Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0891
         (814 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    80   9e-17
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           27   0.69 
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   2.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.1  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   2.8  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   6.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 79.8 bits (188), Expect = 9e-17
 Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
 Frame = +1

Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKI*LAY-QT 528
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G+  +A  QT
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQT 220

Query: 529 GSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVRN 702
           GSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      F H + ++ 
Sbjct: 221 GSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKV 280

Query: 703 TCVFGGAPKREQARDLERG 759
              +GG   + Q + L RG
Sbjct: 281 CVSYGGTAVQHQLQ-LMRG 298



 Score = 31.5 bits (68), Expect = 0.032
 Identities = 10/19 (52%), Positives = 17/19 (89%)
 Frame = +3

Query: 756 GSKIVIATPGRLIDFLEKG 812
           G  +++ATPGRL+DF+++G
Sbjct: 299 GCHVLVATPGRLLDFIDRG 317


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 0.69
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 105 TVVPNLEEATNSAIILLDLATVAIDLEDLEDLVGKKNSLE 224
           T++ +L+E   S +  LDL    ID  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 591 RRLVVYVHNGWQDVGQRFAGTRLVRQLNLSRH-SYRPALSL 472
           RRL   + N   DV    A  RL R+LNL+++ +Y  +L+L
Sbjct: 159 RRLWFGIANIEDDVSVLMAELRLYRKLNLNKYTTYNTSLTL 199


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -3

Query: 281  FLLKGWSETNPNL---GDACSDLQRILF----SHQILQILQIYCH 168
            F+ KG  E +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 154 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFFLTQ 14
           RR+ A+  A ++F          ++   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 16/70 (22%), Positives = 26/70 (37%)
 Frame = +1

Query: 226 SEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 405
           SE     +   +++P     Y+P P VL  +   V E   + ++ +    V       EE
Sbjct: 97  SEDVESSIPVSTIEPNLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQEE 156

Query: 406 ANFPDYVQQG 435
           A    Y   G
Sbjct: 157 AQIDVYHVDG 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 856,260
Number of Sequences: 2352
Number of extensions: 17759
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)