Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0889
(782 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052970-1|AAH52970.1| 585|Homo sapiens YTH domain family, memb... 33 0.88
AK093081-1|BAC04046.1| 534|Homo sapiens protein ( Homo sapiens ... 33 0.88
AK056219-1|BAB71122.1| 543|Homo sapiens protein ( Homo sapiens ... 33 0.88
BC131590-1|AAI31591.1| 754|Homo sapiens EPS15L1 protein protein. 33 1.2
AF110265-1|AAF21930.1| 864|Homo sapiens epidermal growth factor... 33 1.2
AB015346-1|BAA88118.1| 864|Homo sapiens Eps15R protein. 33 1.2
U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulator... 32 2.7
M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulat... 32 2.7
M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promot... 32 2.7
BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfam... 32 2.7
BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfam... 32 2.7
Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex prot... 30 8.2
BC142684-1|AAI42685.1| 907|Homo sapiens deafness, autosomal rec... 30 8.2
BC142614-1|AAI42615.1| 907|Homo sapiens deafness, autosomal rec... 30 8.2
BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa prot... 30 8.2
AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa prot... 30 8.2
AL138895-4|CAI17247.1| 345|Homo sapiens deafness, autosomal rec... 30 8.2
AL138895-3|CAI17246.1| 907|Homo sapiens deafness, autosomal rec... 30 8.2
AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa prot... 30 8.2
AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa prot... 30 8.2
AK056190-1|BAB71117.1| 345|Homo sapiens protein ( Homo sapiens ... 30 8.2
AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein ... 30 8.2
AB040959-1|BAA96050.1| 963|Homo sapiens KIAA1526 protein protein. 30 8.2
>BC052970-1|AAH52970.1| 585|Homo sapiens YTH domain family, member
3 protein.
Length = 585
Score = 33.5 bits (73), Expect = 0.88
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 352 YSAAGVFGPSTTPFSTAAFGQPASTFNYFHGNGDYSTWGQLGRAKQ 489
+S G G +T PF GQ FN+F GN D+STWG G Q
Sbjct: 106 FSQPGALG-NTPPF----LGQHG--FNFFPGNADFSTWGTSGSQGQ 144
>AK093081-1|BAC04046.1| 534|Homo sapiens protein ( Homo sapiens
cDNA FLJ35762 fis, clone TESTI2004793, moderately
similar to Homo sapiens NY-REN-2 antigen mRNA. ).
Length = 534
Score = 33.5 bits (73), Expect = 0.88
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 352 YSAAGVFGPSTTPFSTAAFGQPASTFNYFHGNGDYSTWGQLGRAKQ 489
+S G G +T PF GQ FN+F GN D+STWG G Q
Sbjct: 55 FSQPGALG-NTPPF----LGQHG--FNFFPGNADFSTWGTSGSQGQ 93
>AK056219-1|BAB71122.1| 543|Homo sapiens protein ( Homo sapiens
cDNA FLJ31657 fis, clone NT2RI2004304, moderately
similar to Homo sapiens NY-REN-2 antigen mRNA. ).
Length = 543
Score = 33.5 bits (73), Expect = 0.88
Identities = 20/46 (43%), Positives = 24/46 (52%)
Frame = +1
Query: 352 YSAAGVFGPSTTPFSTAAFGQPASTFNYFHGNGDYSTWGQLGRAKQ 489
+S G G +T PF GQ FN+F GN D+STWG G Q
Sbjct: 106 FSQPGALG-NTPPF----LGQHG--FNFFPGNADFSTWGTSGSQGQ 144
>BC131590-1|AAI31591.1| 754|Homo sapiens EPS15L1 protein protein.
Length = 754
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 316 PSYAPPISSADPYSAAGVFGPSTTPFSTA-AFGQPASTFNYFHGNGDYS 459
PS P S+DP+S++ V + PF T FG + +FN G D+S
Sbjct: 699 PSKLDPFESSDPFSSSSVSSKGSDPFGTLDPFG--SGSFNSAEGFADFS 745
>AF110265-1|AAF21930.1| 864|Homo sapiens epidermal growth factor
receptor substrate EPS15R protein.
Length = 864
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 316 PSYAPPISSADPYSAAGVFGPSTTPFSTA-AFGQPASTFNYFHGNGDYS 459
PS P S+DP+S++ V + PF T FG + +FN G D+S
Sbjct: 699 PSKLDPFESSDPFSSSSVSSKGSDPFGTLDPFG--SGSFNSAEGFADFS 745
>AB015346-1|BAA88118.1| 864|Homo sapiens Eps15R protein.
Length = 864
Score = 33.1 bits (72), Expect = 1.2
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 316 PSYAPPISSADPYSAAGVFGPSTTPFSTA-AFGQPASTFNYFHGNGDYS 459
PS P S+DP+S++ V + PF T FG + +FN G D+S
Sbjct: 699 PSKLDPFESSDPFSSSSVSSKGSDPFGTLDPFG--SGSFNSAEGFADFS 745
>U60477-1|AAB09475.1| 414|Homo sapiens apoliprotein AI regulatory
protein-1 protein.
Length = 414
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +1
Query: 277 DELAEVPWRHQQQPSYAPPISSADPYS-----AAGVFGPSTTPFSTAAFGQ 414
D EVP Q S APP+ P + G GP++TP TAA GQ
Sbjct: 10 DPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQ 60
>M64497-1|AAA86429.1| 414|Homo sapiens apolipoprotein AI regulatory
protein-1 protein.
Length = 414
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +1
Query: 277 DELAEVPWRHQQQPSYAPPISSADPYS-----AAGVFGPSTTPFSTAAFGQ 414
D EVP Q S APP+ P + G GP++TP TAA GQ
Sbjct: 10 DPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQ 60
>M62760-1|AAA21479.1| 351|Homo sapiens ovalbumin upstream promoter
transcription factor II protein.
Length = 351
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +1
Query: 277 DELAEVPWRHQQQPSYAPPISSADPYS-----AAGVFGPSTTPFSTAAFGQ 414
D EVP Q S APP+ P + G GP++TP TAA GQ
Sbjct: 10 DPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQ 60
>BC042897-1|AAH42897.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +1
Query: 277 DELAEVPWRHQQQPSYAPPISSADPYS-----AAGVFGPSTTPFSTAAFGQ 414
D EVP Q S APP+ P + G GP++TP TAA GQ
Sbjct: 10 DPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQ 60
>BC014664-1|AAH14664.1| 414|Homo sapiens nuclear receptor subfamily
2, group F, member 2 protein.
Length = 414
Score = 31.9 bits (69), Expect = 2.7
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = +1
Query: 277 DELAEVPWRHQQQPSYAPPISSADPYS-----AAGVFGPSTTPFSTAAFGQ 414
D EVP Q S APP+ P + G GP++TP TAA GQ
Sbjct: 10 DPQDEVPGSQGSQASQAPPVPGPPPGAPHTPQTPGQGGPASTPAQTAAGGQ 60
>Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex protein
hnup153 protein.
Length = 1475
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 337 SSADPYSAAGVFGPSTTPFSTAAFGQPAST 426
SS++P A VFG S+ P S++AFG A +
Sbjct: 1217 SSSNPPVATFVFGQSSNPVSSSAFGNTAES 1246
>BC142684-1|AAI42685.1| 907|Homo sapiens deafness, autosomal
recessive 31 protein.
Length = 907
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 346 DPYSAAGVFGPSTTPFSTAAFGQPAS 423
D Y+A G++ P+TTP+ A+G P S
Sbjct: 107 DQYTAEGLYLPATTPYRQPAWGGPDS 132
>BC142614-1|AAI42615.1| 907|Homo sapiens deafness, autosomal
recessive 31 protein.
Length = 907
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 346 DPYSAAGVFGPSTTPFSTAAFGQPAS 423
D Y+A G++ P+TTP+ A+G P S
Sbjct: 107 DQYTAEGLYLPATTPYRQPAWGGPDS 132
>BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 337 SSADPYSAAGVFGPSTTPFSTAAFGQPAST 426
SS++P A VFG S+ P S++AFG A +
Sbjct: 1217 SSSNPPVATFVFGQSSNPVSSSAFGNTAES 1246
>AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 337 SSADPYSAAGVFGPSTTPFSTAAFGQPAST 426
SS++P A VFG S+ P S++AFG A +
Sbjct: 1217 SSSNPPVATFVFGQSSNPVSSSAFGNTAES 1246
>AL138895-4|CAI17247.1| 345|Homo sapiens deafness, autosomal
recessive 31 protein.
Length = 345
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 346 DPYSAAGVFGPSTTPFSTAAFGQPAS 423
D Y+A G++ P+TTP+ A+G P S
Sbjct: 107 DQYTAEGLYLPATTPYRQPAWGGPDS 132
>AL138895-3|CAI17246.1| 907|Homo sapiens deafness, autosomal
recessive 31 protein.
Length = 907
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 346 DPYSAAGVFGPSTTPFSTAAFGQPAS 423
D Y+A G++ P+TTP+ A+G P S
Sbjct: 107 DQYTAEGLYLPATTPYRQPAWGGPDS 132
>AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 337 SSADPYSAAGVFGPSTTPFSTAAFGQPAST 426
SS++P A VFG S+ P S++AFG A +
Sbjct: 1217 SSSNPPVATFVFGQSSNPVSSSAFGNTAES 1246
>AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 337 SSADPYSAAGVFGPSTTPFSTAAFGQPAST 426
SS++P A VFG S+ P S++AFG A +
Sbjct: 1217 SSSNPPVATFVFGQSSNPVSSSAFGNTAES 1246
>AK056190-1|BAB71117.1| 345|Homo sapiens protein ( Homo sapiens
cDNA FLJ31628 fis, clone NT2RI2003344, weakly similar to
PRESYNAPTIC PROTEIN SAP97. ).
Length = 345
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 346 DPYSAAGVFGPSTTPFSTAAFGQPAS 423
D Y+A G++ P+TTP+ A+G P S
Sbjct: 107 DQYTAEGLYLPATTPYRQPAWGGPDS 132
>AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein
protein.
Length = 1455
Score = 30.3 bits (65), Expect = 8.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +1
Query: 337 SSADPYSAAGVFGPSTTPFSTAAFGQPAST 426
SS++P A VFG S+ P S++AFG A +
Sbjct: 1197 SSSNPPVATFVFGQSSNPVSSSAFGNTAES 1226
>AB040959-1|BAA96050.1| 963|Homo sapiens KIAA1526 protein protein.
Length = 963
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 346 DPYSAAGVFGPSTTPFSTAAFGQPAS 423
D Y+A G++ P+TTP+ A+G P S
Sbjct: 163 DQYTAEGLYLPATTPYRQPAWGGPDS 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,805,142
Number of Sequences: 237096
Number of extensions: 2364052
Number of successful extensions: 5931
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5909
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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