120
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 157 EDCISLRQEEEGCRATCRREGTGSRPRCR 243
E C S + E G R TCR++ R CR
Sbjct: 733 EPCDSFNESEAGMRVTCRQKCGAPRTDCR 761
>At4g14713.2 68417.m02262 expressed protein
Length = 261
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 756 FQASSANIYSGIRSAHIRILMLFAANP 676
F + N+Y GI R +M FAANP
Sbjct: 160 FYSGKVNVYDGIPPEKARSIMHFAANP 186
>At4g14713.1 68417.m02261 expressed protein
Length = 313
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 756 FQASSANIYSGIRSAHIRILMLFAANP 676
F + N+Y GI R +M FAANP
Sbjct: 160 FYSGKVNVYDGIPPEKARSIMHFAANP 186
>At4g14720.1 68417.m02264 expressed protein
Length = 315
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 756 FQASSANIYSGIRSAHIRILMLFAANP 676
F + N+Y G+ R +M FAANP
Sbjct: 161 FYSGKVNVYDGVPPEKARSIMHFAANP 187
>At3g25140.1 68416.m03139 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 559
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 711 ERCVFRYRYWQNLLGNR 761
E+C Y YWQNL NR
Sbjct: 456 EKCTEEYHYWQNLNENR 472
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,125,869
Number of Sequences: 28952
Number of extensions: 258271
Number of successful extensions: 853
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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