Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0891
(814 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 148 5e-36
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 134 6e-32
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 105 6e-23
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 92 4e-19
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-18
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 89 5e-18
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 71 1e-12
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 62 5e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 9e-10
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 56 3e-08
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 56 3e-08
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 56 3e-08
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 8e-08
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 53 2e-07
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 53 2e-07
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 53 2e-07
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 52 6e-07
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 50 2e-06
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 48 7e-06
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 48 7e-06
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 46 4e-05
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 43 3e-04
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 42 8e-04
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 40 0.002
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 30 1.9
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 30 2.6
SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19) 29 3.4
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2) 29 4.5
SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42) 28 7.8
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 148 bits (359), Expect = 5e-36
Identities = 72/176 (40%), Positives = 103/176 (58%), Gaps = 1/176 (0%)
Frame = +1
Query: 241 PRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPD 420
P + +PFNKNFY+ HP + K+S E+++ R + VSG P F F +
Sbjct: 467 PEKSKIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDE 526
Query: 421 YVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAY-QTGSGKTLAYILPAIVHINNQPPIR 597
+ ++ + Y +PT IQ Q PIA+SG+ + +TGSGKT A++ PA+VHI +QP ++
Sbjct: 527 QMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQ 586
Query: 598 RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVK 765
GDGPI L+ APTREL QQI A FG + VFGG K EQ++ L+ G +
Sbjct: 587 VGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAE 642
Score = 32.7 bits (71), Expect = 0.36
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +3
Query: 738 SPGLGEGSKIVIATPGRLIDFLE 806
S L EG++IV+ATPGRLID ++
Sbjct: 634 SKALQEGAEIVVATPGRLIDHVK 656
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 134 bits (325), Expect = 6e-32
Identities = 72/151 (47%), Positives = 94/151 (62%)
Frame = +1
Query: 313 RSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
R +EV+ YR + ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ---- 112
Query: 493 AMSGKI*LAYQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAA 672
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q+VA
Sbjct: 113 -------------------FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAY 153
Query: 673 DFGHTSYVRNTCVFGGAPKREQARDLERGVK 765
G +R+TC++GGAPK Q R+LERGV+
Sbjct: 154 SVGKHCKLRSTCIYGGAPKGPQIRELERGVE 184
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3
Query: 747 LGEGSKIVIATPGRLIDFLE 806
L G +I IATPGRLID LE
Sbjct: 179 LERGVEICIATPGRLIDMLE 198
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 105 bits (251), Expect = 6e-23
Identities = 56/136 (41%), Positives = 80/136 (58%), Gaps = 5/136 (3%)
Frame = +1
Query: 337 YRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-I* 513
+R + ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + + I
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
Query: 514 LAYQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQQVAADFG 681
+TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI++ FG
Sbjct: 143 GVAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFG 202
Query: 682 HTSYVRNTCVFGGAPK 729
+R V GGA +
Sbjct: 203 RPLGIRTVSVIGGADR 218
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 92.3 bits (219), Expect = 4e-19
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 2/131 (1%)
Frame = +1
Query: 271 FNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 450
F ++YD + V + S V+E R + + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 451 YKEPTPIQAQGWPIAMSGK--I*LAYQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 624
++ PTPIQ Q MSG+ I LA +TGSGKTLAY LP + + + P GD P+AL+
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLA-ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALI 150
Query: 625 LAPTRELAQQI 657
L PTREL QQ+
Sbjct: 151 LTPTRELMQQV 161
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 747 LGEGSKIVIATPGRLID 797
L EG+ +V+ATPGRL+D
Sbjct: 214 LREGADVVVATPGRLLD 230
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 88.6 bits (210), Expect = 5e-18
Identities = 52/134 (38%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +1
Query: 361 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAY-QTGSG 537
VSG I F E F + + + GY+ PTP+Q PI M+G+ +A QTGSG
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSG 528
Query: 538 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 717
KT AY+LP + + Q P+AL +APTRELA+QI A F + ++ +G
Sbjct: 529 KTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYG 588
Query: 718 GAPKREQARDLERG 759
G QA LERG
Sbjct: 589 GVSVPYQASQLERG 602
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 88.6 bits (210), Expect = 5e-18
Identities = 54/141 (38%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAY-QT 528
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+ +A QT
Sbjct: 698 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 757
Query: 529 GSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYV 696
GSGKT A++LP + + N P A+ +APTRELA QI A F H + +
Sbjct: 758 GSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTML 817
Query: 697 RNTCVFGGAPKREQARDLERG 759
R +GG Q R L+ G
Sbjct: 818 RPVVCYGGVSVSHQLRQLQSG 838
Score = 31.9 bits (69), Expect = 0.64
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 747 LGEGSKIVIATPGRLIDFLEKG 812
L G +++ TPGRL DF+EKG
Sbjct: 835 LQSGCNLLVGTPGRLTDFIEKG 856
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 70.5 bits (165), Expect = 1e-12
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*L-AYQTGSGKTLAYILPA 564
++ F + G+ G+ PT IQ QG P+A+SG+ L A +TGSGKTLA+++P
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIPI 108
Query: 565 IVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP-KREQA 741
I + Q DG ALV++PTRELA Q +V G+ + + GG K EQ
Sbjct: 109 IETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQK 167
Query: 742 RDLERGV 762
R ++ +
Sbjct: 168 RIMKTNI 174
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 62.1 bits (144), Expect = 5e-10
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +1
Query: 286 YDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
Y HPT+ + +V++ R+ E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 466 PIQAQGWPIAMSGK-I*LAYQTGSGKTL 546
PIQ Q P+ +SG+ + + TGSGK L
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLL 248
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 61.3 bits (142), Expect = 9e-10
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 1/112 (0%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGKI*L-AYQTGSGKTLAYILPAIVHINNQPPIRRGD 606
QG+K MG+ T IQ + + G+ L A +TGSGKTLA+++P +V + + + +
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRN 643
Query: 607 GPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 762
G ++++PTREL+ Q VA D + GG ++ +A L++GV
Sbjct: 644 GTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGV 695
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHE-VTVSGVEVHNPIQYFEEANFPDYVQQ 432
V QPF K+FY P + K +P E +E+R + E + V G P++ + + +
Sbjct: 59 VVYQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILD 118
Query: 433 GVKTMGYKEPTPIQAQGWPIAMSGK 507
+K Y++PTPIQAQ P+ MSG+
Sbjct: 119 VLKKNSYEKPTPIQAQAIPVIMSGR 143
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/76 (36%), Positives = 39/76 (51%)
Frame = +1
Query: 538 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFG 717
K +Y P + P I G IA+V+ PTRELA QI + F + +R CV+G
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYG 180
Query: 718 GAPKREQARDLERGVK 765
G EQ +L+RG +
Sbjct: 181 GTGISEQIAELKRGAE 196
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 56.8 bits (131), Expect = 2e-08
Identities = 34/81 (41%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQQVAADFGHTSYVR 699
Q+G+GKT + + + I+ + G D ALVLAPTRELAQQIQ+V G +V+
Sbjct: 130 QSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVK 189
Query: 700 NTCVFGGAPKREQARDLERGV 762
GG RE LE GV
Sbjct: 190 CHACIGGTNVREDRMKLEEGV 210
Score = 33.5 bits (73), Expect = 0.21
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 678 WTHILCS*HVCVWWCS*KRASPGLGEGSKIVIATPGRLIDFLEKG 812
+ H+ C H C+ + + L EG +V+ TPGR+ D + +G
Sbjct: 185 YMHVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 227
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 56.4 bits (130), Expect = 3e-08
Identities = 51/165 (30%), Positives = 70/165 (42%), Gaps = 8/165 (4%)
Frame = +1
Query: 292 PHPTVLK-RSPYEVEEYRNNHEVTV-SGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 465
P TV K +E N T S + + F D V + + + +PT
Sbjct: 343 PEATVSKGEKEVTIEAVGQNPAFTPDSDMAFRQRVYSFAGLGLRDDVLKALDALNIHQPT 402
Query: 466 PIQAQGWP-IAMSGKI*LAYQTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVL 627
IQ P I + A QTGSGKTLAY+ P +VH + R G P A ++
Sbjct: 403 VIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIV 461
Query: 628 APTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 762
P RELA QI + A H + R+ + GG ++ DLE V
Sbjct: 462 VPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPV 506
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA-YQTGSGKTLAYILPAIVH 573
FE+ + G+ G+ +P+PIQ + P+A++G+ LA + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 574 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 681
+ + ALVL PTRELA Q Q+ + G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 56.4 bits (130), Expect = 3e-08
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 397 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA-YQTGSGKTLAYILPAIVH 573
FE+ + G+ G+ +P+PIQ + P+A++G+ LA + G+GKT AY++P +
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
Query: 574 INNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG 681
+ + ALVL PTRELA Q Q+ + G
Sbjct: 109 TDTTKNCIQ-----ALVLVPTRELALQTSQICIELG 139
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 54.8 bits (126), Expect = 8e-08
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +1
Query: 439 KTMGYKEPTPIQAQGWPIAMSGKI*LAY-QTGSGKTLAYILPAIVHINNQPPIRRGDGPI 615
+T G+++P+ IQ + + G+ +A Q+G+GKT + + + I+ Q +R P
Sbjct: 13 ETEGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQ--LRE---PQ 67
Query: 616 ALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 759
ALVL+PTRELA QIQ+V G V+ GG E R L+ G
Sbjct: 68 ALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYG 115
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGK-I*LAYQTGSGKTLAYILPAIVHINNQPPIRRGD 606
+ V +G+ PTPIQA P+A+ GK + TG+GKT A++LP + + +P +
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSP 80
Query: 607 GPIALVLAPTRELAQQ 654
LV+ PTRELA Q
Sbjct: 81 AIRVLVITPTRELAIQ 96
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +1
Query: 466 PIQAQGWPIAMSGKI*LAY-QTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTR 639
PIQA + G+ + +TG+GKTL++ LP + + + + +RG P LV+APTR
Sbjct: 98 PIQASTFNYIYDGEDVIGQARTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTR 157
Query: 640 ELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGV 762
ELA+Q+ + S + C++GG P Q + G+
Sbjct: 158 ELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQENAINSGL 196
Score = 28.3 bits (60), Expect = 7.8
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = +3
Query: 747 LGEGSKIVIATPGRLIDFLEKG 812
+ G +++ TPGR++DF+ +G
Sbjct: 192 INSGLDVLVGTPGRILDFMRQG 213
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +1
Query: 445 MGYKEPTPIQAQGWPIAMSGKI*LAY-QTGSGKTLAYILPAIVHINNQPPIRRGDGPIAL 621
MG K+PT IQ P + G+ + +TGSGKT A+ LP + + + P G A+
Sbjct: 25 MGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPY-----GIFAV 79
Query: 622 VLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDL 750
VL PTRELA QI G ++ + GG +QA L
Sbjct: 80 VLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSL 122
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 52.0 bits (119), Expect = 6e-07
Identities = 41/142 (28%), Positives = 72/142 (50%), Gaps = 9/142 (6%)
Frame = +1
Query: 349 HEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG---KI 510
HEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++ +
Sbjct: 86 HEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLADPPVNM 145
Query: 511 *LAYQTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFG-HT 687
Q+G+GKT A++L + ++ P P + L+PT ELA+Q +VA G H
Sbjct: 146 IAQSQSGTGKTAAFVLTMLSRVDATKPY-----PQVICLSPTYELARQTGKVAEAMGKHC 200
Query: 688 SYVR-NTCVFGGA-PKREQARD 747
+++ N V G P+ ++ D
Sbjct: 201 PHIKINYAVRGNQFPRGQKCTD 222
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 52.0 bits (119), Expect = 6e-07
Identities = 43/126 (34%), Positives = 65/126 (51%), Gaps = 18/126 (14%)
Frame = +1
Query: 415 PDYVQQGVKTMGYKEPTPIQAQGWPIAM--SGKI*LAYQTGSGKTLAYILPAIVHIN--- 579
PD + + + G+ +PTPIQ+ P A+ I A +TGSGKTLA+ +P I HI
Sbjct: 139 PD-ILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIEAYK 197
Query: 580 ----NQPPI-------RRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGG-- 720
Q P +G +AL++APTRELA Q++ + V+ + GG
Sbjct: 198 KRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMA 257
Query: 721 APKREQ 738
APK+++
Sbjct: 258 APKQQR 263
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 50.0 bits (114), Expect = 2e-06
Identities = 29/65 (44%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA-YQT 528
EV VSG I FEEAN + V+ YK+PTP+Q PI ++G+ +A QT
Sbjct: 121 EVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQT 180
Query: 529 GSGKT 543
GSGKT
Sbjct: 181 GSGKT 185
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.4 bits (110), Expect = 7e-06
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 325 EVEEYRNNHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 492
++ +R+ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 493 AMSG 504
G
Sbjct: 197 MAHG 200
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 48.4 bits (110), Expect = 7e-06
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Frame = +1
Query: 415 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-I*LAYQTGSGKTLAYILPAIVHINNQPP 591
P V++ +K MG +P PIQ + P S K + + +TG+GK+L ++LP++ Q P
Sbjct: 169 PKLVEK-LKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP 222
Query: 592 IRRGDGPIALVLAPTRELA-QQIQQVAADFGHTSYV 696
RG G I ++ PTRELA Q + +V+ G S V
Sbjct: 223 -GRGYGTI--IVVPTRELASQMLYEVSRLLGDKSIV 255
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 48.4 bits (110), Expect = 7e-06
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 487 PIAMSGKI*LAY-QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQ 663
P+ M GK +A +TGSGKT A+++P + G AL+L+PTRELA Q Q+
Sbjct: 313 PLVMDGKDVVAMARTGSGKTAAFLIPMFEKLQTHTA---KVGIRALILSPTRELALQTQK 369
Query: 664 VAADFGHTSYVRNTCVFGG 720
+ G + ++++ + GG
Sbjct: 370 FIKELGRFTGLKSSVILGG 388
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 48.0 bits (109), Expect = 9e-06
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +1
Query: 388 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LA-YQTGSGKTLAYILPA 564
I FE+ + + + V GYK+PTP+Q PI + +A QTGSGKT A+++P
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPI 933
Query: 565 IVHINNQPP 591
+ I + P
Sbjct: 934 LSRIYMEGP 942
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 46.0 bits (104), Expect = 4e-05
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 5/141 (3%)
Frame = +1
Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAYQT- 528
EV + G P + F +Y + +G PT +Q WP + G+
Sbjct: 178 EVLIQGESAPRPFLTMNNSTFYEYGPR----LGVTVPTSLQKHMWPSLLRGRDVAGVAIE 233
Query: 529 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQQVAAD-FGHTSYV 696
GSGK LAY+LP I I + +GP+ L+L + ++ V D +
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 697 RNTCVFGGAPKREQARDLERG 759
R +FGG + ++ L G
Sbjct: 294 RVQMIFGGGAEEDRIVPLING 314
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +1
Query: 430 QGVKTMGYKEPTPIQAQGWPIAMSGKI*LAY-QTGSGKTLAYILPAIVHINNQPPIRRGD 606
+G+ G+++P+PIQ + P+ G +A ++G+GKT + + A+ ++ I +
Sbjct: 26 RGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENV-----ITESN 80
Query: 607 GPIALVLAPTRELAQQIQQVAADFG-HTSYVRNTCVFGGAPKREQARDLE 753
++L PTRE+A Q++ V G H + GG E + L+
Sbjct: 81 CIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALK 130
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 41.5 bits (93), Expect = 8e-04
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +1
Query: 523 QTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
+TGSGKT A+ LP + + + P AL+L PTRELA QI + G V+
Sbjct: 9 ETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQCEALGSGIGVKC 63
Query: 703 TCVFGGAPKREQA 741
+ GG QA
Sbjct: 64 AVIVGGIDMMSQA 76
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 747 LGEGSKIVIATPGRLIDFLE 806
L + I+IATPGRLID LE
Sbjct: 79 LAKKPHIIIATPGRLIDHLE 98
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/50 (46%), Positives = 27/50 (54%)
Frame = +1
Query: 610 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG 759
P ALVL+PTRELA QIQ+V G V+ GG E R L+ G
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYG 53
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 684 HILCS*HVCVWWCS*KRASPGLGEGSKIVIATPGRLIDFLEKG 812
H+ C H C+ + + L EG +V+ TPGR+ D + +G
Sbjct: 2 HVKC--HACIGGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 373 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 486
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 30.3 bits (65), Expect = 1.9
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +1
Query: 277 KNFYDPHPTVLKRSPYEVEEYRNNHEV-TVSGVEVHNPIQYFEEANFPDYVQQGVKTMGY 453
K D + LK E +E+ N + TV+ + P+ E P V + + +G+
Sbjct: 467 KELPDENDENLKEFAPEDDEFLKNLSLDTVAQMAAGIPV----ETETPPEVYKALGQLGF 522
Query: 454 KEPTPIQAQGWPIAMSGKI*LAY-QTGSGKTLAYILPAIVHINNQP 588
Q Q +SG L TG+GK+L Y LPA ++ P
Sbjct: 523 SSFRAGQEQAVMRILSGMSSLVVLSTGAGKSLCYQLPAYMYHKRSP 568
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.9 bits (64), Expect = 2.6
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 283 FYDPHPTVLKRSPYEVEEYRNN--HEVTVSGVEVHNPIQYFEEANFPDY 423
+ D VL E EE NN H++ + + +HNP YFE+ + DY
Sbjct: 217 YRDEDDGVLVPIEQEAEEEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51151| Best HMM Match : Vicilin_N (HMM E-Value=0.19)
Length = 493
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -3
Query: 176 YCHRCQIEKNYRRICCLL----QIWNHRFHGYYSSYQT*LFF 63
+CHR Q NY C ++ Q+W+H + SS ++ +F+
Sbjct: 178 FCHRQQYRHNYYNSCLVITFFRQMWDHLWANVGSSVESSVFY 219
>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
Length = 694
Score = 29.1 bits (62), Expect = 4.5
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -1
Query: 778 VAMTILLPSPSPGLALF*EHHQTHTCYEH 692
+ T ++ PSP + ++ HHQ H + H
Sbjct: 191 ITSTTIITMPSPSIVIYRRHHQHHQHHHH 219
>SB_32934| Best HMM Match : K_tetra (HMM E-Value=7.79963e-42)
Length = 1207
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 3/64 (4%)
Frame = +1
Query: 409 NFPDYVQQGVKTMGY---KEPTPIQAQGWPIAMSGKI*LAYQTGSGKTLAYILPAIVHIN 579
NF DYV + Y KE IQ WPI G L Q + P+ HI
Sbjct: 421 NFMDYVSYAKECSPYGKNKESRRIQGCPWPIHQKGTAVLVDQELLNGVEKEVAPSTPHIV 480
Query: 580 NQPP 591
PP
Sbjct: 481 AVPP 484
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,453,841
Number of Sequences: 59808
Number of extensions: 560020
Number of successful extensions: 1507
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1479
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2263654701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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