Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0890
(760 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 183 1e-46
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 182 2e-46
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 182 2e-46
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 181 5e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 7e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 180 9e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 180 9e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 162 2e-40
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 155 3e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 154 5e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 107 8e-24
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 95 6e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 81 1e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 68 8e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 66 2e-11
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 49 4e-06
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 46 2e-05
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 46 2e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 31 1.1
At3g28790.1 68416.m03593 expressed protein 30 1.5
At2g39480.1 68415.m04845 ABC transporter family protein related ... 30 1.5
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 30 1.9
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 30 1.9
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 29 2.5
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 29 2.5
At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical t... 29 2.5
At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical t... 29 2.5
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 29 3.4
At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family p... 29 4.4
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 4.4
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 4.4
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 5.9
At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family... 28 5.9
At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identica... 28 5.9
At3g55320.1 68416.m06144 ABC transporter family protein similar ... 28 7.7
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 183 bits (445), Expect = 1e-46
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLY 145
Score = 167 bits (407), Expect = 5e-42
Identities = 78/83 (93%), Positives = 82/83 (98%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+A
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRD+KEKL Y+ALD+EQEM
Sbjct: 207 EREIVRDVKEKLAYIALDYEQEM 229
Score = 107 bits (258), Expect = 6e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLY 145
Score = 166 bits (403), Expect = 2e-41
Identities = 78/83 (93%), Positives = 82/83 (98%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRD+KEKL Y+ALDFEQE+
Sbjct: 207 EREIVRDMKEKLSYIALDFEQEL 229
Score = 107 bits (258), Expect = 6e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFNTPAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNTPAMYVAIQAVLSLY 145
Score = 165 bits (400), Expect = 4e-41
Identities = 77/83 (92%), Positives = 82/83 (98%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRD+KEKL Y+ALD+EQE+
Sbjct: 207 EREIVRDMKEKLSYIALDYEQEL 229
Score = 107 bits (258), Expect = 6e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 181 bits (440), Expect = 5e-46
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN PAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNVPAMYVAIQAVLSLY 145
Score = 163 bits (396), Expect = 1e-40
Identities = 78/83 (93%), Positives = 80/83 (96%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKL YVALD+EQE+
Sbjct: 207 EREIVRDIKEKLAYVALDYEQEL 229
Score = 107 bits (258), Expect = 6e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (439), Expect = 7e-46
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLY 145
Score = 162 bits (393), Expect = 3e-40
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKL +VA+D+EQEM
Sbjct: 207 EREIVRDIKEKLSFVAVDYEQEM 229
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (439), Expect = 7e-46
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLY 145
Score = 162 bits (393), Expect = 3e-40
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKL +VA+D+EQEM
Sbjct: 207 EREIVRDIKEKLSFVAVDYEQEM 229
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (439), Expect = 7e-46
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNSPAMYVAIQAVLSLY 145
Score = 162 bits (393), Expect = 3e-40
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKL +VA+D+EQEM
Sbjct: 207 EREIVRDIKEKLSFVAVDYEQEM 229
Score = 103 bits (247), Expect = 1e-22
Identities = 44/59 (74%), Positives = 53/59 (89%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEA++K
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSK 63
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 180 bits (438), Expect = 9e-46
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN PAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLY 145
Score = 168 bits (409), Expect = 3e-42
Identities = 79/83 (95%), Positives = 82/83 (98%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCY+ALD+EQE+
Sbjct: 207 EREIVRDIKEKLCYIALDYEQEL 229
Score = 107 bits (258), Expect = 6e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 180 bits (438), Expect = 9e-46
Identities = 81/84 (96%), Positives = 82/84 (97%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKM
Sbjct: 62 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKM 121
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETFN PAMYVAIQAVLSLY
Sbjct: 122 TQIMFETFNAPAMYVAIQAVLSLY 145
Score = 168 bits (409), Expect = 3e-42
Identities = 79/83 (95%), Positives = 82/83 (98%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTA
Sbjct: 147 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTA 206
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCY+ALD+EQE+
Sbjct: 207 EREIVRDIKEKLCYIALDYEQEL 229
Score = 107 bits (258), Expect = 6e-24
Identities = 48/59 (81%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEA++K
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 162 bits (394), Expect = 2e-40
Identities = 69/84 (82%), Positives = 79/84 (94%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKM
Sbjct: 63 ARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKM 122
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFE+F P+MY+ IQAVLSLY
Sbjct: 123 TQIMFESFAFPSMYIGIQAVLSLY 146
Score = 161 bits (390), Expect = 6e-40
Identities = 73/83 (87%), Positives = 81/83 (97%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+A
Sbjct: 148 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSA 207
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCY+A+D+EQEM
Sbjct: 208 EREIVRDIKEKLCYIAVDYEQEM 230
Score = 102 bits (244), Expect = 3e-22
Identities = 44/59 (74%), Positives = 54/59 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARAK 262
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEA+A+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQAR 64
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 155 bits (376), Expect = 3e-38
Identities = 73/101 (72%), Positives = 82/101 (81%)
Frame = +1
Query: 205 RDGRYGTEGLLCRR*GTSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 384
RDG E + G + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 385 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 507
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLY 134
Score = 154 bits (374), Expect = 5e-38
Identities = 69/83 (83%), Positives = 79/83 (95%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+A
Sbjct: 136 SGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSA 195
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
EREIVRDIKEKLCYVALD+EQEM
Sbjct: 196 EREIVRDIKEKLCYVALDYEQEM 218
Score = 60.9 bits (141), Expect = 9e-10
Identities = 28/53 (52%), Positives = 36/53 (67%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEARA 259
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E A
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHA 51
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 154 bits (374), Expect = 5e-38
Identities = 66/84 (78%), Positives = 78/84 (92%)
Frame = +1
Query: 256 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 435
++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKM
Sbjct: 17 ARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKM 76
Query: 436 TQIMFETFNTPAMYVAIQAVLSLY 507
TQIMFETF P+MY+ +QA LSL+
Sbjct: 77 TQIMFETFAVPSMYIGMQAALSLH 100
Score = 132 bits (320), Expect = 2e-31
Identities = 65/83 (78%), Positives = 73/83 (87%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 689
SGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+A
Sbjct: 102 SGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSA 158
Query: 690 EREIVRDIKEKLCYVALDFEQEM 758
ERE+VRDIKE+ Y+ALD+EQEM
Sbjct: 159 EREVVRDIKEQFGYIALDYEQEM 181
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 107 bits (257), Expect = 8e-24
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = +1
Query: 271 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 450
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 451 ETFNTPAMYVAIQAVLSLY 507
E +N +++ IQAVL+LY
Sbjct: 126 EKYNFAGVFIQIQAVLTLY 144
Score = 103 bits (248), Expect = 1e-22
Identities = 42/81 (51%), Positives = 63/81 (77%)
Frame = +3
Query: 513 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 692
G TG+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA+
Sbjct: 147 GLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTAD 206
Query: 693 REIVRDIKEKLCYVALDFEQE 755
E VR+IKEKLCY++ D+++E
Sbjct: 207 FETVREIKEKLCYISYDYKRE 227
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGD 247
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGE 57
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 94.7 bits (225), Expect = 6e-20
Identities = 40/76 (52%), Positives = 53/76 (69%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 456
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 457 FNTPAMYVAIQAVLSL 504
FN P +Y+A+ +VL+L
Sbjct: 146 FNVPGLYIAVNSVLAL 161
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/78 (35%), Positives = 47/78 (60%)
Frame = +3
Query: 522 TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREI 701
TG+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDV 232
Query: 702 VRDIKEKLCYVALDFEQE 755
R +KE CY D +E
Sbjct: 233 ARKVKEMYCYTCSDIVKE 250
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 98 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 184
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 80.6 bits (190), Expect = 1e-15
Identities = 34/83 (40%), Positives = 54/83 (65%)
Frame = +1
Query: 259 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 438
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 439 QIMFETFNTPAMYVAIQAVLSLY 507
++MFE + PA+++A VL+ +
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSF 167
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 187
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +3
Query: 510 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 668
+GR T +V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 169 TGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 67.7 bits (158), Expect = 8e-12
Identities = 36/105 (34%), Positives = 57/105 (54%)
Frame = +3
Query: 444 HVRNIQHARHVRRHPSRALAVRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 623
H +++ H R P L S +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSIL---SKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 624 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 758
+ T+YL ++++ R S E +V D KEKLC+V+LD +++
Sbjct: 187 KAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDL 229
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +1
Query: 277 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 456
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 457 FNTPAMYVA-IQAVLSLY 507
F ++Y+A Q+++ LY
Sbjct: 121 FGFSSLYIAHPQSLVHLY 138
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 193
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 462
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 463 TPAMYVAIQAVLSLY 507
Y + QAVLSLY
Sbjct: 117 VSGFYASEQAVLSLY 131
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 259 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 432
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 1e-08
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +2
Query: 86 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 187
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +1
Query: 286 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 462
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 463 TPAMYVAIQAVLS 501
PA+ + A S
Sbjct: 145 VPAVAFGVDAAFS 157
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/78 (29%), Positives = 42/78 (53%)
Frame = +3
Query: 525 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIV 704
GIVL G +H++P +G + R ++ G +TDYL ++L+ + ++ E
Sbjct: 171 GIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKA 230
Query: 705 RDIKEKLCYVALDFEQEM 758
D+K + CY+A D+ E+
Sbjct: 231 EDLKLEHCYIAPDYASEI 248
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 101 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 247
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 516 RTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFTTTAE 692
RT+GIV++ G V +PI G + + + LT +L + + E SF +
Sbjct: 249 RTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT 308
Query: 693 REIVRDIKEKLCYVALDFEQEM 758
VR +KEKLCYVALD++ E+
Sbjct: 309 ---VRTLKEKLCYVALDYKAEL 327
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 46.4 bits (105), Expect = 2e-05
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 516 RTTGIVLDSGDGVSHTVPIYEGYALPHAILR-LDLAGRDLTDYLMKILTERGYSFTTTAE 692
RT+GIV++ G V +PI G + + + LT +L + + E SF +
Sbjct: 249 RTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENNISFQSLYT 308
Query: 693 REIVRDIKEKLCYVALDFEQEM 758
VR +KEKLCYVALD++ E+
Sbjct: 309 ---VRTLKEKLCYVALDYKAEL 327
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 222 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 85
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces
cerevisiae]
Length = 1252
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 497 SRCTVRSYHRYRAGLRRRCL-PHRAHLRGIRTPPRHPASG 613
S T +SY ++AG R R L P + L +R PPR PA+G
Sbjct: 594 STATSKSY-TFKAGDRVRFLGPSTSSLASLRAPPRGPATG 632
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 508 GPVVPPVSCWTPATVSP-TPCPSTRDTHSPTPS 603
G P S TP+T +P TP PST +PTPS
Sbjct: 277 GSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPS 309
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +3
Query: 495 ALAVRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 656
+L V G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1180 SLKVNGGQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = +1
Query: 496 LSLYGPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 600
L L GP PP S TP SP P P + SPTP
Sbjct: 227 LPLPGP--PPSSSPTPGPDSPLPSPGPPPSPSPTP 259
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +1
Query: 514 VVPPVSCWTPATVSPTPCPSTRDT-HSPTPSC 606
+ PP+SC TP PCP + HS T C
Sbjct: 645 IPPPLSCGTPVPSCQLPCPIPQPCGHSDTHGC 676
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 557 PHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 703
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 205 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 253
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 557 PHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRAGNR 703
PHRA RG R P +G R+ + P R++ +Y R +R
Sbjct: 213 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDR 261
>At2g42840.2 68415.m05305 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 520 PPVSCWTPATVSPTPCPSTRDTHSPTP 600
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At2g42840.1 68415.m05304 protodermal factor 1 (PDF1) identical to
protodermal factor 1 [Arabidopsis thaliana]
gi|4929130|gb|AAD33869
Length = 306
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 520 PPVSCWTPATVSPTPCPSTRDTHSPTP 600
PP TP+T S TP P T +H+PTP
Sbjct: 75 PPSHTPTPSTPSHTPTPHT-PSHTPTP 100
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 511 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 603
PV PP TP+ SPTP P + +PTPS
Sbjct: 96 PVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 125
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 511 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 603
PV PP TP+ SPTP P + +PTPS
Sbjct: 114 PVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 143
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 511 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 603
PV PP TP+ SPTP P + +PTPS
Sbjct: 132 PVSPPPPTPTPSVPSPTP-PVSPPPPTPTPS 161
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +1
Query: 511 PVVPPVSCWTPATVSPTPCPSTRDTHSPTP 600
PV PP TP+ SPTP T SP P
Sbjct: 150 PVSPPPPTPTPSVPSPTPPVPTDPMPSPPP 179
>At1g19950.1 68414.m02500 abscisic acid-responsive HVA22 family
protein weak similarity to SP|Q00765 Polyposis locus
protein 1 (TB2 protein) {Homo sapiens}; contains Pfam
profile PF03134: TB2/DP1, HVA22 family
Length = 315
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/74 (27%), Positives = 29/74 (39%)
Frame = +1
Query: 382 PVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYGPVVPPVSCWTPATVSPT 561
P L+T+ P++PK Q +T A Q L+ P PP P P
Sbjct: 191 PQLVTKEPISPKPLSSPRKQQQLQTETKEAKASVSQTKLTTLTPPGPP-----PPPPPPP 245
Query: 562 PCPSTRDTHSPTPS 603
P P+T + P+
Sbjct: 246 PSPTTAAKRNADPA 259
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 271 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 432
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +1
Query: 271 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 432
L++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 178 LSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 399 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRAL 500
GSP+ +G + E+D D + NI+H + +H + A+
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAM 127
>At4g36650.1 68417.m05201 transcription factor IIB (TFIIB) family
protein contains Pfam domain, PF00382: Transcription
factor TFIIB repeat
Length = 503
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +1
Query: 499 SLYGPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 609
S Y P VPP + T+S T + R P PS V
Sbjct: 320 SNYTPAVPPEKAFPTTTISTTRSTTPRAVDPPEPSFV 356
>At2g22470.1 68415.m02664 arabinogalactan-protein (AGP2) identical
to gi|3883122|gb|AAC77824; supported by cDNA
gi|3883121|gb|AF082299
Length = 131
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 517 VPPVSCWTPATVSPTPCPSTRDTHSPTPS 603
+PPV+ TP+ ++ P P T +PT S
Sbjct: 38 LPPVTAETPSPIASPPVPVNEPTPAPTTS 66
>At3g55320.1 68416.m06144 ABC transporter family protein similar to
multidrug resistant P-glycoprotein pmdr1 GI:4204793 from
[Solanum tuberosum]
Length = 1408
Score = 27.9 bits (59), Expect = 7.7
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = +3
Query: 495 ALAVRSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 656
+L + G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1181 SLKISGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVL-LDGRDLKLYNLRWL 1233
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,173,793
Number of Sequences: 28952
Number of extensions: 441771
Number of successful extensions: 1631
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1610
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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