Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0890
(760 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_56| Best HMM Match : Actin (HMM E-Value=0) 183 2e-46
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 183 2e-46
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 172 3e-43
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 165 5e-41
SB_54| Best HMM Match : Actin (HMM E-Value=0) 134 7e-32
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 3e-25
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 101 8e-22
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 71 8e-13
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 69 4e-12
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 65 7e-11
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 46 3e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 33 0.25
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 33 0.33
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 33 0.33
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 33 0.33
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 32 0.44
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.77
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 31 1.0
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 31 1.0
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.8
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12) 30 1.8
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.8
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 30 1.8
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.8
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 30 1.8
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.8
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.3
SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18) 30 2.3
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 30 2.3
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3) 29 3.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 29 3.1
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 4.1
SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 29 5.4
SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45) 29 5.4
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 7.2
SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_7076| Best HMM Match : IncA (HMM E-Value=0.74) 28 7.2
SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54) 28 9.5
SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 183 bits (445), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLY 144
Score = 172 bits (418), Expect = 3e-43
Identities = 80/83 (96%), Positives = 83/83 (100%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCYVALDFEQEM
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEM 228
Score = 125 bits (302), Expect = 3e-29
Identities = 57/62 (91%), Positives = 61/62 (98%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 183 bits (445), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLY 143
Score = 169 bits (411), Expect = 2e-42
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKL YVALDFEQEM
Sbjct: 205 EREIVRDIKEKLAYVALDFEQEM 227
Score = 122 bits (295), Expect = 2e-28
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 183 bits (445), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 119
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 120 TQIMFETFNSPAMYVAIQAVLSLY 143
Score = 173 bits (420), Expect = 2e-43
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 145 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 204
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCYVALDFEQEM
Sbjct: 205 EREIVRDIKEKLCYVALDFEQEM 227
Score = 124 bits (298), Expect = 1e-28
Identities = 56/60 (93%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 183 bits (445), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLY 144
Score = 173 bits (420), Expect = 2e-43
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 146 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 205
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCYVALDFEQEM
Sbjct: 206 EREIVRDIKEKLCYVALDFEQEM 228
Score = 130 bits (313), Expect = 2e-30
Identities = 58/62 (93%), Positives = 62/62 (100%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 183 bits (445), Expect = 2e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLY 144
Score = 125 bits (302), Expect = 3e-29
Identities = 55/62 (88%), Positives = 61/62 (98%)
Frame = +2
Query: 77 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAR 256
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA+
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 257 AK 262
+K
Sbjct: 61 SK 62
Score = 74.1 bits (174), Expect = 1e-13
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = +3
Query: 627 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 758
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 201
Score = 51.6 bits (118), Expect = 7e-07
Identities = 24/28 (85%), Positives = 26/28 (92%), Gaps = 2/28 (7%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYE--GYA 587
SGRTTGIV+DSGDGVSHTVPIYE GY+
Sbjct: 146 SGRTTGIVMDSGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 172 bits (418), Expect = 3e-43
Identities = 80/83 (96%), Positives = 83/83 (100%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIV+DSGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTA
Sbjct: 108 SGRTTGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTA 167
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCYVALDFEQEM
Sbjct: 168 EREIVRDIKEKLCYVALDFEQEM 190
Score = 124 bits (298), Expect = 1e-28
Identities = 55/60 (91%), Positives = 60/60 (100%)
Frame = +2
Query: 83 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA++K
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 348
SKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 60 SKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = +1
Query: 421 NREKMTQIMFETFNTPAMYVAIQAVLSLY 507
N + M +IMFETFN+PAMYVAIQAVLSLY
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLY 106
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 165 bits (400), Expect = 5e-41
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTTTA
Sbjct: 24 SGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTA 83
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCYVALDF QE+
Sbjct: 84 EREIVRDIKEKLCYVALDFYQEI 106
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 442 IMFETFNTPAMYVAIQAVLSLY 507
IMFE FN+PA+YVAIQAVLSLY
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLY 22
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 134 bits (324), Expect = 7e-32
Identities = 57/83 (68%), Positives = 72/83 (86%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +TA
Sbjct: 2190 SGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTA 2249
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
E++I+RD+KE LCY A+D+E+E+
Sbjct: 2250 EQQIIRDLKETLCYCAMDYEREL 2272
Score = 91.1 bits (216), Expect = 9e-19
Identities = 40/60 (66%), Positives = 50/60 (83%)
Frame = +1
Query: 328 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 507
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 112 bits (269), Expect = 3e-25
Identities = 49/81 (60%), Positives = 63/81 (77%)
Frame = +3
Query: 513 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 692
G TG+V+DSGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+
Sbjct: 150 GLLTGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTAD 209
Query: 693 REIVRDIKEKLCYVALDFEQE 755
E VR +KEKLCYV + EQE
Sbjct: 210 FETVRMMKEKLCYVGYNIEQE 230
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 RGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMT 438
R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM
Sbjct: 65 RYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMI 124
Query: 439 QIMFETFNTPAMYVAIQAVLSLY 507
++MFE + +Y+AIQAVL+LY
Sbjct: 125 EVMFENYQFEGVYIAIQAVLTLY 147
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Frame = +2
Query: 95 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEA 253
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEA 61
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 101 bits (241), Expect = 8e-22
Identities = 43/71 (60%), Positives = 61/71 (85%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
+GRTTG+VLD+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++
Sbjct: 171 TGRTTGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSS 230
Query: 690 EREIVRDIKEK 722
E EIVR IKE+
Sbjct: 231 ELEIVRTIKEE 241
Score = 74.1 bits (174), Expect = 1e-13
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = +1
Query: 376 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 507
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLY
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLY 169
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 71.3 bits (167), Expect = 8e-13
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYSFTTT 686
SG T G+ L SG + IYEG+ L H + L++ G LT+ L + L + RG++FT++
Sbjct: 775 SGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSS 834
Query: 687 AEREIVRDIKEKLCYVALDFEQEM 758
+ +IV DIKEK+CY++ D +E+
Sbjct: 835 SGWQIVNDIKEKICYLSKDHLKEV 858
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Frame = +2
Query: 71 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 241
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 242 GDEARAK 262
GD A AK
Sbjct: 753 GDAAVAK 759
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/78 (38%), Positives = 46/78 (58%)
Frame = +3
Query: 522 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 701
TG V+DSGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E
Sbjct: 62 TGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMET 121
Query: 702 VRDIKEKLCYVALDFEQE 755
+ IKE+ Y+ D +E
Sbjct: 122 AKTIKERWGYICPDIAKE 139
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 64.9 bits (151), Expect = 7e-11
Identities = 26/74 (35%), Positives = 47/74 (63%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 465
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 466 PAMYVAIQAVLSLY 507
PA ++ +VL+ +
Sbjct: 63 PAFFLCKNSVLTAF 76
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 501 AVRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 662
A +GR+ G+V+DSG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 75 AFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 202
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +1
Query: 280 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 393
K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 299 KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.44
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 522 TGIVLDSGDGVSHTVPI 572
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -1
Query: 199 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 83
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 33.1 bits (72), Expect = 0.25
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/48 (41%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 32.3 bits (70), Expect = 0.44
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.77
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 429
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +2
Query: 488 KPCSRCTVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHE 649
K R + R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 934 KKSIRDSFRRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +2
Query: 446 CSKHSTRPPCTSPSKPCSRCTVRSYHRYRAG 538
C H+ R P T+PS PC S Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_34754| Best HMM Match : TSP_1 (HMM E-Value=7.4e-12)
Length = 439
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/73 (30%), Positives = 28/73 (38%)
Frame = +1
Query: 382 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPT 561
PVL A P A + TQ + P ++ V + P PPV P TV P
Sbjct: 22 PVLTEAATTQPPAPPPEPTQAPVADTDPPTNPPSVVEVTTTQAPPPPPVVTEAPTTV-PP 80
Query: 562 PCPSTRDTHSPTP 600
P + T P P
Sbjct: 81 PVVTDAPTTVPPP 93
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 402 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 494
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/84 (26%), Positives = 34/84 (40%)
Frame = +1
Query: 343 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
T E VAPE + E+ L + +T + ET TP VA + + G + P
Sbjct: 4915 TMVPETTVAPET--TMAPESTLAAETTMAPVTTVASETTKTPDTTVAPETTMVPEGTLAP 4972
Query: 523 PVSCWTPATVSPTPCPSTRDTHSP 594
+ TV+P + T +P
Sbjct: 4973 ETTMAPETTVAPETTMAPETTVAP 4996
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/84 (25%), Positives = 33/84 (39%)
Frame = +1
Query: 343 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
T E VAPE + E ++P+ T + ET TP VA + ++ V
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 523 PVSCWTPATVSPTPCPSTRDTHSP 594
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 169 VPLDRGKAPPSGRDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNW--DDMEKIWHH 342
V L + +GR+ G+ +CR+ K ++TL + I G+ + D EK+W+H
Sbjct: 441 VTLSQNVVSVTGREESGGSGTQVCRK----KAPLITLSHVIRMGLALSLVSDVKEKVWYH 496
Query: 343 TFYN 354
T N
Sbjct: 497 TCPN 500
>SB_4077| Best HMM Match : PDZ (HMM E-Value=3.5e-18)
Length = 458
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/71 (29%), Positives = 30/71 (42%)
Frame = +3
Query: 360 ACRPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRSGRTTGIVLD 539
ACR R P P P+ + ++D D +I R P R + V +T G+ +
Sbjct: 205 ACRGRKDPRNKPPQPPPPEPTENDEDAD---SISRKRRGIGEP-RTVIVNKDKTEGLGIS 260
Query: 540 SGDGVSHTVPI 572
G H VPI
Sbjct: 261 ITGGKEHGVPI 271
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 29.9 bits (64), Expect = 2.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNE 357
P + G + NWD ++IW +TF E
Sbjct: 292 PFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 89 EVAALVVDNGSGMCKAGFAGDDAPRAV 169
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
Y +L V +PV T+ + + N + TQ+M T P Y + V + Y PV
Sbjct: 116 YTQLMVFTRYNPVRYTQLMVFTRYNHVRYTQLMVFTRYNPVRYAQLM-VFTRYNPV 170
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 349 YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPV 516
Y EL V +PV TE + + N + Q+M T P Y + V + Y PV
Sbjct: 475 YTELVVFTRYNPVRYTELVVFTRHNPVRYAQLMVFTRYNPVRYAQL-IVFTRYNPV 529
>SB_43973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3142
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = -1
Query: 265 LFCSCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 122
L C C + ++LSH + H L +HG R +SCET L T
Sbjct: 854 LTCLCCKTMEHIVLSHLNKH-LSRFNILSNAQHGFRQGLSCETQLVLT 900
>SB_12542| Best HMM Match : Collagen (HMM E-Value=1.3)
Length = 532
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 581 SLVDGHGVGDT-VAGVQHDTGGTTGPYSEST 492
+LV+G GV T ++ +QH T TTGPY + +
Sbjct: 404 NLVEGKGVSRTAISALQHWTWFTTGPYVDES 434
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 29.5 bits (63), Expect = 3.1
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 8/94 (8%)
Frame = +1
Query: 355 ELRVAPEEHPVL-LTEAP---LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
E APE V T AP + P+ +T + ET PA A++ +L +VP
Sbjct: 1323 ETSAAPETTMVPETTSAPSTTMAPETTAAPVTTMAPETTAVPATIAALETTATLETTMVP 1382
Query: 523 PVSCWTPATVSP--TPCPSTRDTHSPT--PSCVW 612
+ + TV+P T P+T T P W
Sbjct: 1383 ETTASSETTVAPETTDAPATTLAPETTAAPETTW 1416
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 4/84 (4%)
Frame = +1
Query: 355 ELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVP 522
E VAPE L E P+ + +T P VAI++ L+L V P
Sbjct: 19 ETTVAPETTSAADTTLAPETTFAPETTVPPESTAAPDTTVAPETTVAIESTLALESTVAP 78
Query: 523 PVSCWTPATVSPTPCPSTRDTHSP 594
+ T TV+P + T +P
Sbjct: 79 ETTVATETTVAPETTAAPESTLAP 102
>SB_51831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1065
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +1
Query: 361 RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWT 540
++A + +P + E N K + +K+ Q M +T + + ++ + +P W
Sbjct: 866 KIASKHNPEMTEEMRANLKEHLDKINQRMNDTMT---LLYNMPKIMRKFAFELPN---WA 919
Query: 541 PATVSPTPCPSTRDTHSP-TPSCV 609
P PT P+ + T +P TPS V
Sbjct: 920 PKIPLPTEPPTEKMTEAPTTPSAV 943
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/65 (24%), Positives = 25/65 (38%)
Frame = +1
Query: 400 APLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTR 579
A P A + + +NTP ++ + P +PP + TP+ P P PS
Sbjct: 888 ASYQPSAPSSMPAPVPLQPYNTPMPPISSTPYQA--PPTLPPTTLTTPSWSQPVPVPSMY 945
Query: 580 DTHSP 594
P
Sbjct: 946 QPQPP 950
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = -1
Query: 265 LFCSCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQ 101
+F +CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 461 IFATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNK 519
Query: 100 RGNFFVAHLE 71
G V L+
Sbjct: 520 HGQVDVLLLD 529
>SB_11339| Best HMM Match : TGF_beta (HMM E-Value=5.60519e-45)
Length = 481
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = +1
Query: 451 ETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPTPCPSTRD 582
+ + P + +Q +++ P + P +C TP +SP T D
Sbjct: 288 DNYLRPTNHATVQTIVNSLDPSIAPKACCTPNELSPISILYTED 331
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 28.7 bits (61), Expect = 5.4
Identities = 23/65 (35%), Positives = 28/65 (43%)
Frame = +2
Query: 512 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRR 691
RS R R+ RRR R R+P H S SRSR R P R+R H R
Sbjct: 223 RSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRHSRSRSPTHRRHR 281
Query: 692 AGNRS 706
+ + S
Sbjct: 282 SRSHS 286
>SB_29377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 28.3 bits (60), Expect = 7.2
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +2
Query: 479 SPSKPCSRCTVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPH 658
S S+P SR RS R R R R P ++ + + R SRSR + P P+
Sbjct: 153 SDSRPRSRYRGRSRSRSRDRYRER-RPRKSRSKSLDRSRR------SRSRSYSRPSPSPY 205
Query: 659 RARLLVHYHRRAGNRS 706
R+R RR+ +RS
Sbjct: 206 RSRRSRSRTRRSRSRS 221
>SB_21667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 812
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +3
Query: 420 QQREDDPDHVRNIQHARHVRRHPSRALAVRSGRTTGIVLDSGDGVSHTVPIYEGYALPH 596
Q+R D V N+ H R + +A+ SG+T+ S D V PI G LPH
Sbjct: 210 QERRSTHDVVPNLGHGVASRHAQASPIAMTSGKTS----QSTDAVCRRPPIERG-TLPH 263
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 174 GNTARGASSPAKPALHIPEPLSTT 103
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +2
Query: 557 PHRAHLRGIRTPPR-HPASGLSRSRPHRLPHEDPH 658
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_29856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 405
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = +2
Query: 485 SKPCSRCTVRSYH--RYRAGLRRRCLPHRAHLRGIRTPP 595
S PC+ C H + L R PHR LRG +T P
Sbjct: 352 SPPCASCQQYDNHAMNFDVLLNGRSYPHRTPLRGNQTTP 390
>SB_7076| Best HMM Match : IncA (HMM E-Value=0.74)
Length = 282
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = +3
Query: 366 RPRGTPSPAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVR------SGRTTG 527
R R P PA+ ++R P I H R VR+ RA AV SG G
Sbjct: 82 RGRRCPPPANAYRSGKHRRRRAKFPTPDNEITHYRQVRKKYKRAFAVTHAVSVASGVAAG 141
Query: 528 IVLDSGDGVS 557
++ +G GVS
Sbjct: 142 VLSSAGLGVS 151
>SB_55639| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3
Query: 329 FSMSSQLVTIPCSMGYLRVRIPLLLVPHLLHKSPSVP 219
F +S LVT S + + P LLVPH L K S+P
Sbjct: 571 FEISPPLVT---SSSHSLTQSPTLLVPHRLKKKESIP 604
>SB_43791| Best HMM Match : Hep_59 (HMM E-Value=0.54)
Length = 214
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -3
Query: 755 LLLEVKSDVAQLLLDVTNDFPLGGGSERVAALGEDLHEVVCEVAT 621
L+LEV + + L D+ ND+PL G V+ + L E ++AT
Sbjct: 34 LILEVDLEYPKSLYDLHNDYPLAAGKVNVSK--DMLSEYCDKIAT 76
>SB_38123| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 853
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/78 (23%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +1
Query: 376 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPAT-- 549
+ V+L A + + K+ + + +T + +++ YG VVP +TPA
Sbjct: 298 DEQVVLLRADIKSFVGQRKLDEELAQTTRFVCDEEEMLKLINTYGQVVPIKHNYTPAVLN 357
Query: 550 -VSPTPCPSTRDTHSPTP 600
V+ P P + +++P P
Sbjct: 358 HVNTLPQPHNKISNTPKP 375
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,713,897
Number of Sequences: 59808
Number of extensions: 678688
Number of successful extensions: 2704
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 2272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2685
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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